Mission Bay Vacations

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  • Better together

    Save up to ¥109,000 when you book a flight and hotel together*
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    With over 300,000 hotels worldwide, it's easy to create a perfect package
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    Plan, book, and manage your trip all in one place
Price found within the past 48 hours. Click for updated prices.
  • Jul 2 - Jul 16

    The Marker Union Square San Francisco + Flight

    Union Square
    14 nights
    4.0 star property
    9.2/10 - Wonderful (1,298 reviews)
    "Our stay was great. Staff was friendly and helpful and the hotel was very clean. I would definitely recommend! I enjoyed out stay and loved San Francisco!"
    Reviewed May 21, 2026
    Roundtrip Tokyo (HND) - San Francisco (SFO)
    HND - SFONonstop SFO - HNDNonstop
    ¥551,959
    ¥399,628
    per traveler
    found 13 hours ago
    The Marker Union Square San Francisco
  • Jul 2 - Jul 16

    Stanford Court San Francisco + Flight

    Downtown San Francisco
    14 nights
    4.0 star property
    9.0/10 - Wonderful (1,399 reviews)
    "Good for short stay."
    Reviewed May 22, 2026
    Roundtrip Tokyo (HND) - San Francisco (SFO)
    HND - SFONonstop SFO - HNDNonstop
    Save 100% on your flight
    ¥656,876
    ¥410,491
    per traveler
    found 13 hours ago
    Stanford Court San Francisco
  • Jul 2 - Jul 16

    The Huntington Hotel + Flight

    Downtown San Francisco
    14 nights
    5.0 star property
    9.0/10 - Wonderful (17 reviews)
    Roundtrip Tokyo (HND) - San Francisco (SFO)
    HND - SFONonstop SFO - HNDNonstop
    Save 100% on your flight
    ¥1,291,987
    ¥846,358
    per traveler
    found 13 hours ago
    The Huntington Hotel
  • Jul 2 - Jul 16

    1 Hotel San Francisco + Flight

    Downtown San Francisco
    14 nights
    5.0 star property
    9.2/10 - Wonderful (549 reviews)
    Roundtrip Tokyo (HND) - San Francisco (SFO)
    HND - SFONonstop SFO - HNDNonstop
    Save 100% on your flight
    ¥1,153,241
    ¥760,036
    per traveler
    found 13 hours ago
    1 Hotel San Francisco
  • Jul 2 - Jul 16

    Hotel Riu Plaza Fisherman's Wharf + Flight

    Fisherman's Wharf
    14 nights
    4.0 star property
    9.0/10 - Wonderful (7,479 reviews)
    "Breakfast was good"
    Reviewed May 23, 2026
    Roundtrip Tokyo (HND) - San Francisco (SFO)
    HND - SFONonstop SFO - HNDNonstop
    ¥694,391
    ¥460,467
    per traveler
    found 13 hours ago
    Hotel Riu Plaza Fisherman's Wharf

Where to stay in Mission Bay

Find the best Mission Bay areas and neighborhoods for the activities you enjoy most. Learn more about Mission Bay

Mission Bay Hotel Deals

LUMA Hotel San Francisco

LUMA Hotel San Francisco

4 out of 5
100 Channel Street San Francisco CA
The price is ¥36,452 per night from Jun 7 to Jun 8
¥36,452
¥42,902 total
Jun 7 - Jun 8
includes taxes & fees
9.6/10 Exceptional! (2,498 reviews)
"Great place."

Reviewed on May 23, 2026

LUMA Hotel San Francisco
Hotel Riu Plaza Fisherman's Wharf

Hotel Riu Plaza Fisherman's Wharf

4 out of 5
2500 Mason St San Francisco CA
Fully refundableReserve now, pay when you stay
The price is ¥24,934 per night from May 25 to May 26
¥24,934
¥35,904 total
May 25 - May 26
includes taxes & fees
9/10 Wonderful! (7,479 reviews)
"Breakfast was good"

Reviewed on May 23, 2026

Hotel Riu Plaza Fisherman's Wharf
Hilton San Francisco Financial District

Hilton San Francisco Financial District

4 out of 5
750 Kearny St San Francisco CA
The price is ¥19,030 per night from May 31 to Jun 1
¥19,030
¥22,397 total
May 31 - Jun 1
includes taxes & fees
8.8/10 Excellent! (2,795 reviews)
"I stayed at Hilton Financial District in San Francisco with my family of four. We arrived around midday, and I do appreciate that the staff accommodated an early check-in by 1:30 PM, which was helpful after travel. However, I was quite surprised and disappointed to learn that our booking (made through ..."

Reviewed on May 23, 2026

Hilton San Francisco Financial District
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Frequently asked questions

How much does a Mission Bay vacation package cost?
Custom make your Mission Bay vacation package from as low as . Pick from any combination of hotels, flights and rental cars to build the getaway you've been dreaming of. Be sure to add on a few activities!
How do I get a cheap travel package to Mission Bay?
Bundle your flights and hotels, throw in extras such as activities or a rental car, and save with a Mission Bay vacation package. You won't just pick up big discounts on your adventure — you'll have a world of choice too. When you book with Expedia, you'll have your pick of over 550 airlines and 1,000,000 hotels all over the world. Your next epic adventure begins right here, right now!
Where should I stay in Mission Bay?
A trip to Mission Bay isn't complete without seeing Pier 39 and Alcatraz Island. Reserve a room close by and easily access these popular tourist attractions.
How far in advance should I book my Mission Bay vacation?
Smart travelers often book as early as possible. You can usually compare international fares on Expedia up to 12 months before your flight. If you've left booking to the last minute, fear not. Budget prices sometimes appear just weeks before departure dates.
What does an Expedia Mission Bay travel package include?
Choose from a combination of hotels, rental cars and flights. Once you've made your booking, you can also add on activities and tours. Want to pick your airfare class? That's possible too. The choice is all yours when it comes to putting together your perfect Mission Bay trip.
What should I know before booking a Mission Bay travel package?
You'll pick up great savings when you bundle your flights, hotels and rental cars into a package. Not only that, booking everything in one place makes trip planning much easier. So why waste your time or money? Whether you're organizing an upscale romantic escape or a budget solo adventure, explore our package deals today.
Can I choose my airline with a Mission Bay Expedia vacation package?
You can, and with more than 550 airlines to choose from worldwide, you're not short on choice. Scroll through the available options and find out which airline best suits your needs and budget.
If I'm not able to travel, can I cancel my Mission Bay vacation package?
Plans can change unexpectedly, so yes, you can. You may be able to cancel and rebook your Mission Bay vacation package for free within 24 hours of booking. For bookings made more than 24 hours ago, you can still make the necessary changes, but your airline, hotel or car rental company may impose a fee. Want more information? Take a look at our Customer Service Portal. We'll help make sure your getaway goes off without a hitch.
* Savings based on package bookings compared to the price of the same components booked separately. Savings not available on all packages.