Find hotels in San Juan Island, WA from ¥15,030

Start date: Check-in selected.
To Date
End date: Check-out
  • Change your mind

    Book hotels with free cancellation
  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
  • Be picky

    Search almost a million properties worldwide

Check prices for these dates

Filter by

Guest rating
Guest rating
Star rating

Our top choices for San Juan Island hotels

Roche Harbor Resort

Roche Harbor Resort
3.0 star property
Friday Harbor
9.2 out of 10, Wonderful, (415)
Immerse in luxury at this spa resort steps from Roche Harbor Marina. Enjoy 3 restaurants, a seasonal outdoor pool, tennis court, and full-service spa offering hot stone massages. The San Juan Islands Sculpture Park awaits exploration just minutes away.

"Nice clean and comfy rooms. Staff was really friendly and helpful. "
United States
David
Roche Harbor Resort

Snug Harbor Resort

Snug Harbor Resort
2.5 star property
Friday Harbor
9.8 out of 10, Exceptional, (433)
Escape to this San Juan Islands retreat featuring a marina, 24-hour fitness center, and welcoming coffee shop. Explore nearby English Camp or relax on the terrace surrounded by garden views. Free WiFi and parking enhance your convenient island stay.

"Perfect and romantic place!!!"
United States
Sorangel
The price is ¥32,112
¥35,435 total
includes taxes & fees
Dec 16 - Dec 17
Snug Harbor Resort

Tucker House Inn

Tucker House Inn
4.0 star property
Friday Harbor
9.4 out of 10, Exceptional, (280)
Escape to this Friday Harbor B&B with a full-service spa and relaxing hot tub. The restaurant serves delicious meals after exploring nearby Whale Museum on free bikes. Close to the seaplane base with convenient WiFi and parking.

"Room was great - check-in by email was easy."
Canada
Peter
The price is ¥24,531
¥27,142 total
includes taxes & fees
Dec 16 - Dec 17
Tucker House Inn

Friday Harbor Suites

Friday Harbor Suites
2.5 star property
Friday Harbor
8.4 out of 10, Very Good, (1001)
Serene retreat with easy access to downtown restaurants and shops. The café serves delicious food and coffee, while rooms include refrigerators and microwaves. A relaxing hot tub, garden, and attentive staff complete this quiet island escape.

"Great room, great staff, love the hotel. This will be our go to for visits here! "
United States
Nathaniel
The price is ¥28,575
¥31,618 total
includes taxes & fees
Dec 17 - Dec 18
Friday Harbor Suites

Earthbox Inn & Spa

Earthbox Inn & Spa
3.0 star property
Friday Harbor
8.8 out of 10, Excellent, (997)
"Earthbox is an awesome hotel. Location is perfect and so convenient for shopping and dining. Beautiful rooms and lovely pool. Staff are top notch!"
United States
Crystal
The price is ¥31,941
¥35,344 total
includes taxes & fees
Dec 31 - Jan 1, 2026
Earthbox Inn & Spa

Bird Rock Hotel

Bird Rock Hotel
2.0 star property
Friday Harbor
8.8 out of 10, Excellent, (362)
Experience ocean breezes at this charming hotel near Whale Museum and San Juan Islands Museum of Art. Hike, bike, or kayak nearby, then unwind in rooms with nice bathrooms. A garden and terrace provide peaceful spots to relax.

"Having stayed at Bird Rock and Earthbox I'd choose Earthbox for my next visit to Friday Harbor. Both properties are well decorated and maintained but, despite Bird Rock's convenience, for those who are walking from the ferry, Earthbox has the advantage of being a quiet location who's rooms ( or at least my room ) have sleeping areas that are not flooded with light ( during typical sleeping hours). The staff are very helpful and welcoming."
United States
Tara
The price is ¥28,669
¥31,721 total
includes taxes & fees
Dec 16 - Dec 17
Bird Rock Hotel

Friday Harbor House

Friday Harbor House
3.5 star property
Friday Harbor
9.6 out of 10, Exceptional, (242)
Perched in Friday Harbor, this inviting hotel places guests near Whale Museum and San Juan Islands Museum of Art. The restaurant serves delicious meals while the garden and terrace offer peaceful retreats after exploring local attractions.

"Beautiful location, nice room, and helpful staff. It was the perfect spot for a cozy wintertime island escape!"
United States
Julie
The price is ¥35,958
¥39,788 total
includes taxes & fees
Dec 17 - Dec 18
Friday Harbor House

The Marina Inn

The Marina Inn
2.5 star property
Anacortes
9.6 out of 10, Exceptional, (1001)
Discover maritime charm at this harbor-adjacent hotel in Anacortes, offering complimentary breakfast, WiFi, and parking. Guests love the convenient location near Cap Sante Boat Haven and John Storvik Playground, plus the fitness center for active travelers.

"Nice stay all around, staff, room and breakfast were all great."
United States
Marilyn
The price is ¥16,360
¥18,440 total
includes taxes & fees
Dec 16 - Dec 17
The Marina Inn

Anacortes Ship Harbor Inn

Anacortes Ship Harbor Inn
3.0 star property
Anacortes
9.0 out of 10, Wonderful, (1005)
Located near Deception Pass State Park, this welcoming hotel offers a fitness center and comfortable rooms with refrigerators and microwaves. Enjoy drinks at the bar or snacks from the deli, then relax on the terrace. Free WiFi, breakfast, and parking enhance the value.

"Cozy stay and good waffles."
United States
Jenifer
The price is ¥13,883
¥15,380 total
includes taxes & fees
Dec 16 - Dec 17
Anacortes Ship Harbor Inn

Outlook Inn

Outlook Inn
3.0 star property
Eastsound
9.2 out of 10, Wonderful, (504)
Discover tranquil island charm at this Eastsound hotel with a garden retreat. Dine on local fare at New Leaf Cafe, relax at the bar, and enjoy helpful staff praised by travelers. Near Darvill's Bookstore and Orcas Island Historical Museum.

"Gorgeous views, relaxing, dog-friendly - everything we were looking for."
United States
Katherine
The price is ¥32,469
¥38,168 total
includes taxes & fees
Dec 22 - Dec 23
Outlook Inn

Otters Pond Bed & Breakfast

Otters Pond Bed & Breakfast
4.0 star property
Eastsound
10.0 out of 10, Exceptional, (61)
Peaceful retreat with complimentary breakfast, WiFi, and parking. Relax in the hot tub after exploring Cascade Lake or hiking local trails. Just a short drive from Rosario Mansion Museum and seaplane base.

"Lovely, relaxing stay with excellent breakfast. "
United States
Juli
The price is ¥24,344
¥26,863 total
includes taxes & fees
Jan 15 - Jan 16, 2026
Otters Pond Bed & Breakfast

Anacortes Inn

Anacortes Inn
2.0 star property
Anacortes
8.8 out of 10, Excellent, (412)
Located just minutes from Deception Pass State Park, this motel offers free WiFi and parking for your Pacific Northwest adventure. Clean, comfortable rooms provide a relaxing retreat after exploring Cap Sante Boat Haven and nearby attractions.

"Great room and service!"
United States
Channdara
The price is ¥15,425
¥17,403 total
includes taxes & fees
Dec 16 - Dec 17
Anacortes Inn

Auld Holland Inn

Auld Holland Inn
2.5 star property
Oak Harbor
8.2 out of 10, Very Good, (1003)
"Lovely Inn! It’s my favorite place to stay when I am in Oak Harbor."
United States
Summer
The price is ¥13,540
¥15,030 total
includes taxes & fees
Dec 16 - Dec 17
Auld Holland Inn

West Beach Resort

West Beach Resort
3.5 star property
Eastsound
9.4 out of 10, Exceptional, (107)
Unwind at this Eastsound beach cabin with its private shoreline and convenient marina. Enjoy drinks at the beach bar, meals at the café, and soothing dips in the hot tub. Free WiFi and parking plus in-room refrigerators make for a carefree island getaway.

"The employee was very kind, she guided us very well and the room was clean and tidy."
United States
Rosalina
The price is ¥25,381
¥28,008 total
includes taxes & fees
Dec 16 - Dec 17
West Beach Resort

Anaco Bay Inn

Anaco Bay Inn
2.0 star property
Anacortes
8.0 out of 10, Very Good, (1000)
"Great stay very comfortable room and the front desk gal was great!"
United States
Jason
The price is ¥10,907
¥12,085 total
includes taxes & fees
Dec 16 - Dec 17
Anaco Bay Inn

Coachman Inn & Suites

Coachman Inn & Suites
2.5 star property
Oak Harbor
9.2 out of 10, Wonderful, (1002)
Unwind in this peaceful Oak Harbor retreat featuring 2 hot tubs, a seasonal outdoor pool, and fitness center. Explore nearby Whidbey Playhouse or relax in beautifully landscaped gardens. Enjoy free breakfast and WiFi with attentive staff ready to enhance your stay.

"Good place to stay."
Canada
Christine
The price is ¥18,838
¥20,909 total
includes taxes & fees
Dec 22 - Dec 23
Coachman Inn & Suites

Sunrise Inn Villas and Suites

Sunrise Inn Villas and Suites
2.5 star property
Anacortes
8.6 out of 10, Excellent, (679)
Located 15 minutes from Deception Pass State Park, this hotel offers a business center and complimentary parking. Close to Cap Sante Boat Haven and John Storvik Playground, the property earns praise for its attentive staff.

"Great rooms and very friendly staff. "
United States
Virginia
The price is ¥13,890
¥17,116 total
includes taxes & fees
Jan 15 - Jan 16, 2026
Sunrise Inn Villas and Suites

Salish Inn

Salish Inn
2.5 star property
Anacortes
8.4 out of 10, Very Good, (604)
Set in Anacortes, this welcoming hotel offers a complimentary continental breakfast and convenient access to Cap Sante Boat Haven. Guests appreciate the clean rooms, fitness center, and helpful staff. John Storvik Playground is located nearby for family fun.

"The beds were comfortable and sheets were soft. The room has all you need but very basic. Easy parking and location is good. "
Canada
Christina
The price is ¥16,681
¥21,071 total
includes taxes & fees
Dec 16 - Dec 17
Salish Inn

Rosario Village

Rosario Village
2.0 star property
Eastsound
7.2 out of 10, Good, (78)
Minutes from Rosario Mansion Museum and Cascade Lake, this beach hotel offers free WiFi and parking. After exploring nearby hiking and biking trails, relax in the seasonal outdoor pool or plan a kayaking adventure from the convenient location.

"Great stay nice room view all good."
United States
Daniel
The price is ¥20,316
¥26,314 total
includes taxes & fees
Dec 17 - Dec 18
Rosario Village

Fidalgo Country Inn

Fidalgo Country Inn
2.0 star property
Anacortes
7.4 out of 10, Good, (612)
"Staff awesome, clean room, and lots of room"
United States
Retta
The price is ¥11,078
¥12,586 total
includes taxes & fees
Dec 16 - Dec 17
Fidalgo Country Inn
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
Save an average of 15% on thousands of hotels when you're signed in

Stay near popular Pacific Northwest attractions

Learn more about San Juan Island

San Juan Island entices visitors with its quaint harbor towns, forest trails and the chance to see a range of wildlife, including endangered orcas.

San Juan Island featuring a marina, boating and sailing

Top San Juan Island Hotel Reviews

More cheap stays in San Juan Island

Hotels in San Juan Island with star-rating

Explore a world of travel with Expedia