Best Apartments in San Juan Island for Your Vacation from

A lakeside lodge with a wooden pier, surrounded by lush greenery and a forested backdrop.

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Our top choices for San Juan Island apartments

1. Madrona Suite - Summer on Orcas Island- rest where sea meets stillness

Eastsound

Heather H.

￥73,088 total

includes taxes & fees

Sep 22 - Sep 23

2. Heart of Deer Harbor - Harbormaster House

Deer Harbor

Cndi B.

￥122,160 total

includes taxes & fees

Sep 27 - Sep 28

A lakeside view with a dock and chairs, surrounded by greenery and trees.

3. Studio Unit with Views of Hales Passage and Mt Baker

Lummi Island

Damon

￥27,284 total

includes taxes & fees

Aug 31 - Sep 1

4. Sunny Island Cliff Side Views

Anacortes

Taryn H.

￥51,793 total

includes taxes & fees

Sep 1 - Sep 2

5. Happy Valley Studio - Peaceful rest in nature, just 5 minutes from downtown!

Anacortes

Shawna

￥24,342 total

includes taxes & fees

Sep 8 - Sep 9

6. Sea View Inn Summary:

Anacortes

Pamela W.

￥48,435 total

includes taxes & fees

Sep 14 - Sep 15

7. Home Away From Home… for you and for your pets!

Oak Harbor

Ina T.

￥100,783 total

includes taxes & fees

Sep 1 - Sep 2

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Top San Juan Island Hotel Reviews

The Orca Inn

10/10 Excellent

"I liked the place It was very affordable and a nice walk to the harbor. Work or maintenance was a bit loud in the morning, but overall I loved the place"

Friday Harbor House

8/10 Good

"The staff here is the best! From Tara at the front desk to Austin as a server and many more. They went out of their way to talk and make sure all our needs were met. Beds were comfortable room designs are a bit dated and not well thought out. No real amenities here but a wonderful restaurant. Some issues with housekeeping leaving towels but not making the beds but were corrected when asked."

Snug Harbor Resort

10/10 Excellent

"Our stay at Snug Harbor came at the end of a 10 day trip around the northwest and couldn't have been a more perfect ending. The setting was stunning and the tranquility was serene. The grounds were excellently manicured and the scent of the lavender was divine. Our cabin was very comfortable, clean, and well-appointed. Convenient parking right by our cabin was a plus, as was the availability of food and pastries in the shop. If we didn't live on the other side of the country, we'd certainly be back soon, but even with the distance, we're hoping to return again someday in the not-too-distant future. It was amazing."

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Change your mind

Treat yourself

Be picky

Check prices for these dates

Our top choices for San Juan Island apartments

1. Madrona Suite - Summer on Orcas Island- rest where sea meets stillness

2. Heart of Deer Harbor - Harbormaster House