A lighthouse on a rocky coastline with the ocean in the foreground.

Apartments in San Juan Islands for Rent

  • Change your mind

    Book hotels with free cancellation

  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
    Sign in

  • Be picky

    Search almost a million properties worldwide

Check prices for these dates

In two weeks
Oct 2 - Oct 4
In two months
Nov 13 - Nov 15
In three months
Dec 11 - Dec 13
In four months
Jan 8 - Jan 10

Our top choices for San Juan Islands apartments

Exterior

1. Dog Friendly Studio with Kitchenette, WiFi, Yard and Fire Pit near Eastsound Beach

Dog Friendly Studio with Kitchenette, WiFi, Yard and Fire Pit near Eastsound Beach
Eastsound
9.2 out of 10, Wonderful, (76 reviews)
"Peaceful and quiet spot in the woods yet near the Ferry and Lake Killebrew! The owners art is on display. Another wonderful relaxing stay for this return customer."
United States
Joshua F.
The price is ￥15,906
￥41,303 total
includes taxes & fees
Oct 20 - Oct 21
Dog Friendly Studio with Kitchenette, WiFi, Yard and Fire Pit near Eastsound Beach
Property grounds

2. Ocean View Studio with Private Balcony Near Moran State Park

Ocean View Studio with Private Balcony Near Moran State Park
Eastsound
8.6 out of 10, Excellent, (21 reviews)
"Beautiful spot"
United States
Pam
The price is ￥24,400
￥62,533 total
includes taxes & fees
Sep 20 - Sep 21
Ocean View Studio with Private Balcony Near Moran State Park
Property grounds

3. Madrona Suite - Summer on Orcas Island- rest where sea meets stillness

Madrona Suite - Summer on Orcas Island- rest where sea meets stillness
Eastsound
10.0 out of 10, Exceptional, (28 reviews)
"My husband and I had a lovely stay. The property is beautiful and quiet. Jodi was communicative and accommodating."
United States
Heather H.
The price is ￥41,573
￥63,486 total
includes taxes & fees
Oct 5 - Oct 6
Madrona Suite - Summer on Orcas Island- rest where sea meets stillness
Outdoor dining

4. Heart of Deer Harbor - Harbormaster House

Heart of Deer Harbor - Harbormaster House
Deer Harbor
10.0 out of 10, Exceptional, (4 reviews)
"Loved the house! Beautiful view, nicely decorated, very comfortable. Will definitely stay here again!"
United States
Cndi B.
The price is ￥46,593
￥101,641 total
includes taxes & fees
Oct 19 - Oct 20
Heart of Deer Harbor - Harbormaster House
Outdoor dining

5. Sunny Island Cliff Side Views

Sunny Island Cliff Side Views
Anacortes
9.8 out of 10, Exceptional, (57 reviews)
"Absolutely lovely"
United States
Taryn H.
The price is ￥26,826
￥46,754 total
includes taxes & fees
Sep 20 - Sep 21
Sunny Island Cliff Side Views
Property grounds

6. Happy Valley Studio - Peaceful rest in nature, just 5 minutes from downtown!

Happy Valley Studio - Peaceful rest in nature, just 5 minutes from downtown!
Anacortes
10.0 out of 10, Exceptional, (37 reviews)
"Great location. I would stay here again. "
United States
Holly J.
The price is ￥18,826
￥23,978 total
includes taxes & fees
Sep 21 - Sep 22
Happy Valley Studio - Peaceful rest in nature, just 5 minutes from downtown!
Terrace/patio

7. Sea View Inn Summary:

Sea View Inn Summary:
Anacortes
9.2 out of 10, Wonderful, (47 reviews)
"The hosts were very welcoming and accommodating. The space was perfect for our family and pets. The view was incredible. "
United States
Pamela W.
The price is ￥21,649
￥39,292 total
includes taxes & fees
Sep 22 - Sep 23
Sea View Inn Summary:
2 bedrooms, desk, WiFi (free), bed sheets

8. 900 square foot Studio loft in Fairhaven

900 square foot Studio loft in Fairhaven
South Bellingham
10.0 out of 10, Exceptional, (81 reviews)
"Convenient to everything and such a perfect spot to land! So many awesome books. The beds were incredibly comfortable."
United States
Magayr
The price is ￥20,865
￥45,356 total
includes taxes & fees
Sep 20 - Sep 21
900 square foot Studio loft in Fairhaven
Property grounds

9. The Sweet Suite at The Dolls' Dome-ane on historic Chuckanut Drive

The Sweet Suite at The Dolls' Dome-ane on historic Chuckanut Drive
Bellingham
10.0 out of 10, Exceptional, (30 reviews)
"Charming property, comfy, clean and well appointed."
United States
Sara M.
The price is ￥28,238
￥44,721 total
includes taxes & fees
Sep 20 - Sep 21
The Sweet Suite at The Dolls' Dome-ane on historic Chuckanut Drive
Dining

10. Full Apt with large kitchen across the street from the beach.

Full Apt with large kitchen across the street from the beach.
Blaine
10.0 out of 10, Exceptional, (3 reviews)
"This is a very comfortable apartment with an amazingly stocked kitchen. Everything we needed was there. It is steps from the bay, and a quick walk to the state park. I would definitely stay here again!"
United States
Carla G.
The price is ￥10,197
￥34,843 total
includes taxes & fees
Sep 20 - Sep 21
Full Apt with large kitchen across the street from the beach.
Coffee/tea maker, fridge, microwave, oven

11. Downtown Bellingham Apartment

Downtown Bellingham Apartment
Lettered Streets
10.0 out of 10, Exceptional, (85 reviews)
"Although the place was very spacious and it had coffee and some treats, it is located in an edgy part of town with some riff-raf wandering around and it is not walkable to too much. The apartment is outfitted by someone’s grandmother."
United States
David
The price is ￥15,688
￥27,561 total
includes taxes & fees
Oct 13 - Oct 14
Downtown Bellingham Apartment
Exterior

12. Downstairs@TheVictorian: Downtown and Dog-Friendly

Downstairs@TheVictorian: Downtown and Dog-Friendly
York
10.0 out of 10, Exceptional, (28 reviews)
"Great location, cute yard, and a very nice kitchen :)"
United States
David K.
The price is ￥19,453
￥46,496 total
includes taxes & fees
Sep 24 - Sep 25
Downstairs@TheVictorian: Downtown and Dog-Friendly
Smart TV

13. Hobby Farm Hideaway: Quiet, Private Guest Suite with Yard in Ferndale, WA

Hobby Farm Hideaway: Quiet, Private Guest Suite with Yard in Ferndale, WA
Ferndale
8.8 out of 10, Excellent, (5 reviews)
"Cameron was super friendly and accommodating. The place was just what we needed for one night. It was private and well taken care of. Looking forward to coming back. "
United States
Josefine V.
The price is ￥12,550
￥20,535 total
includes taxes & fees
Sep 24 - Sep 25
Hobby Farm Hideaway: Quiet, Private Guest Suite with Yard in Ferndale, WA
Smart TV, fireplace

14. Galbraith Mountain Forest Escape

Galbraith Mountain Forest Escape
Bellingham
10.0 out of 10, Exceptional, (22 reviews)
"Great experience!! We felt very taken care of and glad to stay. We will stay again next time."
United States
Eric F.
The price is ￥37,981
￥76,376 total
includes taxes & fees
Sep 20 - Sep 21
Galbraith Mountain Forest Escape
Iron/ironing board, travel crib, WiFi, bed sheets

15. Studio with covered deck and Birch Bay View

Studio with covered deck and Birch Bay View
Blaine
7.6 out of 10, Good, (4 reviews)
"Great weather and great locatio6"
United States
michael c.
The price is ￥12,707
￥31,930 total
includes taxes & fees
Oct 12 - Oct 13
Studio with covered deck and Birch Bay View
Beach nearby

16. Secluded Dog Friendly Studio with Hot Tub and Beach Access in Coupeville

Secluded Dog Friendly Studio with Hot Tub and Beach Access in Coupeville
Coupeville
9.0 out of 10, Wonderful, (59 reviews)
"Great "
United States
Susan L.
The price is ￥17,640
￥47,020 total
includes taxes & fees
Sep 20 - Sep 21
Secluded Dog Friendly Studio with Hot Tub and Beach Access in Coupeville
Terrace/patio

17. Creekside Studio- right across from the Beach.

Creekside Studio- right across from the Beach.
Birch Bay
9.4 out of 10, Exceptional, (20 reviews)
"The place was in tip top new condition. We enjoyed the nearby town of Blaine and the restaurants there. Took day trips to Mt Baker, Vancouver, and Friday Harbor in the San Juan Islands."
United States
James
The price is ￥12,394
￥38,577 total
includes taxes & fees
Oct 15 - Oct 16
Creekside Studio- right across from the Beach.
House | 1 bedroom, high-speed internet

18. Downstairs Thevictorian Downtown and Dog-friendly

Downstairs Thevictorian Downtown and Dog-friendly
2.0 star property
York
The price is ￥26,402
￥47,886 total
includes taxes & fees
Sep 24 - Sep 25
Downstairs Thevictorian Downtown and Dog-friendly
Living area

19. Walk-Everywhere Patio Suite with King Bed, Parking and Fenced Yard

Walk-Everywhere Patio Suite with King Bed, Parking and Fenced Yard
Sehome
10.0 out of 10, Exceptional, (20 reviews)
"Location is awesome, the hosts responsiveness and information sheet on local spots to eat was great. "
United States
Kate R.
The price is ￥21,963
￥49,260 total
includes taxes & fees
Oct 15 - Oct 16
Walk-Everywhere Patio Suite with King Bed, Parking and Fenced Yard
Exterior

20. Upstairs at TheVictorian - Lush, Walkable, and Dog-Friendly Retreat - Steps from Downtown Bellingham

Upstairs at TheVictorian - Lush, Walkable, and Dog-Friendly Retreat - Steps from Downtown Bellingham
York
9.8 out of 10, Exceptional, (25 reviews)
"A sweet house with a great location. We enjoyed our stay!"
United States
Greg R.
The price is ￥24,003
￥52,627 total
includes taxes & fees
Oct 20 - Oct 21
Upstairs at TheVictorian - Lush, Walkable, and Dog-Friendly Retreat - Steps from Downtown Bellingham
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
View all properties
Save an average of 15% on thousands of hotels when you're signed in
Sign in
Sign up, it's free

Top San Juan Islands Hotel Reviews

Discovery Inn

Discovery Inn

10/10 Excellent
"Clean room. Nice complimentary toiletries. Close to downtown."
Shantae 1-night trip
Posted less than an hour ago
Discovery Inn

Find out more about San Juan Islands

San Juan Islands Apartments information

Number of reviews
532
Accommodation
39 Apartments
Lowest Price
￥20,535
Highest Price
￥101,641

Explore a world of travel with Expedia