Find Boutique Hotels in Shinjuku
Change your mindBook hotels with free cancellation
Be pickySearch almost a million properties worldwide
Check availability on Shinjuku Boutique Hotels
Our top choices for Shinjuku boutique hotels
9.4 out of 10, Exceptional, (1008)
"Service was exceptional and the hotel itself is amazing! Definitely recommend and will stay again happily! "
Param
9.8 out of 10, Exceptional, (1087)
"Hotel was fantastic."
Travis
9.0 out of 10, Wonderful, (1005)
"Excellent hotel"
Rodney
9.8 out of 10, Exceptional, (1007)
"Great location and good breakfast!"
Samantha C
9.8 out of 10, Exceptional, (1009)
"Lovely room with amazing amenities and service. Would stay again. "
Julia
9.4 out of 10, Exceptional, (1001)
"Clean room, comfortable bed and nice staff."
Richard
9.8 out of 10, Exceptional, (1007)
"Beautiful and friendly with great breakfast choices "
mirtha
9.6 out of 10, Exceptional, (600)
"Todo excelente"
Ana
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
Price trends for hotels in Shinjuku
Less expensive | More expensive | This month | Next month |
|---|---|---|---|
January | December | ￥17,023 | ￥19,822 |
Month | Price |
|---|---|
January | ￥17,023 |
February | ￥19,822 |
March | ￥24,556 |
April | ￥25,821 |
May | ￥22,705 |
June | ￥19,158 |
July | ￥20,498 |
August | ￥19,363 |
September | ￥21,074 |
October | ￥23,680 |
November | ￥22,801 |
December | ￥26,693 |
Price trend information excludes taxes and fees and is based on base rates for a nightly stay for 2 adults found in the last 7 days on our site and averaged for commonly viewed hotels in Shinjuku.
Top Shinjuku Hotel Reviews
Shinjuku Granbell Hotel
10/10 Excellent
Frequently asked questions
Explore a world of travel with Expedia
- Resorts in Tokyo Prefecture
- Aparthotels in Higashi-shinjuku Station
- Hotels with Early Check-in in Tokyo Prefecture
- Kabukicho Hotels
- Hotels near Tokyo Station
- Holiday Park Resorts in Tokyo Prefecture
- Beach Hotels in Shinjuku
- Ryokans in Shinjuku-sanchome Station
- Aparthotels in Seibu-Shinjuku Station
- Tokyo Hotels
- Adults Only Resorts & in Tokyo Prefecture
- Beach Hotels in Tokyo Prefecture
- Gay friendly Hotels in Shinjuku Golden Gai
- 3 Star Hotels in Shinjuku
- Ryokans in Higashi-shinjuku Station
- Hotels near Hanazono Shrine
- Chalets in Tokyo Prefecture
- Hotels with WiFi in Kabukicho
- Hotels near Shinjuku Station
- Motels in Tokyo Prefecture
- Shinjuku Golden Gai Hotels
- Aparthotels in Tokyo Station
- Resorts in Shinjuku-nishiguchi Station
- Historic Hotels in Tokyo Prefecture
- Capsule Hotels in Nishi-shinjuku Station
- Hotels with smoking rooms in Tokyo Prefecture
- Lodges in Shinjuku-sanchome Station
- Okubo Hotels
- Romantic Hotels in Shinjuku
- Hostels in Tokyo Prefecture
- Residences in Shinjuku Station
- Treehouses in Shin-Okubo Station
- Safari Tentalow in Tokyo Prefecture
- Hotels near Shinjuku Gyoen National Garden
- Capsule Hotels in Shinjuku-nishiguchi Station
- Treehouses in Tokyo Prefecture
- 5 Star Hotels in Shinjuku
- Ryokans in Shinjuku Station
- Lodges in Higashi-shinjuku Station
- Hotels with Free Parking in Kabukicho
- Riads in Tokyo Prefecture
- Family Hotels in Shinjuku
- Capsule Hotels in Tokyo Prefecture
- Ryokans in Tokyo Prefecture
- Ranches in Tokyo Prefecture
- Hotels near Omoide Yokocho
- Palaces in Tokyo Prefecture
- Cheap Hotels in Shinjuku
- Guest Houses in Shinjuku-sanchome Station
- Ranches in Seibu-Shinjuku Station
- Casino Hotels in Shinjuku Golden Gai
- Luxury Hotels in Shinjuku Golden Gai
- Villas in Higashi-shinjuku Station
- B&B in Seibu-Shinjuku Station
- Scuba Diving Hotels in Tokyo Prefecture
- Romantic Hotels in Tokyo Prefecture
- Hotels near Okubo Park
- Ski Hotels in Shinjuku
- Rv Parks in Shin-Okubo Station
- Pet-Friendly Hotels in Tokyo Prefecture
- Cheap Hotels in Tokyo Prefecture
- Hostels in Shinjuku Station
- Business Hotels in Tokyo Prefecture
- Condo Rentals in Shinjuku Station
- Aparthotels in Tokyo Prefecture
- Hotels with Bars in Shinjuku Golden Gai
- Shinjuku Hotels
- Hotels with Bars in Tokyo Prefecture
- Pet-Friendly Hotels in Shinjuku
- Residences in Shin-Okubo Station
- Tokyo Prefecture Hotels
- Castles in Tokyo Prefecture
- Capsule Hotels in Shinjuku Station
- Hotels with Hot Tubs in Tokyo Prefecture
- Hotels near Hotel New Otani Tokyo
- Family Hotels in Tokyo Prefecture
- Ryokans in Shinjuku-gyoemmae Station
- Hotels near Shinjuku-sanchome Station
- Hotels with smoking rooms in Shinjuku
- Town Houses in Higashi-shinjuku Station
- Ranches in Shinjuku-sanchome Station
- Cheap Hotels in Tokyo
- Resorts in Shinjuku-sanchome Station
- Houseboats in Tokyo Prefecture
- Luxury Hotels in Shinjuku
- Town Houses in Tokyo Prefecture
- Villas in Tokyo Prefecture
- Hostels in Shinjuku-nishiguchi Station
- Cheap Hotels in Shinjuku Golden Gai
- Hotels near Seibu-Shinjuku Station
- Ranches in Shinjuku-nishiguchi Station
- Luxury Hotels in Kabukicho
- Shibuya Hotels