Photo by Rebecca Friedland

Find hotels in Mission Bay, San Francisco from ¥10,827

    Plan, book, stay with confidence
    bex rewards loyalty icon
    Be picky
    Search almost a million properties worldwide
    payments icon
    Treat yourself
    Sign in to save 10% or more on thousands of hotels
    today icon
    Change your mind
    Book hotels with free cancellation

Find properties with these dates

Filter by

Popular filters
Popular filters
Price per night
Guest rating
Guest rating
Star rating
Payment type
Payment type
Property type
Property type
Neighborhood
Neighborhood
Popular locations
Popular locations
Meal plans available
Meal plans available
Amenities
Amenities
Accessibility
Accessibility
Traveler experience
Traveler experience

Discover 4,892 Mission Bay hotels and places to stay, with room rates, reviews, and availability. Most hotels are fully refundable.

Breakfast, lunch and dinner served
The Jay, Autograph Collection
4.0 star property
9.8 out of 10, Exceptional, (67)
"The decor and design of this hotel was perfection! "
The price is ¥50,317
¥58,716 total
includes taxes & fees
Jun 8 - Jun 9
The Jay, Autograph Collection
Exterior
LUMA Hotel San Francisco
4.0 star property
9.4 out of 10, Exceptional, (1104)
"We love the property, the room and the amenities. The service was incredible, the only thing missing is a proper restaurant. The bar at the top has great food, but we had 2 kids with us. We still had a great time and food, but a proper restaurant would have been nice. "
The price is ¥28,824
¥33,637 total
includes taxes & fees
May 24 - May 25
LUMA Hotel San Francisco
City view
Taj Campton Place
5.0 star property
9.2 out of 10, Wonderful, (1002)
"Excellent Customer Service A "
The price is ¥23,870
¥33,243 total
includes taxes & fees
May 31 - Jun 1
Taj Campton Place
Save an average of 15% on thousands of hotels when you're signed in
Breakfast, lunch, dinner served; Filipino cuisine
Kimpton Alton Hotel - Fisherman's Wharf, an IHG Hotel
4.5 star property
9.0 out of 10, Wonderful, (999)
"Was not expecting MANDATORY $70 a day valet parking "
The price is ¥22,966
¥33,200 total
includes taxes & fees
May 27 - May 28
Kimpton Alton Hotel - Fisherman's Wharf, an IHG Hotel
Lobby sitting area
The Dylan at SFO
3.0 star property
9.0 out of 10, Wonderful, (1366)
"Wonderful staff, responsive, helpful! Stayed one night each flying into and out of SFO. Love the refurbished look. Comfortable clean rooms. Will stay again! "
The price is ¥14,703
¥16,871 total
includes taxes & fees
May 19 - May 20
The Dylan at SFO
Lobby sitting area
Hotel Riu Plaza Fisherman's Wharf
4.0 star property
8.8 out of 10, Excellent, (6202)
"Hotel is in a great location, with onsite parking, however $40 to park for hotel guests per day is excessive in my opinion. The location is great for walking to attractions like Pier 39 and the Alcatraz ferry. Breakfast was amazing with alot of selection! It gets very busy though, so get there early. The only real negative comment is that I had to fight to get them to honor my Expedia VIP benefit for a parking credit, and as of yet, i still have not received a credit back on my Visa. ...
The price is ¥21,610
¥30,495 total
includes taxes & fees
May 28 - May 29
Hotel Riu Plaza Fisherman's Wharf
Outdoor pool, open 9:00 AM to 7:00 PM, sun loungers
Holiday Inn Golden Gateway, an IHG Hotel
3.5 star property
8.8 out of 10, Excellent, (2539)
"Gre"
The price is ¥20,935
¥24,430 total
includes taxes & fees
May 28 - May 29
Holiday Inn Golden Gateway, an IHG Hotel
Exterior
Hotel Aluxor SFO
2.5 star property
8.8 out of 10, Excellent, (1029)
"Surprisingly Nice"
The price is ¥15,623
¥18,825 total
includes taxes & fees
Jun 2 - Jun 3
Hotel Aluxor SFO
Exterior
Handlery Union Square Hotel
3.5 star property
8.8 out of 10, Excellent, (1863)
"Great place to stay! It’s a bit of a maze to get to your room but rooms are nice, clean and comfortable. Bed was a little too firm for our liking. Room service comes around early so if you want to sleep in put the DND on the door. Staff is so nice and very helpful! Highly recommend and would stay there again! Prices our great too!!!"
The price is ¥21,716
¥25,342 total
includes taxes & fees
May 20 - May 21
Handlery Union Square Hotel
Front of property - evening/night
Golden Gate Hotel
3.0 star property
8.8 out of 10, Excellent, (250)
"This is a very cute, quaint, historic facility with a lot of charm and great staff. It has its compromises—the floors squeak, the room had a window but no AC, and I am sure I missed a disclosure but it turns out I booked a room with a shared toilet and shower down the hall. For the price, it was great, and for the age and design of the building, the owners have done a great job keeping it up. Everything was clean and well-cared-for in its old world way. "
The price is ¥13,209
¥15,415 total
includes taxes & fees
May 21 - May 22
Golden Gate Hotel
Interior entrance
Hotel Aura SFO
3.0 star property
8.8 out of 10, Excellent, (1650)
"Really liked this small hotel, which is a short drive to SFO. The room was well appointed, beds were very comfortable, everything was very clean, and the staff was great. I especially appreciated that I could park my car there for only $15/day while on a week long trip."
The price is ¥16,732
¥19,980 total
includes taxes & fees
Jun 2 - Jun 3
Hotel Aura SFO
Lobby sitting area
InterContinental Mark Hopkins, an IHG Hotel
4.0 star property
8.8 out of 10, Excellent, (1003)
"Clean and good condition. "
The price is ¥29,442
¥39,649 total
includes taxes & fees
Jun 2 - Jun 3
InterContinental Mark Hopkins, an IHG Hotel
Interior
Hotel Shattuck Plaza
4.0 star property
8.8 out of 10, Excellent, (1004)
"Beautiful hotel. Extremely friendly staff and close to shopping, restaurants and the BART. "
The price is ¥23,747
¥26,880 total
includes taxes & fees
May 26 - May 27
Hotel Shattuck Plaza
Breakfast and dinner served
Hotel Zelos San Francisco
4.0 star property
8.8 out of 10, Excellent, (1003)
"Exceptional staff and service"
The price is ¥20,189
¥29,775 total
includes taxes & fees
May 25 - May 26
Hotel Zelos San Francisco
Lobby
Staypineapple, An Elegant Hotel, Union Square
4.0 star property
8.8 out of 10, Excellent, (1001)
"Love the theme! "
The price is ¥13,865
¥22,546 total
includes taxes & fees
May 27 - May 28
Staypineapple, An Elegant Hotel, Union Square
Terrace/patio
Hyatt Centric Fisherman's Wharf San Francisco
4.0 star property
8.6 out of 10, Excellent, (1404)
"Amazing!"
The price is ¥23,747
¥34,079 total
includes taxes & fees
May 20 - May 21
Hyatt Centric Fisherman's Wharf San Francisco
Suite, 1 Bedroom, Kitchen | Private kitchen | Coffee/tea maker, eco-friendly cleaning products
Executive Hotel Vintage Court
3.0 star property
8.6 out of 10, Excellent, (1004)
"I liked location a lot. Very restricred view. Not good wifi. Excellent personal service"
The price is ¥16,990
¥23,798 total
includes taxes & fees
May 27 - May 28
Executive Hotel Vintage Court
Interior entrance
Cow Hollow Inn & Suites
2.0 star property
8.6 out of 10, Excellent, (1520)
"Good hotel with a good location right next to the shopping/restaurant district of Chestnut Street. Prices very wildly from $90 a night to $260 a night. Well worth $90 a night but not worth $260 a night. They have free parking, which is very nice to offer. "
The price is ¥20,436
¥23,565 total
includes taxes & fees
May 15 - May 16
Cow Hollow Inn & Suites
Exterior
Hyatt Regency San Francisco Airport
4.0 star property
8.6 out of 10, Excellent, (1222)
"Very clean "
The price is ¥21,372
¥24,452 total
includes taxes & fees
May 19 - May 20
Hyatt Regency San Francisco Airport
Bar (on property)
DoubleTree by Hilton San Francisco South Airport Blvd
4.0 star property
8.4 out of 10, Very Good, (1570)
"convinced "
The price is ¥19,788
¥23,285 total
includes taxes & fees
May 25 - May 26
DoubleTree by Hilton San Francisco South Airport Blvd
Don't see what you're looking for?
See all available properties in Mission Bay
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Other neighborhoods around Mission Bay

Hotels in top San Francisco neighborhoods Learn more about Mission Bay

Mission Bay hotels information

Number of reviews
27,352
Accommodation
4,892 hotels
Lowest Price
¥10,827
Highest Price
¥50,317

Frequently asked questions

What is Mission Bay like?

Travelers will be sure to enjoy their time in San Francisco's Mission Bay neighborhood. Looking for sights you might find in a travel guide about Mission Bay? Consider a visit to Chase Center while you're in the neighborhood.

Where is the best place to stay in Mission Bay?

Based on Expedia customer reviews, LUMA Hotel San Francisco is the highest ranked property in Mission Bay. This hotel is a short 5-minute walk from Oracle Park, and it offers a restaurant and a fitness center.

How many hotels are there in Mission Bay?

When you want to kick up your feet after a day of exploring the sights in San Francisco, you can choose from 14 Expedia hotels and other accommodations in Mission Bay.

If I need to cancel my hotel reservation in Mission Bay, will I receive a refund?

Yes! The majority of hotel room reservations are fully refundable if you cancel prior to the accommodation's cancellation deadline, which often is within 24-48 hours of your check-in date. If your reservation is non-refundable, you may still be able to cancel and receive a refund within a 24-hour period of booking. Put your dates in and click on "Search", then filter by "fully refundable" to get the best deals in Mission Bay.

Where can I learn more about changing or cancelling my trip to Mission Bay?

To access more information about changing or cancelling your trip to Mission Bay, head over to our customer service page.

What are the top things to see and do in Mission Bay?

Chase Center, Mission Creek Park, and Lefty O'Doul Bridge are just a few attractions to check out in Mission Bay. While you're out sightseeing, Oracle Park and Pier 39 are a couple of additional sights to visit in San Francisco.

How can I get around Mission Bay and the greater San Francisco area?

For a quick way to explore the city, catch a ride on metro transit at UCSF/Chase Center Stop, Mission Rock Station, or UCSF Mission Bay Stop. To venture out of town, take a train from San Francisco Station.

Recent reviews of Mission Bay hotels