Find hotels near Mission Bay, San Diego from ￥12,061

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Check prices for these dates

This weekend
Jun 12 - Jun 14
Next weekend
Jun 19 - Jun 21

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Our top choices for Mission Bay hotels

Beach nearby, 5 beach bars

ITH Mission Beach Backpacker Hostel

ITH Mission Beach Backpacker Hostel
2.0 star property
Central Mission Beach, 2.4 km from Mission Bay
9.4 out of 10, Exceptional, (217 reviews)
"Staff was great, all areas of the property were clean and I felt safe"
United States
Jessi
The price is ￥21,405
￥24,134 total
includes taxes & fees
Jun 14 - Jun 15
ITH Mission Beach Backpacker Hostel
Exterior

Boardwalk Hotel: Bikes, Boards & Beach Gear Included

Boardwalk Hotel: Bikes, Boards & Beach Gear Included
3.0 star property
Mission Beach, 2.4 km from Mission Bay
9.4 out of 10, Exceptional, (386 reviews)
"Location was great"
United States
Amanda
The price is ￥51,998
￥58,627 total
includes taxes & fees
Jun 22 - Jun 23
Boardwalk Hotel: Bikes, Boards & Beach Gear Included
2 outdoor pools, a heated pool, sun loungers

The Dana on Mission Bay

The Dana on Mission Bay
3.5 star property
Mission Bay, 1.6 km from Mission Bay
9.0 out of 10, Wonderful, (4,399 reviews)
"Beautiful property, very helpful staff, great location"
United States
Jamie
The price is ￥35,130
￥44,991 total
includes taxes & fees
Jun 14 - Jun 15
The Dana on Mission Bay
5 outdoor pools, a heated pool, pool umbrellas, sun loungers

Paradise Point Resort & Spa

Paradise Point Resort & Spa
4.0 star property
Mission Bay, 1.3 km from Mission Bay
8.8 out of 10, Excellent, (2,656 reviews)
"This was a beautiful place to stay. Right by the water, staff was very helpful, restaurant's were good"
United States
Myesha
The price is ￥40,972
￥55,591 total
includes taxes & fees
Jun 14 - Jun 15
Paradise Point Resort & Spa
Outdoor pool, a heated pool

The Wayfarer San Diego

The Wayfarer San Diego
4.0 star property
Mission Beach, 3 km from Mission Bay
9.4 out of 10, Exceptional, (1,791 reviews)
"We love the location and the pool and hot tub were great. Having direct beach access was the best part of our trip. Will visit again!"
United States
Lily
The price is ￥46,070
￥52,955 total
includes taxes & fees
Jun 14 - Jun 15
The Wayfarer San Diego
Outdoor pool, open 7:00 AM to 10:00 PM, cabanas (surcharge)

San Diego Mission Bay Resort

San Diego Mission Bay Resort
4.0 star property
Mission Bay, 1.5 km from Mission Bay
8.6 out of 10, Excellent, (1,477 reviews)
"Great resort!"
United States
Jean-Michelle
The price is ￥43,188
￥58,132 total
includes taxes & fees
Jun 14 - Jun 15
San Diego Mission Bay Resort
In-room safe, desk, laptop workspace, blackout drapes

Holiday Inn Express San Diego - SeaWorld Area by IHG

Holiday Inn Express San Diego - SeaWorld Area by IHG
2.5 star property
2.5 km from Mission Bay
9.0 out of 10, Wonderful, (1,006 reviews)
"Clean room, great breakfast and amazing staff"
United States
Angeline
The price is ￥30,317
￥34,848 total
includes taxes & fees
Jun 14 - Jun 15
Holiday Inn Express San Diego - SeaWorld Area by IHG
3 outdoor pools, cabanas (surcharge), pool umbrellas

Hyatt Regency Mission Bay Spa and Marina

Hyatt Regency Mission Bay Spa and Marina
4.0 star property
Mission Bay, 1.9 km from Mission Bay
8.4 out of 10, Very Good, (1,633 reviews)
"Amazing place!"
United States
Yesenia
The price is ￥30,317
￥43,336 total
includes taxes & fees
Jun 14 - Jun 15
Hyatt Regency Mission Bay Spa and Marina
Free continental breakfast

Fairfield Inn & Suites by Marriott San Diego Pacific Beach

Fairfield Inn & Suites by Marriott San Diego Pacific Beach
3.0 star property
Pacific Beach, 2.9 km from Mission Bay
8.8 out of 10, Excellent, (903 reviews)
"Great service from start to finish and very clean hotel "
United States
Jesus
The price is ￥27,430
￥31,529 total
includes taxes & fees
Jun 15 - Jun 16
Fairfield Inn & Suites by Marriott San Diego Pacific Beach
Property entrance

Catamaran Resort and Spa

Catamaran Resort and Spa
4.0 star property
Mission Beach, 2.9 km from Mission Bay
8.6 out of 10, Excellent, (1,273 reviews)
"Great location, super nice staff and perfect room"
United States
Alexandre
The price is ￥42,125
￥56,952 total
includes taxes & fees
Jun 14 - Jun 15
Catamaran Resort and Spa
Lobby

Best Western San Diego Pacific Beach/Mission Bay

Best Western San Diego Pacific Beach/Mission Bay
2.5 star property
2.5 km from Mission Bay
8.2 out of 10, Very Good, (416 reviews)
"Location was great!"
United States
Richard
The price is ￥16,798
￥19,309 total
includes taxes & fees
Jun 17 - Jun 18
Best Western San Diego Pacific Beach/Mission Bay
Lobby

Comfort Inn Sea World Area

Comfort Inn Sea World Area
3.5 star property
3.2 km from Mission Bay
8.6 out of 10, Excellent, (3,751 reviews)
"Nice staff and good breakfast"
United States
Fernando
The price is ￥19,811
￥22,772 total
includes taxes & fees
Jun 15 - Jun 16
Comfort Inn Sea World Area
Lobby sitting area

GreenTree Inn San Diego Mission Bay

GreenTree Inn San Diego Mission Bay
2.5 star property
Pacific Beach, 3 km from Mission Bay
8.0 out of 10, Very Good, (2,160 reviews)
"THE BED WAS SO SOFT ROOM WAS SO CLEAN BREAKFAST WAS GREAT AND THE PRICE WAS KILLER FOR THE LOCATION really a great place to stay"
United States
Tyson
The price is ￥20,660
￥23,747 total
includes taxes & fees
Jun 15 - Jun 16
GreenTree Inn San Diego Mission Bay
Fishing

Surfer Beach Hotel

Surfer Beach Hotel
3.0 star property
Pacific Beach, 3 km from Mission Bay
8.2 out of 10, Very Good, (1,299 reviews)
"Great place to stay."
United States
Aleta
The price is ￥42,990
￥48,555 total
includes taxes & fees
Jun 14 - Jun 15
Surfer Beach Hotel
Desk, laptop workspace, blackout drapes, iron/ironing board

SureStay Hotel by Best Western San Diego Pacific Beach

SureStay Hotel by Best Western San Diego Pacific Beach
2.5 star property
Pacific Beach, 3 km from Mission Bay
8.0 out of 10, Very Good, (1,577 reviews)
"Nice room clean good breakfast"
United States
Michael
The price is ￥17,661
￥19,948 total
includes taxes & fees
Jun 15 - Jun 16
SureStay Hotel by Best Western San Diego Pacific Beach
Sundeck

ITH Beach Bungalow Surf Hostel

ITH Beach Bungalow Surf Hostel
2.0 star property
Pacific Beach, 3.2 km from Mission Bay
8.0 out of 10, Very Good, (263 reviews)
"Amazing staff! Great vibes! I will definitely be returning"
United States
mike
The price is ￥10,698
￥12,061 total
includes taxes & fees
Jun 14 - Jun 15
ITH Beach Bungalow Surf Hostel
Outdoor pool

Heritage Inn San Diego

Heritage Inn San Diego
2.0 star property
2.5 km from Mission Bay
7.4 out of 10, Good, (1,517 reviews)
"Great stay"
United States
Alyssa
The price is ￥11,620
￥13,356 total
includes taxes & fees
Jun 14 - Jun 15
Heritage Inn San Diego
Lobby

Wyndham Garden San Diego Near SeaWorld

Wyndham Garden San Diego Near SeaWorld
3.0 star property
2.8 km from Mission Bay
7.4 out of 10, Good, (4,271 reviews)
"Clean room, staff was very helpful, parking was easy and accessible!"
United States
Hector
The price is ￥19,089
￥21,942 total
includes taxes & fees
Jun 15 - Jun 16
Wyndham Garden San Diego Near SeaWorld
Standard Double or Twin Room

Mission Bay Motel

Mission Bay Motel
Pacific Beach, 3 km from Mission Bay
6.6 out of 10, (55 reviews)
"The location was great can't beat it for the price."
United States
Juan C
The price is ￥12,473
￥14,063 total
includes taxes & fees
Jun 28 - Jun 29
Mission Bay Motel
Exterior

E-Z 8 Motel Old Town

E-Z 8 Motel Old Town
2.5 star property
Old Town San Diego, 3.1 km from Mission Bay
6.6 out of 10, (2,112 reviews)
"Nice overall"
United States
Martin
The price is ￥11,896
￥13,672 total
includes taxes & fees
Jun 14 - Jun 15
E-Z 8 Motel Old Town
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
View all properties

Compare popular hotels close to Mission Bay

Property
Star rating
Guest rating
Breakfast included
Pool
Spa
Pet friendly
WiFi included
Beach nearby, 5 beach bars
ITH Mission Beach Backpacker Hostel
2.0 star property
9.4
Exceptional
217 reviews
View
Exterior
Boardwalk Hotel: Bikes, Boards & Beach Gear Included
3.0 star property
9.4
Exceptional
386 reviews
View
2 outdoor pools, a heated pool, sun loungers
The Dana on Mission Bay
3.5 star property
9.0
Wonderful
4,399 reviews
View
5 outdoor pools, a heated pool, pool umbrellas, sun loungers
Paradise Point Resort & Spa
4.0 star property
8.8
Excellent
2,656 reviews
View
Outdoor pool, a heated pool
The Wayfarer San Diego
4.0 star property
9.4
Exceptional
1,791 reviews
View

Top Mission Bay Hotel Reviews

Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

10/10 Excellent
"The hotel was modern, clean, and well-maintained. The staff was welcoming and friendly during check-in, which made for a positive first impression. The room was clean and comfortable throughout our stay. One area that could be improved is customer service consistency. On one occasion, while purchasing snacks, the front desk staff did not acknowledge us and seemed unfriendly. Parking was somewhat limited, and additional parking spaces would be beneficial. The surrounding neighborhood was a bit rough, but the hotel itself felt clean and secure. Overall, we had a pleasant stay and appreciated the cleanliness and updated appearance of the property."
Joshua 2-night trip
Posted less than an hour ago
Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

Hotels near other Mission Bay attractions

Ski Beach

Why not spend a lazy afternoon at Ski Beach during your trip to San Diego?
See properties

Frequently asked questions

What's the area like around Mission Bay?
Mission Bay is located in a family-friendly area of San Diego known for its array of dining options and popular zoo. If you're looking for a convenient place to stay, check out the 46 hotels and other accommodations you'll find within a mile.
Where is the best place to stay near Mission Bay?
San Diego Mission Bay Resort is one of the top choices for your stay based on our traveler data, and this resort offers a full-service spa and 2 restaurants. It's located just a short 0.9 mi (1.5 km) from Mission Bay. Another good option is Paradise Point Resort & Spa, located just 0.8 mi (1.3 km) away.
How many hotels can I expect to find close to Mission Bay?
Expedia has 46 hotels and other accommodations within a mile from Mission Bay.
If I need to cancel the hotel reservation for my stay near Mission Bay, will I receive a refund?
Yes! You'll find that most hotel bookings are fully refundable provided that you cancel before the hotel's cancellation deadline, which in most cases is within 24 or 48 hours of your arrival date. If your reservation is non-refundable, you may still be able to cancel and be given a refund within 24 hours of booking. Enter your dates, click on "Search", then filter by "fully refundable" to review the top deals on offer near Mission Bay.
Where can I learn more about changing or cancelling my trip in the area near Mission Bay?
For more details about picking new dates or cancelling your stay near Mission Bay, head over to our customer service page.
What can I see and do near Mission Bay?
Study the collections at Maritime Museum of San Diego, Whaley House Museum, or Junipero Serra Museum. Mason Street School, Casa de Machado y Stewart, and McCoy Museum House are well-known local landmarks worth a visit. You can catch a show at Humphreys Concerts by the Bay, San Diego Black Ensemble Theater, and Cygnet Theater Company.

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