Boutique Hotels in Japan from ¥18,352
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Pick from 88 Japan Boutique Hotels with updated room rates, reviews, and availability. Most hotels are fully refundable.
Our top choices for Japan boutique hotels

The Screen
The Screen
9.2 out of 10, Wonderful, (301)
The price is ¥20,082
¥24,299 total
Sep 3 - Sep 4

Hotel Kanra Kyoto
Hotel Kanra Kyoto
9.6 out of 10, Exceptional, (1003)
The price is ¥34,711
¥42,000 total
Sep 1 - Sep 2

The Capitol Hotel Tokyu
The Capitol Hotel Tokyu
9.8 out of 10, Exceptional, (1000)
The price is ¥79,103
¥100,066 total
Sep 1 - Sep 2

Solaria Nishitetsu Hotel Ginza
Solaria Nishitetsu Hotel Ginza
9.0 out of 10, Wonderful, (1006)
The price is ¥22,038
¥24,696 total
Sep 7 - Sep 8

The Peninsula Tokyo
The Peninsula Tokyo
9.4 out of 10, Exceptional, (1007)
The price is ¥80,000
¥101,600 total
Sep 2 - Sep 3

Akan Tsuruga Bessou HINANOZA
Akan Tsuruga Bessou HINANOZA
9.4 out of 10, Exceptional, (84)
The price is ¥79,121
¥99,041 total
Sep 3 - Sep 4

Gagakuan
Gagakuan
10.0 out of 10, Exceptional, (28)

Hotel Chinzanso Tokyo
Hotel Chinzanso Tokyo
9.6 out of 10, Exceptional, (1016)
The price is ¥34,363
¥45,634 total
Sep 1 - Sep 2
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
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Top destinations for Boutique Hotels in Japan
- Boutique Hotels in Osaka Prefecture
- Boutique Hotels in Hokkaido Prefecture
- Boutique Hotels in Tokyo Prefecture
- Boutique Hotels in Okinawa Prefecture
- Boutique Hotels in Kyoto Prefecture
- Boutique Hotels in Nagano Prefecture
- Boutique Hotels in Fukuoka Prefecture
- Boutique Hotels in Kanagawa Prefecture
- Boutique Hotels in Shiga Prefecture
- Boutique Hotels in Yamanashi Prefecture
- Boutique Hotels in Mie Prefecture
- Boutique Hotels in Gunma Prefecture
- Boutique Hotels in Tochigi Prefecture
- Boutique Hotels in Kagawa Prefecture
- Boutique Hotels in Aichi Prefecture
- Boutique Hotels in Hyogo Prefecture
- Boutique Hotels in Fukui Prefecture
- Boutique Hotels in Saitama Prefecture
- Boutique Hotels in Fukushima Prefecture
- Boutique Hotels in Ibaraki Prefecture
- Boutique Hotels in Wakayama Prefecture
- Boutique Hotels in Gifu Prefecture
- Boutique Hotels in Yamaguchi Prefecture
- Boutique Hotels in Hiroshima Prefecture
More Hotel Options in Japan
- Hotels with WiFi in Japan
- Hotels with Free Parking in Japan
- Business Hotels in Japan
- Historic Hotels in Japan
- Shopping Hotels in Japan
- Resorts & Hotels with Spas in Japan
- Family Hotels in Japan
- Hotels with smoking rooms in Japan
- Hotels with Bars in Japan
- Adventure Hotels in Japan
- Beach Hotels in Japan
- Ski Hotels in Japan
- Cheap Hotels in Japan
- Hotels with Hot Tubs in Japan
- Golf Hotels in Japan
- Hotels with a Pool in Japan
- Hotel with a Concierge in Japan
- Hotel Wedding Venues in Japan
- Luxury Hotels in Japan
- Romantic Hotels in Japan
More Themes
- All-inclusive Hotel
- Hotels with Bars
- Beach Hotels
- Cheap Hotels
- Business Hotels
- Casinos
- Hotel with a Concierge
- Family Hotels
- Hotels with Free Parking
- Golf Hotels
- Historic Hotels
- Hotels with Hot Tubs
- Hotels with an Indoor Pool
- Apartment Hotel
- Hotels with a Lazy River
- Gay friendly Hotels
- Luxury Hotels
- Pet-friendly Hotels
- Hotels with a Pool
- Adventure Hotels
- Romantic Hotels
- Shopping Hotels
- Ski Hotels
- Hotels with smoking rooms
- Resorts & Hotels with Spas
- Green Hotels
- Waterpark Hotels
- Hotels with Waterslides
- Hotel Wedding Venues
- Hotels with WiFi
- Winery Hotels
Stay near popular Japan attractions
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