The Best Hotels Closest to San Diego Natural History Museum in San Diego for 2026

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Our top choices for San Diego Natural History Museum hotels

A hotel room with a herringbone-patterned floor, a bed, a chair, and curtains with room numbers.

1. Stay Classy Hostel

East Village, 2.3 km from San Diego Natural History Museum

Dylan

￥11,609 total

includes taxes & fees

Nov 12 - Nov 13

A narrow, enclosed walkway with wooden railings and a metal grid barrier, leading to a building entrance.

2. City24 Hotel Little Italy Mission Hills

2.3 km from San Diego Natural History Museum

Donavin

￥26,531 total

includes taxes & fees

Nov 2 - Nov 3

A rooftop pool with lounge chairs and a city skyline in the background.

3. Kasa Little Italy San Diego

2.3 km from San Diego Natural History Museum

Nirmeen

￥50,098 total

includes taxes & fees

Nov 17 - Nov 18

A spacious lounge area with a sofa, a coffee table, and a bar with stools.

4. Marriott Vacation Club®, San Diego

1.8 km from San Diego Natural History Museum

Veronica Dangerfield

￥26,295 total

includes taxes & fees

Nov 17 - Nov 18

A bar area with a glass ceiling, a central bar counter, and multiple stools.

5. Lafayette Hotel & Club

2.6 km from San Diego Natural History Museum

Heather

￥49,421 total

includes taxes & fees

Nov 3 - Nov 4

A luxurious room with a grand piano, plush blue sofas, ornate chandeliers, and elegant decor.

6. Westgate Hotel

2.3 km from San Diego Natural History Museum

Arlet

￥31,316 total

includes taxes & fees

Nov 8 - Nov 9

A modern bar area with a curved counter, multiple bar stools, and a large window offering a view of the cityscape.

7. Omni San Diego Hotel at the Ballpark

Gaslamp Quarter, 3 km from San Diego Natural History Museum

gregory

￥36,784 total

includes taxes & fees

Nov 22 - Nov 23

A spacious dining area with high ceilings, large chandeliers, and a modern interior design.

8. Pendry San Diego

Gaslamp Quarter, 2.8 km from San Diego Natural History Museum

Vasilios

￥62,505 total

includes taxes & fees

Nov 22 - Nov 23

A modern bedroom with a brick wall, a bed, a desk, and a seating area.

9. Keating Hotel By At Mine Hospitality

East Village, 2.3 km from San Diego Natural History Museum

Audrey

￥21,141 total

includes taxes & fees

Nov 4 - Nov 5

A restaurant with outdoor seating, brick walls, and decorative lighting.

10. The Horton Grand, Downtown/Gaslamp Quarter

Marina District, 2.8 km from San Diego Natural History Museum

Kelane

￥27,392 total

includes taxes & fees

Nov 22 - Nov 23

A rooftop lounge with a view of the city and ocean, featuring a sofa, chairs, and round tables.

11. Springhill Suites San Diego Downtown/Bayfront

2.8 km from San Diego Natural History Museum

Edgar

￥30,934 total

includes taxes & fees

Nov 24 - Nov 25

A rooftop terrace with outdoor seating, a view of the city, and a large window overlooking the harbor.

12. Residence Inn by Marriott San Diego Downtown/Bayfront

2.8 km from San Diego Natural History Museum

Chen

￥34,526 total

includes taxes & fees

Nov 22 - Nov 23

A hotel entrance with a stone archway, multiple windows, and potted plants.

13. Granger Hotel Gaslamp Quarter, A Member Of Design Hotels

Gaslamp Quarter, 2.2 km from San Diego Natural History Museum

Alisha

￥36,339 total

includes taxes & fees

Nov 15 - Nov 16

A multi-level interior with a staircase, wooden doors, and a balcony with plants.

14. Gaslamp Hostel

Gaslamp Quarter, 2.4 km from San Diego Natural History Museum

stacy

￥17,429 total

includes taxes & fees

Nov 1 - Nov 2

A narrow hotel room with a kitchenette, a dining area, and a bed.

15. The Artifact Inn

East Village, 2.3 km from San Diego Natural History Museum

Chris

￥33,388 total

includes taxes & fees

Oct 29 - Oct 30

A modern interior with a round table, two chairs, a hanging lamp, and a view of urban buildings through large windows.

16. The Margot Hotel San Diego Gaslamp Quarter, Outset by Hilton

East Village, 2.5 km from San Diego Natural History Museum

Nathan

￥33,629 total

includes taxes & fees

Nov 17 - Nov 18

An aerial view of a resort with multiple swimming pools, lounge areas, and palm trees.

17. Marriott Marquis San Diego Marina

Marina District, 3.1 km from San Diego Natural History Museum

Thomas Roy

￥52,359 total

includes taxes & fees

Oct 29 - Oct 30

An outdoor dining area with a long table and chairs, a street view, and a building with a 'P' parking sign.

18. Residence Inn by Marriott San Diego Downtown/Gaslamp Quarter

Gaslamp Quarter, 2.8 km from San Diego Natural History Museum

Alexis

￥26,230 total

includes taxes & fees

Nov 22 - Nov 23

A cityscape at dusk with high-rise buildings and a bridge in the distance.

19. Courtyard by Marriott San Diego Downtown Little Italy

Little Italy, 2 km from San Diego Natural History Museum

Nicole

￥27,784 total

includes taxes & fees

Nov 22 - Nov 23

A grand lobby with marble floors, a chandelier, and ornate doors.

20. Gaslamp Plaza Suites

Gaslamp Quarter, 2.2 km from San Diego Natural History Museum

George

￥24,262 total

includes taxes & fees

Oct 29 - Oct 30

View all properties

Compare popular hotels close to San Diego Natural History Museum

Property	Star rating	Guest rating
Stay Classy Hostel	2.0 star property	9.6 Exceptional 983 reviews	View
City24 Hotel Little Italy Mission Hills	4.5 star property	9.6 Exceptional 236 reviews	View
Kasa Little Italy San Diego	4.5 star property	9.6 Exceptional 556 reviews	View
Marriott Vacation Club®, San Diego	3.5 star property	9.4 Exceptional 1,256 reviews	View
Lafayette Hotel & Club	4.0 star property	9.4 Exceptional 2,115 reviews	View

Top San Diego Natural History Museum Hotel Reviews

Hard Rock Hotel San Diego

8/10 Good

"The staff was very friendly and helpful."

Uptown Inn by Vantaggio - Limited Service Apart-Hotel

8/10 Good

"Staff was easy to work with. Location was perfect and the biggest reason I booked. Building is old, walls are thin, climate control was a portable a/c unit affixed to the wall that turned on and off throughout the night. Room was updated but needs a deep cleaning. Wall vent is fuzzy and bathroom floor boards scuzzy. But hey, I slept good enough, felt safe, and walked to everything. Loved the view."

Keating Hotel By At Mine Hospitality

8/10 Good

"This stay was interesting to say the least. The room was a mix between an old school/hospital/jail room. The door to the room didn’t have a dead bolt or security bolt, only a latch. And also it was a push door with a lock, so the handle was useless. It’s in the middle of a very noisy block, the room basically shakes until 2am, but they provide earplugs. The shower reminded me of a locker room shower, as well as the sinks. Besides what I mentioned just being unexpected, the bed was comfy, the staff was very nice."

Other attractions near San Diego Natural History Museum

Fleet Science Center

Discover science through exhibits that will delight the entire family. Watch an IMAX film at San Diego’s museum and planetarium.

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Frequently asked questions

What's the area like around San Diego Natural History Museum?

San Diego Natural History Museum is located in an area of San Diego known for its beautiful ocean views, array of dining options, and popular zoo. If you're looking for a convenient place to stay, check out the 102 hotels and other accommodations you'll find within a mile.

What's the best place to stay close to San Diego Natural History Museum?

The Neon Elm Hotel is one of the top choices for your stay based on our traveler data, and this hotel offers free WiFi and in-room refrigerators. It's located just a short 1 mi (1.5 km) from San Diego Natural History Museum. Other good choices within a few miles include Wyndham San Diego Bayside and Best Western Seven Seas.

How many hotels can I expect to find near San Diego Natural History Museum?

Expedia has 102 hotels and other accommodations within a mile from San Diego Natural History Museum.

If I need to cancel the hotel reservation for my stay near San Diego Natural History Museum, will I receive a refund?

Yes! The majority of room reservations are refundable provided that you cancel prior to the accommodation's cancellation deadline, which is often 24 or 48 hours before the scheduled arrival. If you have a reservation that's non-refundable, you might still have the option to cancel and be given a refund within a 24-hour period of your booking. Put your dates in and click on "Search", then use the "fully refundable" filter to review the best deals near San Diego Natural History Museum.

Where can I learn more about changing or cancelling my trip in the area near San Diego Natural History Museum?

To find more details about picking new dates or cancelling your stay near San Diego Natural History Museum, go to https://www.expedia.com/service/.

What can I see and do near San Diego Natural History Museum?

San Diego Air and Space Museum, Maritime Museum of San Diego, and USS Midway Museum feature a variety of fascinating exhibits to see while you're in town. Explore landmarks like Hotel del Coronado, Mission Basilica San Diego de Alcala, and Casa de Balboa. You can check out the local talent at Old Globe Theater, San Diego Civic Theatre, and The Rady Shell at Jacobs Park.

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Our top choices for San Diego Natural History Museum hotels

1. Stay Classy Hostel

2. City24 Hotel Little Italy Mission Hills

3. Kasa Little Italy San Diego

4. Marriott Vacation Club®, San Diego

5. Lafayette Hotel & Club

6. Westgate Hotel

7. Omni San Diego Hotel at the Ballpark

8. Pendry San Diego

9. Keating Hotel By At Mine Hospitality

10. The Horton Grand, Downtown/Gaslamp Quarter

11. Springhill Suites San Diego Downtown/Bayfront

12. Residence Inn by Marriott San Diego Downtown/Bayfront

13. Granger Hotel Gaslamp Quarter, A Member Of Design Hotels

14. Gaslamp Hostel

15. The Artifact Inn

16. The Margot Hotel San Diego Gaslamp Quarter, Outset by Hilton

17. Marriott Marquis San Diego Marina

18. Residence Inn by Marriott San Diego Downtown/Gaslamp Quarter

19. Courtyard by Marriott San Diego Downtown Little Italy

20. Gaslamp Plaza Suites

Compare popular hotels close to San Diego Natural History Museum

Top San Diego Natural History Museum Hotel Reviews

Hard Rock Hotel San Diego

Other attractions near San Diego Natural History Museum

Fleet Science Center

Frequently asked questions

Explore a world of travel with Expedia