Boutique Hotels in Japan from ¥25,384
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Check availability on Japan Boutique Hotels
Pick from 88 Japan Boutique Hotels with updated room rates, reviews, and availability. Most hotels are fully refundable.

The Screen
Downtown Kyoto
9.2 out of 10, Wonderful, (325)
The price is ¥27,977
¥33,853 total
Dec 22 - Dec 23

Hotel Kanra Kyoto
Shimogyo Ward
9.6 out of 10, Exceptional, (1014)
The price is ¥33,549
¥40,594 total
Dec 14 - Dec 15

The Capitol Hotel Tokyu
Chiyoda
9.8 out of 10, Exceptional, (1000)
The price is ¥76,493
¥96,763 total
Jan 3 - Jan 4, 2026

Solaria Nishitetsu Hotel Ginza
Ginza
9.0 out of 10, Wonderful, (1015)
The price is ¥33,794
¥37,508 total
Jan 2 - Jan 3, 2026

The Peninsula Tokyo
Chiyoda
9.4 out of 10, Exceptional, (1001)
The price is ¥117,000
¥148,405 total
Dec 11 - Dec 12

Akan Tsuruga Bessou HINANOZA
Kushiro
9.4 out of 10, Exceptional, (86)
The price is ¥83,701
¥103,201 total
Dec 7 - Dec 8

Gagakuan
Shimogyo Ward
10.0 out of 10, Exceptional, (28)

Hotel Chinzanso Tokyo
Bunkyo
9.8 out of 10, Exceptional, (1081)
The price is ¥41,624
¥55,213 total
Dec 4 - Dec 5
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
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Top Japan Hotel Reviews

Hotel Villa Fontaine Grand Haneda Airport
10/10 Excellent
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Top destinations for Boutique Hotels in Japan
- Boutique Hotels in Tokyo Prefecture
- Boutique Hotels in Hokkaido Prefecture
- Boutique Hotels in Osaka Prefecture
- Boutique Hotels in Fukuoka Prefecture
- Boutique Hotels in Okinawa Prefecture
- Boutique Hotels in Kanagawa Prefecture
- Boutique Hotels in Kyoto Prefecture
- Boutique Hotels in Shiga Prefecture
- Boutique Hotels in Nagano Prefecture
- Boutique Hotels in Saitama Prefecture
- Boutique Hotels in Mie Prefecture
- Boutique Hotels in Yamanashi Prefecture
- Boutique Hotels in Gunma Prefecture
- Boutique Hotels in Aichi Prefecture
- Boutique Hotels in Tochigi Prefecture
- Boutique Hotels in Hyogo Prefecture
- Boutique Hotels in Kagawa Prefecture
- Boutique Hotels in Ibaraki Prefecture
- Boutique Hotels in Hiroshima Prefecture
- Boutique Hotels in Gifu Prefecture
- Boutique Hotels in Nara Prefecture
- Boutique Hotels in Oita Prefecture
- Boutique Hotels in Wakayama Prefecture
- Boutique Hotels in Fukui Prefecture
More Hotel Options in Japan
- Hotels with WiFi in Japan
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- Business Hotels in Japan
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- Resorts & Hotels with Spas in Japan
- Family Hotels in Japan
- Hotels with smoking rooms in Japan
- Hotels with Bars in Japan
- Adventure Hotels in Japan
- Beach Hotels in Japan
- Ski Hotels in Japan
- Cheap Hotels in Japan
- Hotels with Hot Tubs in Japan
- Golf Hotels in Japan
- Hotels with a Pool in Japan
- Hotel with a Concierge in Japan
- Hotel Wedding Venues in Japan
- Luxury Hotels in Japan
- Romantic Hotels in Japan
More Themes
- All-inclusive Hotel
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- Beach Hotels
- Cheap Hotels
- Business Hotels
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- Hotel with a Concierge
- Family Hotels
- Hotels with Free Parking
- Golf Hotels
- Historic Hotels
- Hotels with Hot Tubs
- Hotels with an Indoor Pool
- Apartment Hotel
- Hotels with a Lazy River
- Gay friendly Hotels
- Luxury Hotels
- Pet-friendly Hotels
- Hotels with a Pool
- Adventure Hotels
- Romantic Hotels
- Shopping Hotels
- Ski Hotels
- Hotels with smoking rooms
- Resorts & Hotels with Spas
- Green Hotels
- Waterpark Hotels
- Hotels with Waterslides
- Hotel Wedding Venues
- Hotels with WiFi
- Winery Hotels
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![[East] Deluxe Double Room with Jacuzzi, Non Smoking | Down comforters, minibar, desk, iron/ironing board](https://images.trvl-media.com/lodging/10000000/9360000/9358800/9358768/658298a8.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium)
![[East] Superior Twin Room with Open-Air Bath, Non Smoking | Down comforters, minibar, desk, iron/ironing board](https://images.trvl-media.com/lodging/10000000/9360000/9358800/9358768/7774c22e.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium)








