Find Boutique Hotels in Sandakan

Start date: Check-in selected.
To Date
End date: Check-out

  • Change your mind

    Book hotels with free cancellation

  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
    Sign in

  • Be picky

    Search almost a million properties worldwide

Check availability on Sandakan Boutique Hotels

No exact matches found, but these alternatives could be just right

Recommended hotels in Sandakan

3 restaurants, breakfast served
The Elopura Hotel

The Elopura Hotel

The Elopura Hotel
3.0 star property
Sandakan
8.0 out of 10, Very Good, (56)
"A convenient hotel for a night before you head off on other adventures. "
Australia
Nicholas
The price is ￥7,880
￥8,953 total
includes taxes & fees
Jan 13 - Jan 14, 2026
The Elopura Hotel
Outdoor pool, sun loungers
Sabah Hotel Sandakan

Sabah Hotel Sandakan

Sabah Hotel Sandakan
4.0 star property
Sandakan
8.6 out of 10, Excellent, (363)
"Great hotel. Lovely peaceful room. Staff very helpful"
United Kingdom
Linda
The price is ￥12,927
￥14,443 total
includes taxes & fees
Dec 16 - Dec 17
Sabah Hotel Sandakan
Exterior
Sanbay Hotel

Sanbay Hotel

Sanbay Hotel
3.0 star property
Sandakan
7.8 out of 10, Good, (35)
"Good bang for your buck if you just need a quick night stay! Clean and easy check in process with nice helpful staff. "
United States
Kristy
Sanbay Hotel
Reception
Capital O 90939 Sandakan Central Hotel

Capital O 90939 Sandakan Central Hotel

Capital O 90939 Sandakan Central Hotel
2.0 star property
Sandakan
8.0 out of 10, Very Good, (2)
"For the area of Sandakan that this hotel is in this is a pretty good option if you really have to stay here! I would not recommend the area at all. The staff here were very attentive and friendly. The room was adequate but the pillows were horrendous! Just lumpy lumps of hard sponge! The shower and sink use a pump system which was not smooth at all and you either had a ‘power’ shower or a trickle. The hotel is near the Central Market, Harbour Mall & the promenade plus local shops but don’t get...
United Kingdom
C
The price is ￥3,978
￥4,888 total
includes taxes & fees
Dec 15 - Dec 16
Capital O 90939 Sandakan Central Hotel
Front of property - evening/night
Tanini Sepilok (Formerly Nature Lodge Sepilok)

Tanini Sepilok (Formerly Nature Lodge Sepilok)

Tanini Sepilok (Formerly Nature Lodge Sepilok)
2.5 star property
Sandakan
8.8 out of 10, Excellent, (74)
"Comfortable room in this affordable property close to Sepilok."
Australia
Karen
The price is ￥9,136
￥10,293 total
includes taxes & fees
Jan 12 - Jan 13, 2026
Tanini Sepilok (Formerly Nature Lodge Sepilok)
Executive Suite, Multiple Beds, Non Smoking | Individually furnished, desk, blackout drapes, iron/ironing board
Hotel Meliden

Hotel Meliden

Hotel Meliden
2.0 star property
Sandakan
The price is ￥4,313
￥5,042 total
includes taxes & fees
Dec 21 - Dec 22
Hotel Meliden
Reception
The Pavilion Hotel

The Pavilion Hotel

The Pavilion Hotel
3.0 star property
Sandakan
7.2 out of 10, Good, (77)
"Love t room. Comfortable & clean"
Malaysia
Felicia
The price is ￥4,499
￥5,271 total
includes taxes & fees
Jan 1 - Jan 2, 2026
The Pavilion Hotel
Exterior
Hotel Lutana

Hotel Lutana

Hotel Lutana
2.5 star property
Sandakan
8.0 out of 10, Very Good, (3)
"Fantastic"
Australia
George
The price is ￥1,820
￥2,349 total
includes taxes & fees
Dec 15 - Dec 16
Hotel Lutana
Bar (on property)
My Dream Hotel

My Dream Hotel

My Dream Hotel
3.0 star property
Sandakan
7.2 out of 10, Good, (40)
"If you don't mind of sharing toilet, the property is clean and acceptable standard"
Malaysia
Chung Fai
The price is ￥4,315
￥5,530 total
includes taxes & fees
Dec 16 - Dec 17
My Dream Hotel
Reception
Gloria Swiss Hotel & Apartment Sandakan

Gloria Swiss Hotel & Apartment Sandakan

Gloria Swiss Hotel & Apartment Sandakan
3.0 star property
Sandakan
7.4 out of 10, Good, (15)
"very good place to stay provided you have own transport"
Malaysia
aaron chong en
Gloria Swiss Hotel & Apartment Sandakan
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
View all properties

Top Sandakan Hotel Reviews

Explore a world of travel with Expedia

Frequently asked questions

What's there to see and do in Sandakan?
The ocean views, temples, and wildlife are just some of the things to enjoy while you're in the area. Activities and attractions to experience around Sandakan include Sandakan Harbour Mall, Borneo Sun Bear Conservation Centre, and Sepilok Orangutan Rehabilitation Centre. You might also like to explore more of the area and take in additional sights like Rainforest Discovery Centre, Libaran Island Jetty, and Gomantong Caves while you're here.
What kind of weather should I plan for when I travel to Sandakan?
Getting an idea of what to expect from the weather in Sandakan will help you enjoy your stay to the fullest. The hottest months are usually May and June with an average temp of 81°F, while the coldest months are February and January with an average of 80°F. The snowiest months in Sandakan are April, May, August, and July, with each month seeing an average of 83 inches of snowfall.
What's the best way to get to my boutique hotel in Sandakan?
You have a few options for getting to Sandakan. The closest major airport is Sandakan (SDK), which is located 5.5 mi (8.9 km) from the heart of the city. If you'd like to venture out around the area, you may want a rental car for your journey.