A lighthouse on a rocky coastline with the ocean in the foreground.

Apartments in San Juan Islands for Rent

  • Change your mind

    Book hotels with free cancellation
  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
  • Be picky

    Search almost a million properties worldwide

Check prices for these dates

In two weeks
In two months
In three months
In four months

Our top choices for San Juan Islands apartments

1. Dog Friendly Studio with Kitchenette, WiFi, Yard and Fire Pit near Eastsound Beach

Dog Friendly Studio with Kitchenette, WiFi, Yard and Fire Pit near Eastsound Beach
Eastsound
9.2 out of 10, Wonderful, (76 reviews)
"The little house was a comfortable and clean stay."
United States
Lyn W.
The price is ¥15,950
¥40,158 total
includes taxes & fees
Oct 19 - Oct 20
Dog Friendly Studio with Kitchenette, WiFi, Yard and Fire Pit near Eastsound Beach

2. Heart of Deer Harbor - Harbormaster House

Heart of Deer Harbor - Harbormaster House
Deer Harbor
10.0 out of 10, Exceptional, (4 reviews)
"Loved the house! Beautiful view, nicely decorated, very comfortable. Will definitely stay here again!"
United States
Cndi B.
The price is ¥46,593
¥101,641 total
includes taxes & fees
Oct 19 - Oct 20
Heart of Deer Harbor - Harbormaster House

3. Madrona Suite - Summer on Orcas Island- rest where sea meets stillness

Madrona Suite - Summer on Orcas Island- rest where sea meets stillness
Eastsound
10.0 out of 10, Exceptional, (28 reviews)
"My husband and I had a lovely stay. The property is beautiful and quiet. Jodi was communicative and accommodating."
United States
Heather H.
The price is ¥37,416
¥60,309 total
includes taxes & fees
Oct 5 - Oct 6
Madrona Suite - Summer on Orcas Island- rest where sea meets stillness

4. Hobby Farm Hideaway: Quiet, Private Guest Suite with Yard in Ferndale, WA

Hobby Farm Hideaway: Quiet, Private Guest Suite with Yard in Ferndale, WA
Ferndale
9.0 out of 10, Wonderful, (6 reviews)
"Cameron was super friendly and accommodating. The place was just what we needed for one night. It was private and well taken care of. Looking forward to coming back. "
United States
Josefine V.
The price is ¥12,550
¥20,535 total
includes taxes & fees
Sep 24 - Sep 25
Hobby Farm Hideaway: Quiet, Private Guest Suite with Yard in Ferndale, WA

5. Sunny Island Cliff Side Views

Sunny Island Cliff Side Views
Anacortes
9.8 out of 10, Exceptional, (57 reviews)
"Absolutely lovely"
United States
Taryn H.
The price is ¥26,900
¥47,198 total
includes taxes & fees
Sep 29 - Sep 30
Sunny Island Cliff Side Views

6. Studio with covered deck and Birch Bay View

Studio with covered deck and Birch Bay View
Blaine
7.6 out of 10, Good, (4 reviews)
"Great weather and great locatio6"
United States
michael c.
The price is ¥12,707
¥32,086 total
includes taxes & fees
Oct 12 - Oct 13
Studio with covered deck and Birch Bay View

7. Sea View Inn Summary:

Sea View Inn Summary:
Anacortes
9.2 out of 10, Wonderful, (47 reviews)
"The hosts were very welcoming and accommodating. The space was perfect for our family and pets. The view was incredible. "
United States
Pamela W.
The price is ¥21,649
¥39,292 total
includes taxes & fees
Sep 23 - Sep 24
Sea View Inn Summary:

8. Happy Valley Studio - Peaceful rest in nature, just 5 minutes from downtown!

Happy Valley Studio - Peaceful rest in nature, just 5 minutes from downtown!
Anacortes
10.0 out of 10, Exceptional, (37 reviews)
"Great location. I would stay here again. "
United States
Holly J.
The price is ¥18,826
¥23,978 total
includes taxes & fees
Sep 28 - Sep 29
Happy Valley Studio - Peaceful rest in nature, just 5 minutes from downtown!

9. Creekside Studio- right across from the Beach.

Creekside Studio- right across from the Beach.
Birch Bay
9.4 out of 10, Exceptional, (20 reviews)
"The place was in tip top new condition. We enjoyed the nearby town of Blaine and the restaurants there. Took day trips to Mt Baker, Vancouver, and Friday Harbor in the San Juan Islands."
United States
James
The price is ¥12,427
¥38,682 total
includes taxes & fees
Oct 21 - Oct 22
Creekside Studio- right across from the Beach.

10. Nestled across from beach, find a versatile studio.

Nestled across from beach, find a versatile studio.
Blaine
10.0 out of 10, Exceptional, (1 review)
"This place was perfect for my stay in Birch Bay / Blaine while I attended a workshop. There was plenty of kitchen ware, a nice Keurig machine, an induction plate, air fryer and toaster oven. I would happily stay here again!"
United States
Kathy M.
The price is ¥10,982
¥30,041 total
includes taxes & fees
Sep 23 - Sep 24
Nestled across from beach, find a versatile studio.

11. Sunny Queen Bed Room|Pool|Free Wifi

Sunny Queen Bed Room|Pool|Free Wifi
Sehome
The price is ¥12,551
¥14,484 total
includes taxes & fees
Oct 1 - Oct 2
Sunny Queen Bed Room|Pool|Free Wifi

12. Downstairs@TheVictorian: Downtown and Dog-Friendly

Downstairs@TheVictorian: Downtown and Dog-Friendly
York
10.0 out of 10, Exceptional, (28 reviews)
"Great location, cute yard, and a very nice kitchen :)"
United States
David K.
The price is ¥16,237
¥41,775 total
includes taxes & fees
Sep 24 - Sep 25
Downstairs@TheVictorian: Downtown and Dog-Friendly

13. Home Away From Home… for you and for your pets!

Home Away From Home… for you and for your pets!
Oak Harbor
9.0 out of 10, Wonderful, (18 reviews)
"Beautiful place and gorgeous view. I would like to stay there again next year"
United States
Ina T.
The price is ¥63,536
¥99,314 total
includes taxes & fees
Sep 23 - Sep 24
Home Away From Home… for you and for your pets!

14. Downtown Bellingham Apartment

Downtown Bellingham Apartment
Lettered Streets
10.0 out of 10, Exceptional, (85 reviews)
"Although the place was very spacious and it had coffee and some treats, it is located in an edgy part of town with some riff-raf wandering around and it is not walkable to too much. The apartment is outfitted by someone’s grandmother."
United States
David
The price is ¥15,688
¥26,463 total
includes taxes & fees
Oct 13 - Oct 14
Downtown Bellingham Apartment

15. 900 square foot Studio loft in Fairhaven

900 square foot Studio loft in Fairhaven
South Bellingham
10.0 out of 10, Exceptional, (83 reviews)
"Convenient to everything and such a perfect spot to land! So many awesome books. The beds were incredibly comfortable."
United States
Magayr
The price is ¥20,865
¥45,356 total
includes taxes & fees
Sep 30 - Oct 1
900 square foot Studio loft in Fairhaven

16. The Sweet Suite at The Dolls' Dome-ane on historic Chuckanut Drive

The Sweet Suite at The Dolls' Dome-ane on historic Chuckanut Drive
Bellingham
10.0 out of 10, Exceptional, (30 reviews)
"Charming property, comfy, clean and well appointed."
United States
Sara M.
The price is ¥28,238
¥44,721 total
includes taxes & fees
Sep 23 - Sep 24
The Sweet Suite at The Dolls' Dome-ane on historic Chuckanut Drive

17. Downstairs Thevictorian Downtown and Dog-friendly

Downstairs Thevictorian Downtown and Dog-friendly
2.0 star property
York
The price is ¥24,676
¥45,966 total
includes taxes & fees
Sep 24 - Sep 25
Downstairs Thevictorian Downtown and Dog-friendly

18. Spacious 2-bed Room|Pool|Free Wifi

Spacious 2-bed Room|Pool|Free Wifi
Sehome
The price is ¥13,805
¥15,877 total
includes taxes & fees
Oct 1 - Oct 2
Spacious 2-bed Room|Pool|Free Wifi

19. Ground Floor 2 bed Condo at Jacob's Landing

Ground Floor 2 bed Condo at Jacob's Landing
Blaine
10.0 out of 10, Exceptional, (2 reviews)
"Great listing, perfectly matched the description and an incredible location. Host was very responsive, friendly, and accommodating. We hope to return!"
United States
Max C.
The price is ¥17,257
¥59,293 total
includes taxes & fees
Oct 13 - Oct 14
Ground Floor 2 bed Condo at Jacob's Landing

20. Cute Cottage with fully fenced yard, covered back patio with firepit.

Cute Cottage with fully fenced yard, covered back patio with firepit.
Blaine
The price is ¥18,826
¥51,272 total
includes taxes & fees
Sep 30 - Oct 1
Cute Cottage with fully fenced yard, covered back patio with firepit.
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
Save an average of 15% on thousands of hotels when you're signed in

Top San Juan Islands Hotel Reviews

Find out more about San Juan Islands

San Juan Islands Apartments information

Number of reviews
1
Accommodation
39 Apartments
Lowest Price
¥45,966
Highest Price
¥56,098

Explore a world of travel with Expedia