
Nagasaki Prefecture Vacations & Trips from ¥67,684
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Top destinations in Nagasaki Prefecture
The Latest Nagasaki Prefecture Vacation Packages
Price found within the past 48 hours. Click for updated prices.

Hotel JAL City Nagasaki
Nagasaki Chinatown
¥67,684
per person
Oct 16 - Oct 19
found 17 hours ago
Roundtrip flight included
Tokyo (TYO) to Nagasaki (NGS)
8.4/10 Very Good! (527 reviews)
Nice sized room with space to move around. Everything you need in room. Lovely breakfast. Friendly staff. Easy location with public transport. Lots of nearby restaurants etc
Reviewed on May 8, 2026


ROYAL CHESTER NAGASAKI hotel & retreat
¥107,512
per person
Nov 10 - Nov 12
found 1 day ago
Roundtrip flight included
Tokyo (NRT) to Nagasaki (NGS)
8.4/10 Very Good! (78 reviews)
The hotel was lovely with spacious guest rooms with lots of luxurious details. The room lacked practical facilities like a place to put your clothes or suitcases which meant it looked cluttered all the time. The front desk staff were pleasant when they were there but seldom were able to be helpful. We were told that none of the restaurants on the property were open despite their posted hours, there was no option to send out laundry and even that there were no umbrellas available to borrow during a downpour. It was comical after a while! All in all, too much focus on luxury and not enough on the daily details.
Reviewed on Mar 20, 2025


Setre Glover's House Nagasaki
¥85,424
per person
Oct 26 - Oct 29
found 1 day ago
Roundtrip flight included
Tokyo (TYO) to Nagasaki (NGS)
10/10 Exceptional! (1 review)
飲み物やお菓子のサービスが充実しており、ラウンジで休憩できたのが良かったです。
子どもたちは軽食サービスの角煮とお菓子に大喜びでした。
大浦天主堂やグラバー園にも近く、散歩しながら快適に観光できました。ランタンまつりの会場や軍艦島ミュージアムにも歩いていけたので子連れにおすすめです。コンビニも近いです。
Reviewed on Feb 27, 2026
Where to stay in Nagasaki Prefecture
Find the best Nagasaki Prefecture areas and neighborhoods for the activities you enjoy most.Learn more about Nagasaki Prefecture
Learn more about Nagasaki Prefecture





Nagasaki Chinatown
It’s bright and bold and provides an exciting perspective on the city. Walk through this area to experience various businesses and cultural aspects.
Obama Onsen
While there might not be top attractions in Obama Onsen, you can explore the larger area and discover places like Unzen Jigoku Hell and Nitta Toge.


Photo by 上条ジョー


Dejimamachi
While visiting Dejimamachi, you might make a stop by sights like Nagasaki Dejima and Dejima Museum.
Nagasaki Prefecture Hotel Deals

Hotel Nikko Huis Ten Bosch
6 Huis Ten Bosch Sasebo Nagasaki-ken
Fully refundableReserve now, pay when you stay
¥18,909
¥22,880 total
Sep 8 - Sep 9
8.8/10 Excellent! (1,353 reviews)
"Staff services"
Reviewed on Aug 2, 2026

Hotel Okura JR Huis Ten Bosch
10 Huis Ten Bosch cho Sasebo Nagasaki
Fully refundableReserve now, pay when you stay
¥12,806
¥16,200 total
Sep 30 - Oct 1
9.2/10 Wonderful! (1,004 reviews)
"Good location, nice view, had shuttle boat service to the park"
Reviewed on Sep 6, 2026

Toyoko Inn Tsushima Izuhara
771-1 Imayashiki, Izuhara-machi Tsushima Nagasaki
¥9,221
¥10,223 total
Sep 7 - Sep 8
8.8/10 Excellent! (927 reviews)
"Staff was very helpful with check-in. Breakfast was a usual Asian breakfast. It was prepared well and tasted good."
Reviewed on Apr 10, 2026
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
Frequently asked questions
How much does a Nagasaki Prefecture vacation package cost?
Choose from any combination of flights, hotels and car rentals, and you can be vacationing in Nagasaki Prefecture from just ¥67,684. And the more you bundle, the more you save. Your dream escape has never been more affordable.
How do I get a cheap travel package to Nagasaki Prefecture?
Just think of all the fun things you could do in Nagasaki Prefecture with a wad of extra cash in your pocket. Watch your savings stack up when you combine your hotel and flights into a Nagasaki Prefecture vacation package. You have loads of choice when you book your trip with Expedia too. In fact, you can choose from more than 550 air carriers and 1,000,000 hotels across the globe. Whether you're heading off with the entire family or surprising your special someone, exploring Nagasaki Prefecture is better with a package.
Where should I stay in Nagasaki Prefecture?
If you've always dreamed of exploring Nagasaki Atomic Bomb Museum and Glover Garden, Nagasaki is calling your name.
What are the top hotels in Nagasaki Prefecture?
Look up Quintessa Hotel Sasebo and Smile Hotel Sasebo. They're the first choice for many travelers headed to Nagasaki. If Sasebo is on your travel itinerary, Toyoko Inn Sasebo Ekimae and Hotel Resol Sasebo are both great options.
How far in advance should I book my Nagasaki Prefecture vacation?
To bag cheap prices, book ASAP. Airlines usually release tickets, along with some of the lowest fares, around a year in advance. Hotels, car rental and activities should also be booked well in advance so you can have the pick of the bunch. If you've decided on a last-minute getaway in Nagasaki Prefecture, there are always plenty of great deals on Expedia. Book your escape today!
What does an Expedia Nagasaki Prefecture travel package include?
That's up to you. You can select from a range of Nagasaki Prefecture bundles, such as a rental car, flight and hotel. You can also book a flight and a hotel, or a rental car with a flight. Once you've made your booking, you can add on the fun stuff like tours and activities. Whatever your Nagasaki Prefecture break looks like, you're sure to save!
What should I know before booking a Nagasaki Prefecture travel package?
A travel package can be easier on the bank balance than separately booking everything you need for your escape. For example, combine your hotels, flights and rental cars and save a packet. Whatever your vacation plans, you're sure to find a package that's perfect for you.
If I'm not able to travel, can I cancel my Nagasaki Prefecture vacation package?
It's difficult to predict what tomorrow might bring, so it's comforting to know that you can change or cancel your Nagasaki Prefecture vacation package. If your booking was made in the last 24 hours, you may be eligible for a refund. If it's an older booking, your airline, hotel or car rental company may charge a fee. Visit our Customer Service Portal for more information.
Stay near popular Nagasaki Prefecture attractions

Huis Ten Bosch
9.0/10 (984 reviews)
Bring the family to Huis Ten Bosch and enjoy the excitement of this theme park in Sasebo. Stroll along the seaside or visit the spas while you're in the area.

Unzen Jigoku Hell
8.6/10 (113 reviews)
Learn about the local history of Unzen when you take a trip to Unzen Jigoku Hell. Discover the area's volcano viewpoints and countryside.

Nagasaki Atomic Bomb Museum
9.0/10 (545 reviews)
The atomic bomb’s shock factor never lessens with time. A walk through this building makes sure it’s not forgotten. Comprehend this horrific event by visiting here.

Glover Garden
8.4/10 (741 reviews)
Climb the hill and be treated to two features: a panoramic city view and estates of wealthy magnates. The harbor activity below is fascinating to watch.

Peace Park
8.6/10 (719 reviews)
At this spot, as reverent a place as you can find anywhere, reflect on one of the worst events to happen to humankind and the dire importance of it never being repeated.

Shianbashi Alley
7.0/10 (12 reviews)
During your trip to Nagasaki, you can find the perfect gifts to bring home at Shianbashi Alley. Stroll along the waterfront or experience the area's museums.
Nagasaki Dejima
8.2/10 (731 reviews)
Learn about the local history of Nagasaki when you take a trip to Nagasaki Dejima. Amble around the area's Chinatown or visit its shops.
Intuji Port
7.0/10 (6 reviews)
Explore the waterfront in Iki with a trip to Intuji Port. Take in the museums and mountain views in the area.
What to do in Nagasaki Prefecture

Gunkanjima Digital Museum Attraction Ticket
¥1,865
per adult

Nagasaki Historical Highlights Private Car Tour With Local Guide
¥18,400
per adult
Explore a world of travel with Expedia
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* Savings based on package bookings compared to the price of the same components booked separately. Savings not available on all packages.









