Find hotels in San Juan Islands, WA from ¥19,443

  • Change your mind

    Book hotels with free cancellation
  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
  • Be picky

    Search almost a million properties worldwide

Check prices for these dates

This weekend
Next weekend

Filter by

Guest rating
Guest rating
Star rating

Our top choices for San Juan Islands hotels

The Orca Inn

The Orca Inn
2.0 star property
Friday Harbor
7.8 out of 10, Good, (10 reviews)
"Everything was awesome clean small but that’s what I expected and very nice staff"
United States
Ashley
The price is ¥19,656
¥21,749 total
includes taxes & fees
Jun 22 - Jun 23
The Orca Inn

Rosario Village

Rosario Village
2.0 star property
Eastsound
7.6 out of 10, Good, (117 reviews)
"Property was clean with an amazing view. Very comfortable and well maintained"
United States
Blake
The price is ¥24,301
¥30,816 total
includes taxes & fees
Jun 7 - Jun 8
Rosario Village

The Edenwild Boutique Inn

The Edenwild Boutique Inn
2.5 star property
Lopez Island
9.4 out of 10, Exceptional, (264 reviews)
"The hotel is very nice - neat, clean and quiet"
United States
John A
The price is ¥24,546
¥27,087 total
includes taxes & fees
Jun 10 - Jun 11
The Edenwild Boutique Inn

Deer Harbor Inn

Deer Harbor Inn
3.0 star property
Deer Harbor
8.4 out of 10, Very Good, (207 reviews)
"Very quiet and uncrowded. Matthew's BBQ/SMOKE HOUSE restaurant and the music were great 👍"
United States
Theodore
The price is ¥36,265
¥40,019 total
includes taxes & fees
Jun 11 - Jun 12
Deer Harbor Inn

Outlook Inn

Outlook Inn
3.0 star property
Eastsound
9.2 out of 10, Wonderful, (515 reviews)
"Beautiful, clean room with great view of the sound and all East Sound restaurants, bars and Crescent each within walking distance."
United States
Brian
The price is ¥62,124
¥70,955 total
includes taxes & fees
Jun 15 - Jun 16
Outlook Inn

Earthbox Inn & Spa

Earthbox Inn & Spa
3.0 star property
Friday Harbor
8.8 out of 10, Excellent, (1,002 reviews)
"Clean, nice staff , excellent location"
United States
Karen
The price is ¥33,602
¥37,181 total
includes taxes & fees
Jun 24 - Jun 25
Earthbox Inn & Spa

Snug Harbor Resort

Snug Harbor Resort
2.5 star property
Friday Harbor
9.8 out of 10, Exceptional, (517 reviews)
"Serene and cozy resort."
United States
Toshimasa
The price is ¥71,844
¥79,281 total
includes taxes & fees
Jun 28 - Jun 29
Snug Harbor Resort

Discovery Inn

Discovery Inn
2.0 star property
Friday Harbor
10.0 out of 10, Exceptional, (11 reviews)
"We’ve already recommended this place to friends. Best place to stay in Friday Harbor."
United States
Launa
The price is ¥36,996
¥40,936 total
includes taxes & fees
Jun 11 - Jun 12
Discovery Inn

Lopez Islander Resort

Lopez Islander Resort
3.5 star property
Lopez Island
8.6 out of 10, Excellent, (379 reviews)
"Large balcony, clean bathrooms and price."
United States
Gage
The price is ¥28,642
¥31,607 total
includes taxes & fees
Jun 8 - Jun 9
Lopez Islander Resort

Bird Rock Hotel

Bird Rock Hotel
2.0 star property
Friday Harbor
8.8 out of 10, Excellent, (369 reviews)
"Very nice and helpful staff! I love the location of this hotel it is so convenient. "
United States
XIN
The price is ¥28,802
¥31,869 total
includes taxes & fees
Jun 10 - Jun 11
Bird Rock Hotel

Friday Harbor Suites

Friday Harbor Suites
2.5 star property
Friday Harbor
8.6 out of 10, Excellent, (1,003 reviews)
"Conveniently located, spacious rooms, good facilities make this hotel a better option to stay in Friday Harbor."
United States
paresh
The price is ¥27,751
¥30,707 total
includes taxes & fees
Jun 8 - Jun 9
Friday Harbor Suites

West Beach Resort

West Beach Resort
3.5 star property
Eastsound
9.4 out of 10, Exceptional, (119 reviews)
"Cozy and roomy cabin. Great stay. "
United States
lorrie
The price is ¥55,843
¥61,624 total
includes taxes & fees
Jun 10 - Jun 11
West Beach Resort

Kangaroo House B&B on Orcas Island

Kangaroo House B&B on Orcas Island
3.5 star property
Eastsound
10.0 out of 10, Exceptional, (172 reviews)
"Jill and Charles were the BEST hosts!! The breakfast was fabulous! the property is beautiful and so quiet! Rooms are cozy and comfy!! They were so helpful and were so kind to us as we had to check out early and had our breakfast ready! Great place and we will be back...!!!"
United States
Angela
The price is ¥41,806
¥46,133 total
includes taxes & fees
Jun 9 - Jun 10
Kangaroo House B&B on Orcas Island

Saturn's Return

Saturn's Return
2.0 star property
Friday Harbor
9.6 out of 10, Exceptional, (24 reviews)
"Great place to stay in San Juan island. Very quiet and tranquil, and the breakfast was amazing. "
United States
Stanyslav
The price is ¥65,414
¥72,184 total
includes taxes & fees
Jun 21 - Jun 22
Saturn's Return

Friday Harbor House

Friday Harbor House
3.5 star property
Friday Harbor
9.6 out of 10, Exceptional, (272 reviews)
"The hotel was lovely with a beautiful view of the harbor."
United States
Lisa
The price is ¥81,941
¥90,668 total
includes taxes & fees
Jun 9 - Jun 10
Friday Harbor House

Tucker House Inn

Tucker House Inn
4.0 star property
Friday Harbor
9.2 out of 10, Wonderful, (290 reviews)
"Beautiful property, wonderful staff, excellent amenities and service. Proximity to downtown and SJI brewery and ferry was big bonus. Many thx for a wonderful stay."
United States
Kao Bin
The price is ¥49,245
¥54,489 total
includes taxes & fees
Jun 24 - Jun 25
Tucker House Inn

FairBridge Inn Express Bellingham

FairBridge Inn Express Bellingham
2.0 star property
Sehome
4.0 out of 10, (1 review)
"This is a Days Inn that is becoming a Fair Bridge. Rooms are not that nice: no cups in the room, sink is dripping below, and the best part- drops of blood on one of the towels in our room. Not making that up. Pool is in complete disrepair; hotel needs a major overhaul."
United States
Kenneth
The price is ¥13,662
¥15,659 total
includes taxes & fees
Jun 7 - Jun 8
FairBridge Inn Express Bellingham

Super 8 by Wyndham Bellingham Airport/Ferndale

Super 8 by Wyndham Bellingham Airport/Ferndale
2.0 star property
Ferndale
6.2 out of 10, (1,000 reviews)
"The breakfast was much better than expected!"
United States
Leon
The price is ¥10,881
¥12,078 total
includes taxes & fees
Jun 11 - Jun 12
Super 8 by Wyndham Bellingham Airport/Ferndale

Shamrock Motel

Shamrock Motel
2.0 star property
Birchwood
7.0 out of 10, Good, (23 reviews)
"The place is ran down and they have people living in rooms. Broken cars at the motel."
Canada
Richard
The price is ¥9,413
¥10,458 total
includes taxes & fees
Jun 9 - Jun 10
Shamrock Motel

Coachman Inn

Coachman Inn
2.5 star property
Sehome
9.4 out of 10, Exceptional, (1,087 reviews)
"The staff were incredibly friendly, I will definitely stay there again"
Canada
klay
The price is ¥12,792
¥14,692 total
includes taxes & fees
Jun 9 - Jun 10
Coachman Inn
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
Save an average of 15% on thousands of hotels when you're signed in

Stay near popular San Juan Islands attractions

Learn more about San Juan Islands

Kayaking between forested islands reveals hidden coves and curious seals, while orcas breach offshore during whale-watching tours. Hike Mount Constitution on Orcas Island for sweeping views, then explore Friday Harbor's galleries and savor fresh-caught seafood at waterfront restaurants.

Top San Juan Islands Hotel Reviews

More cheap stays in San Juan Islands

Hotels in San Juan Islands with star-rating

Explore a world of travel with Expedia