A coastal cityscape with a beach, ocean waves, and a clear sky.

Find Boutique Hotels in Encinitas, CA

  • Change your mind

    Book hotels with free cancellation

  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
    Sign in

  • Be picky

    Search almost a million properties worldwide

Check availability on Encinitas Boutique Hotels

Our top choices for Encinitas boutique hotels

A modern two-story building with a wooden facade, a garage, and a well-maintained garden with various plants and flowers.

1. Twelve Senses Retreat

Twelve Senses Retreat
3.0 star property
Encinitas
9.8 out of 10, Exceptional, (45 reviews)
"Amazing hand cooked breakfast by the owners! "
United States
Jacklyn
The price is ￥59,325
￥65,578 total
includes taxes & fees
Nov 13 - Nov 14
Twelve Senses Retreat
A hotel room with two beds, a sofa, a chair, a TV, and a window with a view of a park.

2. Brisa Pacific Hotel Encinitas

Brisa Pacific Hotel Encinitas
2.0 star property
Downtown Encinitas
8.8 out of 10, Excellent, (1,000 reviews)
"Great location , comfortable bed , spacious room"
Australia
Alison
The price is ￥17,255
￥18,981 total
includes taxes & fees
Nov 15 - Nov 16
Brisa Pacific Hotel Encinitas
A hotel with a swimming pool, outdoor seating, and a covered area.

3. The Encinitan Hotel & Suites

The Encinitan Hotel & Suites
3.0 star property
Downtown Encinitas
8.2 out of 10, Very good, (1,756 reviews)
"Very decent hotel, we had a wonderful stay. would love to visit again."
United States
Jason
The price is ￥18,410
￥22,667 total
includes taxes & fees
Dec 13 - Dec 14
The Encinitan Hotel & Suites
A modern living room with a sofa, a dining area, a kitchen, and a TV mounted on a wall with a mural.

4. Days Inn by Wyndham Encinitas Moonlight Beach

Days Inn by Wyndham Encinitas Moonlight Beach
2.0 star property
Downtown Encinitas
7.0 out of 10, Good, (1,388 reviews)
"Very clean, and the staff very kind."
United States
Jeanette
The price is ￥11,863
￥13,108 total
includes taxes & fees
Nov 17 - Nov 18
Days Inn by Wyndham Encinitas Moonlight Beach
A hotel room with two beds, a desk, a chair, a nightstand, and a window with a view of greenery.

5. Comfort Inn Encinitas Near Legoland

Comfort Inn Encinitas Near Legoland
2.5 star property
Leucadia
7.0 out of 10, Good, (1,012 reviews)
"This was an excellent stay! We were very comfortable and they have great free breakfast!"
United States
Hanna
The price is ￥15,673
￥17,271 total
includes taxes & fees
Nov 22 - Nov 23
Comfort Inn Encinitas Near Legoland
A water park with multiple slides and a pool.

6. Park Hyatt Aviara Resort, Golf Club & Spa

Park Hyatt Aviara Resort, Golf Club & Spa
5.0 star property
Aviara
9.4 out of 10, Exceptional, (1,001 reviews)
"Great staff and nice rooms. Everything was great."
United States
Noyem
The price is ￥68,637
￥89,790 total
includes taxes & fees
Nov 15 - Nov 16
Park Hyatt Aviara Resort, Golf Club & Spa
A dining table set with wine glasses, a bowl of greens, and a water glass.

7. Four Seasons Residence Club Aviara, North San Diego

Four Seasons Residence Club Aviara, North San Diego
5.0 star property
Aviara
9.4 out of 10, Exceptional, (403 reviews)
"Clean property in quiet location. Spa is closed on Sunday. Service is top notch and restaurant service was excellent"
United States
Ramy
The price is ￥103,168
￥124,297 total
includes taxes & fees
Dec 11 - Dec 12
Four Seasons Residence Club Aviara, North San Diego
An outdoor seating area with stone pillars, a fire feature, and a view of the sunset.

8. Cape Rey Carlsbad Beach, a Hilton Resort & Spa

Cape Rey Carlsbad Beach, a Hilton Resort & Spa
4.5 star property
South Beach
8.8 out of 10, Excellent, (1,000 reviews)
"Great hotel"
United States
Heather
The price is ￥21,978
￥31,300 total
includes taxes & fees
Nov 22 - Nov 23
Cape Rey Carlsbad Beach, a Hilton Resort & Spa
A wooden deck with a sofa and chairs, a table, and a view of the ocean.

9. Alila Marea Beach Resort Encinitas, a Hyatt Luxury Resort

Alila Marea Beach Resort Encinitas, a Hyatt Luxury Resort
5.0 star property
Encinitas
8.8 out of 10, Excellent, (300 reviews)
"We had a fabulous stay at these gorgeous resort. The staff was attentive and helpful with any questions we had. We’d rate this one of the best places we’ve stayed and live Encinitas area."
United States
Thomas
The price is ￥65,297
￥81,232 total
includes taxes & fees
Nov 15 - Nov 16
Alila Marea Beach Resort Encinitas, a Hyatt Luxury Resort
A LEGO play area with a pirate ship theme, including a castle and a ship with a skull and crossbones flag.

10. LEGOLAND California Hotel

LEGOLAND California Hotel
3.0 star property
Carlsbad Ranch
8.8 out of 10, Excellent, (683 reviews)
"Wonderful place to stay with young kids."
United States
Brendon
The price is ￥22,771
￥33,647 total
includes taxes & fees
Dec 8 - Dec 9
LEGOLAND California Hotel
An outdoor seating area with a fire pit, chairs, and a pergola.

11. The Cassara Carlsbad, Tapestry Collection by Hilton

The Cassara Carlsbad, Tapestry Collection by Hilton
3.5 star property
Carlsbad Ranch
8.6 out of 10, Excellent, (1,001 reviews)
"Great hotel and excellent service from the staff!"
United States
Patricia
The price is ￥24,309
￥31,463 total
includes taxes & fees
Nov 19 - Nov 20
The Cassara Carlsbad, Tapestry Collection by Hilton
A spacious living room with a fireplace, a chandelier, and a large window with a view of the outdoors.

12. Omni La Costa Resort & Spa Carlsbad

Omni La Costa Resort & Spa Carlsbad
4.0 star property
La Costa
8.4 out of 10, Very good, (1,000 reviews)
"Pretty resort , king & helpful staff"
United States
Doron
The price is ￥39,033
￥54,131 total
includes taxes & fees
Nov 22 - Nov 23
Omni La Costa Resort & Spa Carlsbad
A modern kitchen with a large island, a refrigerated display case, and a textured backsplash.

13. Best Western Carlsbad by the Sea

Best Western Carlsbad by the Sea
2.5 star property
South Beach
8.0 out of 10, Very good, (1,556 reviews)
"Great place to stay, loved it"
United States
Jorge Adrian
The price is ￥16,055
￥18,014 total
includes taxes & fees
Dec 9 - Dec 10
Best Western Carlsbad by the Sea
A staircase with wooden railings leading to a beach, surrounded by palm trees and a clear sky.

14. Rodeway Inn Encinitas North

Rodeway Inn Encinitas North
2.0 star property
Leucadia
7.8 out of 10, Good, (1,000 reviews)
"Great stay would come again"
United States
Jessica
The price is ￥10,625
￥12,487 total
includes taxes & fees
Dec 1 - Dec 2
Rodeway Inn Encinitas North
A hotel room with a bed, bedside tables, a desk, and a chair.

15. Motel 6 Carlsbad East, CA - Near Legoland

Motel 6 Carlsbad East, CA - Near Legoland
2.0 star property
City Center
7.6 out of 10, Good, (1,976 reviews)
"Nice location rooms were nice"
United States
Shane
The price is ￥9,841
￥11,022 total
includes taxes & fees
Dec 13 - Dec 14
Motel 6 Carlsbad East, CA - Near Legoland
A building with a windmill, a parking lot, and a view of a flower field.

16. Carlsbad by the Sea Hotel, Carlsbad, Series By Marriott

Carlsbad by the Sea Hotel, Carlsbad, Series By Marriott
3.0 star property
City Center
7.8 out of 10, Good, (100 reviews)
"The property was very well kept & the staff was amazing. We were able to bring our senior dog with no troubles at all. It was a lovely stay for the family."
United States
Amanda
The price is ￥19,460
￥25,443 total
includes taxes & fees
Nov 22 - Nov 23
Carlsbad by the Sea Hotel, Carlsbad, Series By Marriott
A pool area with a view of palm trees and a sunset.

17. La Quinta Inn & Suites by Wyndham Carlsbad - Legoland Area

La Quinta Inn & Suites by Wyndham Carlsbad - Legoland Area
3.0 star property
South Beach
7.6 out of 10, Good, (1,779 reviews)
"Breakfast was delicious"
United States
Debra
The price is ￥16,730
￥18,770 total
includes taxes & fees
Nov 22 - Nov 23
La Quinta Inn & Suites by Wyndham Carlsbad - Legoland Area
An outdoor pool area with lounge chairs and a covered seating area.

18. Holiday Inn Express & Suites Carlsbad Beach by IHG

Holiday Inn Express & Suites Carlsbad Beach by IHG
2.5 star property
South Beach
7.6 out of 10, Good, (1,003 reviews)
"overall great place to stay"
United States
robert
The price is ￥14,920
￥16,740 total
includes taxes & fees
Dec 13 - Dec 14
Holiday Inn Express & Suites Carlsbad Beach by IHG
An aerial view of a hotel with multiple buildings, parking lots, and a surrounding urban area.

19. Motel 6 Carlsbad, CA Beach

Motel 6 Carlsbad, CA Beach
2.0 star property
South Beach
6.8 out of 10, (2,136 reviews)
"The room was clean and the staff was helpful."
United States
Sitlali
The price is ￥9,141
￥10,544 total
includes taxes & fees
Dec 13 - Dec 14
Motel 6 Carlsbad, CA Beach
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
View all properties

Top Encinitas Hotel Reviews

Days Inn by Wyndham Encinitas Moonlight Beach

Days Inn by Wyndham Encinitas Moonlight Beach

8/10 Good
"They’re in construction right now but open and it’s improving immensely. Great staff, will be back. So close to the ocean and within walking distance to many places."
Ericka 4-night trip
Posted 22 hours ago
Days Inn by Wyndham Encinitas Moonlight Beach

Frequently asked questions

What's there to see and do in Encinitas?
The beaches, ocean views, and sunsets are just some of the things to enjoy while you're in the area. Major sights and activities around Encinitas include LEGOLAND® California, Mission Bay, and San Diego Zoo Safari Park. You might also like to explore more of the area and take in additional sights like Moonlight State Beach, San Elijo State Beach, and Self Realization Fellowship Hermitage & Meditation Gardens while you're here.
What kind of weather should I plan for when I travel to Encinitas?
Understanding the weather in Encinitas is important when you plan your trip. The hottest months are usually September and August with an average temp of 70°F, while the coldest months are February and January with an average of 57°F. Average annual precipitation for Encinitas is 13 inches.
What's the best way to get to my boutique hotel in Encinitas?
You have a few options for transportation to and around Encinitas. The nearest major airport is Carlsbad, CA (CLD-McClellan-Palomar), which is located 6.2 mi (10 km) from the heart of the city, but San Diego, CA (MYF-Montgomery Field) may also be an option. If you'd like to explore around the area, consider renting a car to take in more sights.

Explore a world of travel with Expedia