Find Boutique Hotels in Kyoto

Most hotels are fully refundable. Because flexibility matters.

Save an average of 15% on thousands of hotels with Expedia Rewards.

Search over 2.9 million properties and 550 airlines worldwide

Find properties with these dates

Pick from 19 Kyoto Boutique Hotels and compare room rates, reviews, and availability. Most hotels are fully refundable.

Interior detail
Gagakuan
4.0 star property
10.0 out of 10, Exceptional, (28)
"Spent four days at Gagakuan, satisfied, although unexpected cold weather even in spring. Late sakura blooming, still managed to view some. Did not follow tour, rather venture on our own. Visited places of interest but unable to cover all due to insufficient time, maybe next time would to come again. "
Gagakuan
River view room with Tatami area 301 | In-room safe, free WiFi, bed sheets
Aoi Hotel Kyoto
4.0 star property
9.8 out of 10, Exceptional, (122)
"Room was very nice! "
The price is ¥34,167
per night
May 20 - May 21
Aoi Hotel Kyoto
Suite Annex Building(103 square meter) | Premium bedding, down comforters, memory foam beds, in-room safe
Hotel Kanra Kyoto
4.0 star property
9.6 out of 10, Exceptional, (1006)
"Best hotel I’ve ever stayed at. Everything was so clean and the hotel is gorgeous. The staff was super friendly and even recommended places nearby to visit. 10/10 "
The price is ¥30,992
per night
May 28 - May 29
Hotel Kanra Kyoto
Front of property - evening/night
Villa Sanjo Muromachi Kyoto
4.0 star property
9.6 out of 10, Exceptional, (264)
"Lovely boutique hotel. Away from the hustle and bustle, but an easy walk to endless shopping and dining. "
The price is ¥29,364
per night
May 13 - May 14
Villa Sanjo Muromachi Kyoto
Exterior
Hotel The Celestine Kyoto Gion
4.0 star property
9.4 out of 10, Exceptional, (757)
"We really enjoyed our stay at The Celestine. The service was great, the room clean and comfortable and the breakfast was amazing. Would definitely recommend this hotel and would stay again when next in Kyoto. "
The price is ¥32,654
per night
Jun 11 - Jun 12
Hotel The Celestine Kyoto Gion
Interior entrance
Noku Kyoto
4.0 star property
9.2 out of 10, Wonderful, (859)
"It was great! Staff and service were wonderful"
The price is ¥13,909
per night
Jun 4 - Jun 5
Noku Kyoto
Individually decorated, individually furnished, free WiFi, bed sheets
Sakura Terrace The Gallery
3.0 star property
9.2 out of 10, Wonderful, (1004)
"Excellent location by Kyoto station. Fab lobby area with plenty of nooks to relax, fix a hot drink at the coffee and tea bar or head to the south building lobby to enjoy the massage chairs. Great breakfast with a lot of options. Lovely staff. Loved the happy hour drink. Room basic and lacked character but nice to have a balcony. "
The price is ¥13,159
per night
May 13 - May 14
Sakura Terrace The Gallery
Lobby
Mitsui Garden Hotel Kyoto Shinmachi Bettei
4.0 star property
9.2 out of 10, Wonderful, (1001)
"Quiet Good location"
The price is ¥16,207
per night
Jun 12 - Jun 13
Mitsui Garden Hotel Kyoto Shinmachi Bettei
Suite, Non Smoking (Premium Floor) | Down comforters, in-room safe, desk, blackout drapes
The Royal Park Hotel Kyoto Sanjo
4.0 star property
9.2 out of 10, Wonderful, (1009)
"Great stay, would definitely recommend."
The price is ¥20,494
per night
May 21 - May 22
The Royal Park Hotel Kyoto Sanjo
Premium bedding, down comforters, minibar, in-room safe
Hotel Okura Kyoto
4.5 star property
9.2 out of 10, Wonderful, (1002)
"The staff was wonderful. At first i was hesitant for an upgraded room by front desk but took it and the view was stunning and did not disappoint of the Eastern part of town as well the Kamo River. The subway station is directly under the hotel so if you need to catch a subway train or need to get off at a station near you, it will be conveniently under your hotel which also doubles as a shopping mall and connects to the shops underground in the subway station. It is literally a 15 min walk to...
The price is ¥19,091
per night
Jun 10 - Jun 11
Hotel Okura Kyoto
Don't see what you're looking for?
See all available properties in Kyoto
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Frequently asked questions

Searching for a cozy accommodation for your visit to Kyoto?
If you want to find a small hotel with top-notch service, a personal feel, and good ambiance, a boutique hotel may be exactly what you want. Choose from 19 boutique accommodations in Kyoto to find a property that characterizes the uniqueness of this destination.
What's the best boutique-style accommodation in Kyoto?
Hotel Kanra Kyoto is a favorite hotel with our travelers looking for a stylish accommodation, and features 68 guestrooms, a full-service spa, and massages. If you want to stay at a boutique hotel, you might also want to look at The Screen.
How many boutique hotels will I find in Kyoto?
Expedia has 19 boutique hotels in Kyoto.
What's there to see and do in Kyoto?
Visitors speak positively about this destination’s cultural attractions, temples, and interesting historical sites. Major sights and activities around Kyoto include Nishiki Market, Kawaramachi Street, and Kiyomizu Temple. You might also want to see spots like Fushimi Inari Shrine, Honnoji Temple, and Kiyamachi Street during your trip.
#### When Should I Plan a Trip to Kyoto?\n
If you’re wondering about the local weather, use this info to plan your Kyoto getaway:
What's the best way to get to my boutique hotel in Kyoto?
You have a few options for traveling to and around Kyoto. The closest major airport is Itami Airport (ITM), which is located 24 mi (38.6 km) away. Walk to nearby metro stations like Shiyakusho-mae Station, Sanjo Keihan Station, and Karasuma Oike Station.