
Nagasaki Prefecture Mountain Vacations
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Top Mountain vacation packages in Nagasaki Prefecture
Price found within the past 48 hours. Click for updated prices.


Unzen Miyazaki Ryokan
Price was ¥114,813, price is now ¥96,333 per person
¥96,333
per person
Jun 23 - Jun 25
found 5 hours ago
Roundtrip flight included
Tokyo (HND) to Nagasaki (NGS)
9.4/10 Exceptional! (35 reviews)
Exceptional in every way. Attention to detail is amazing. From the front desk reception to Mr Kinoshita who
Reviewed on Mar 28, 2026
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View all trips4 Night Mountain vacations in Nagasaki Prefecture
Price found within the past 48 hours. Click for updated prices.

APA Hotel Nagasaki Ekiminami
Price was ¥52,801, price is now ¥43,032 per person
¥43,032
per person
May 13 - May 17
found 7 hours ago
Roundtrip flight included
Tokyo (TYO) to Nagasaki (NGS)
8/10 Very Good! (779 reviews)
APA was just a 10 minute walk from the train station. The room was very nice, would definitely come back.
Reviewed on Oct 10, 2025


APA Hotel Nagasaki Ekimae
Price was ¥55,808, price is now ¥45,104 per person
¥45,104
per person
May 13 - May 17
found 7 hours ago
Roundtrip flight included
Tokyo (TYO) to Nagasaki (NGS)
7.6/10 Good! (1,000 reviews)
APA is a great hotel, right across from the nagasaki station. The bed was very comfortable.
Reviewed on Dec 27, 2025
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View all tripsTop Mountain Nagasaki Prefecture Hotels

Unzen Miyazaki Ryokan
320 Unzen Obama-cho Unzen Nagasaki-ken
The price is ¥55,594 per night from Apr 15 to Apr 16
¥55,594
¥68,723 total
Apr 15 - Apr 16
Stay at this ryokan in Unzen. Enjoy free WiFi, hot springs on site, and room service. Popular attractions Vidoro Museum and Unzen Jigoku Hell are located ...
9.4/10 Exceptional! (37 reviews)
Exceptional in every way. Attention to detail is amazing. From the front desk reception to Mr Kinoshita who
Reviewed on Mar 28, 2026

Inasayama Kanko Hotel
Akebono-machi 40-23 Nagasaki
The price is ¥8,395 per night from Mar 30 to Mar 31
¥8,395
¥9,328 total
Mar 30 - Mar 31
Stay at this hotel in Nagasaki. Enjoy free WiFi, private hot tubs, and 3 bars/lounges. Popular attractions Mt. Inasayama Observatory and Fuchi-jinja are located ...
8.6/10 Excellent! (362 reviews)
A bit of the beaten path but a very nice hotel that seems like it has been around for a long time. The staff were very kind and the room was very nice and parking was abundant. We didn't stay too long here but it was convenient for us who drove in to stay overnight. It is worth considering that there ...
Reviewed on Mar 8, 2026

Hotel Saint Paul Nagasaki
Yon-Jyuroku Nagasaki Nagasaki-ken
The price is ¥7,273 per night from Apr 5 to Apr 6
¥7,273
¥8,800 total
Apr 5 - Apr 6
Stay at this hotel in Nagasaki. Enjoy free WiFi, breakfast (surcharge), and parking (surcharge). Popular attractions Nagasaki Atomic Bomb Museum and Nagasaki ...
7.8/10 Good! (78 reviews)
Clean a little different setup for a hotel.
Reviewed on Feb 25, 2026
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
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