A lakeside lodge with a wooden pier, surrounded by lush greenery and a forested backdrop.

Find 3 Star Hotels in San Juan Island, WA from ¥23,448

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Check availability on San Juan Island 3 Star Hotels

Tonight
Aug 6 - Aug 7
Tomorrow
Aug 7 - Aug 8
This weekend
Aug 7 - Aug 9
Next weekend
Aug 14 - Aug 16

Our top choices for San Juan Island 3-star hotels

1. Anacortes Ship Harbor Inn

Anacortes Ship Harbor Inn
Anacortes
United States
Lisa
¥21,144
¥23,448 total
includes taxes & fees
Sep 1 - Sep 2
Anacortes Ship Harbor Inn

2. Lopez Islander Resort

Lopez Islander Resort
Lopez Island
United States
Lana
¥37,683
¥41,584 total
includes taxes & fees
Aug 17 - Aug 18
Lopez Islander Resort

3. Earthbox Inn & Spa

Earthbox Inn & Spa
Friday Harbor
United States
Nicole
¥44,936
¥49,723 total
includes taxes & fees
Aug 23 - Aug 24
Earthbox Inn & Spa

4. Outlook Inn

Outlook Inn
Eastsound
United States
Amado
¥66,356
¥75,589 total
includes taxes & fees
Sep 2 - Sep 3
Outlook Inn

5. Friday Harbor House

Friday Harbor House
Friday Harbor
United States
Robert
¥93,072
¥102,984 total
includes taxes & fees
Aug 16 - Aug 17
Friday Harbor House

6. Deer Harbor Inn

Deer Harbor Inn
Deer Harbor
United States
Trisha
¥45,220
¥49,901 total
includes taxes & fees
Aug 9 - Aug 10
Deer Harbor Inn

7. Roche Harbor Resort

Roche Harbor Resort
Friday Harbor
United States
Nicco
¥49,830
¥57,737 total
includes taxes & fees
Sep 1 - Sep 2
Roche Harbor Resort

8. Landmark Inn on Orcas Island

Landmark Inn on Orcas Island
Eastsound
United States
David
Landmark Inn on Orcas Island

9. Trumpeter Inn

Trumpeter Inn
Friday Harbor
United States
Rene
¥46,189
¥50,970 total
includes taxes & fees
Aug 9 - Aug 10
Trumpeter Inn

10. Kangaroo House B&B on Orcas Island

Kangaroo House B&B on Orcas Island
Eastsound
United States
Bob
¥42,878
¥47,316 total
includes taxes & fees
Aug 20 - Aug 21
Kangaroo House B&B on Orcas Island

11. Nantucket Inn

Nantucket Inn
Anacortes
United States
Mike
¥31,377
¥34,797 total
includes taxes & fees
Aug 26 - Aug 27
Nantucket Inn

12. Inn to the Woods B&B

Inn to the Woods B&B
Friday Harbor
United States
Lisa
Inn to the Woods B&B

13. Friday Harbor Grand B&B

Friday Harbor Grand B&B
Friday Harbor
United States
Amy
¥56,080
¥62,053 total
includes taxes & fees
Aug 9 - Aug 10
Friday Harbor Grand B&B

14. West Beach Resort

West Beach Resort
Eastsound
United States
lorrie
¥64,802
¥71,509 total
includes taxes & fees
Aug 11 - Aug 12
West Beach Resort

15. The Bluff on Whidbey B&B

The Bluff on Whidbey B&B
Oak Harbor
United States
THOMAS
The Bluff on Whidbey B&B

16. @ Marbella Lane Wave HS W/ev Charger, Oceanfront!

@ Marbella Lane Wave HS W/ev Charger, Oceanfront!
Oak Harbor
¥46,797
¥107,257 total
includes taxes & fees
Aug 24 - Aug 25
@ Marbella Lane Wave HS W/ev Charger, Oceanfront!

17. Oak Harbor Hideaway - 5 Mi to Deception Pass!

Oak Harbor Hideaway - 5 Mi to Deception Pass!
Oak Harbor
Oak Harbor Hideaway - 5 Mi to Deception Pass!

18. Kingfish at West Sound

Kingfish at West Sound
Eastsound
United States
Yoav
Kingfish at West Sound

19. Penn Cove Overlook by Avantstay Cabin w/ Views

Penn Cove Overlook by Avantstay Cabin w/ Views
Oak Harbor
United States
Kathlynn Leilani
Penn Cove Overlook by Avantstay Cabin w/ Views

20. Swan Lake Cottage by Avantstay Views + Firepit

Swan Lake Cottage by Avantstay Views + Firepit
Oak Harbor
United States
Vienna
Swan Lake Cottage by Avantstay Views + Firepit
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Explore similar 4-star hotels

Many 4-star hotels have the same amenities as 3-star hotels. See all 4-star hotels in San Juan Island.
Tucker House Inn

Tucker House Inn

275 C Street Friday Harbor WA
¥44,094
¥48,789 total
Aug 9 - Aug 10
includes taxes & fees
9.2/10 Wonderful! (294 reviews)
Tucker House Inn
Otters Pond Bed & Breakfast

Otters Pond Bed & Breakfast

100 Tomihi Dr Eastsound WA
Get ratesOtters Pond Bed & Breakfast
Majestic Inn & Spa

Majestic Inn & Spa

419 Commercial Avenue Anacortes WA
Get ratesMajestic Inn & Spa
Still don't see what you're looking for?
See all properties in San Juan Island.
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Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Learn more about San Juan Island

San Juan Island entices visitors with its quaint harbor towns, forest trails and the chance to see a range of wildlife, including endangered orcas.

See all hotels in San Juan Island
A marina with numerous boats docked, a wooden pier, and a forested hill in the background.

Top San Juan Island Hotel Reviews

Trumpeter Inn

Trumpeter Inn

10/10 Excellent
"This Inn is fantastic! The owners/staff are wonderful, the fresh hime made Breakfasts and snacks are delicious, the beds were very comfy and the setting in the quiet valley was spectacular! We can’t wait to return to this little slice of heaven here on earth!"
Scott R 5-night trip
Posted 2 days ago
Trumpeter Inn
Roche Harbor Resort

Roche Harbor Resort

10/10 Excellent
"We had a corner suite with a clear view of the marina. Spacious & updated. The staff was very informative and perfession."
Fred 2-night trip
Posted 2 days ago
Roche Harbor Resort
Earthbox Inn & Spa

Earthbox Inn & Spa

10/10 Excellent
"The hotel is about a 10 minute walk from the entrance of Friday Harbor. The walk is slightly uphill but anyone in moderate shape will find it easy. If you have a roller bag it is a bit bumpy but totally manageable. On the way to the hotel, you’ll pass through the main area of town which is a nice intro to the many shops and restaurants. We found the room not luxurious, but modern, clean and had everything you’d need: Shampoo - wall mounted shower dispenser Conditioner - wall mounted shower dispenser Body wash - wall mounted shower dispenser Liquid hand soap Pump lotion bottle 1 bar soap 1 shower cap 1 makeup remover towel Plenty of hand, face and bath towels A good, con air hairdryer with a concentrator. Best part - the hair dryer is NOT attached to the wall. Iron + board Robes Keurig coffee maker - but there’s an on site coffee shop too. The clock on the nightstand had two USB A ports but they charged slowly. A fridge and a microwave The room itself only had one wall outlet. Luckily we had our travel power strip, and that came in very handy. Most, if not all, of the rooms have a balcony with two chairs and a little table - we didn’t use it but a nice touch. The staff at the front desk were nice and helpful to give local suggestions on where to eat and places of interest. As mentioned the hotel is on the Main Street - about 10 minutes from the main town so very accessible to all the restaurants, shops and bars. The check in was easy. 24 hours before check"
Samta 2-night trip
Posted 5 days ago
Earthbox Inn & Spa

Frequently asked questions

How much does it cost to stay in a 3-star hotel in San Juan Island?
To lock in an economical 3-star hotel in San Juan Island, try Expedia's convenient filter tool. Decide on your budget, choose your preferred amenities and much more. Additionally, you can display your search results so the cheapest properties appear on top.
  • Search for the lowest price per night right now from ¥48,789
What is the difference between a 4-star and 3-star hotel in San Juan Island?
Relaxation is easy to find in 3-star hotels in San Juan Island. Besides comfortable surroundings, these more cost-effective lodgings include a host of welcome amenities like WiFi, coffee and tea maker and on-site gym. A 4-star hotel offers a more sophisticated experience with superior features such as an on-site spa, outdoor or indoor swimming pool and bigger rooms. Regardless of your preferred hotel category or budget, we have a perfect fit for you.
What is the difference between a 3-star hotel and a motel in San Juan Island?
Motels generally offer lower rates than hotels, which makes them perfect if you're traveling around San Juan Island and sticking to a budget. A sought-after pick for overnight trips, these roadside getaways come with simply furnished rooms, limited services and ample parking. Choose a 3-star hotel and you can expect to pay extra for additional comfort, privacy and conveniences. Travelers can make use of things like a lobby, free WiFi and business services at this style of property.

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