Top 10 Hotels in Isahaya from ￥6,338 - Competitive Prices

An aerial view of a rural landscape with fields, a small town, and distant mountains.

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Our top choices for Isahaya hotels

A spacious buffet area with multiple serving stations, a variety of food items, and a modern interior design.

A well-lit store with multiple display counters and a cash register area.

A large indoor swimming pool with a circular shape, surrounded by tiled walls and a high ceiling.

A spacious lobby with a long bench, seating area, and potted plants.

1. Hotel Nikko Huis Ten Bosch

Sasebo

Walter

￥18,909

￥22,880 total

Sep 29 - Sep 30

A large, historic building with multiple stories, a prominent central tower, and a well-maintained garden in front.

A modern interior with a reception desk, a decorative plant arrangement, and a traditional vase.

A modern hotel lobby with a large glass window offering a view of traditional houses and a body of water. There are two people seated at a table with a fruit bowl and a bottle.

A hotel room with two beds, a balcony with a view, a dining area, and a sliding door leading to another room.

2. Hotel Okura JR Huis Ten Bosch

Sasebo

Ker

￥13,597

￥17,201 total

Sep 30 - Oct 1

A hot spring surrounded by rocks and vegetation, with a wooden structure on the left and lanterns along the edge.

A modern reception area with a wooden reception desk, two wall-mounted lamps, and a large abstract metallic wall art piece.

A modern hotel with a large glass facade, a pool in the foreground, and a well-lit interior with seating areas.

A modern building with a flat roof, large windows, and a seating area with chairs and tables.

3. Hoshino Resorts KAI Unzen

Unzen

Gabrielle

A multi-story building with a flat facade, balconies, and a parking lot in front.

A room with two ping pong tables, a red chair, and exercise bikes.

A hotel room with two beds, a desk with a computer, a sink, and an air conditioning unit.

A spacious lobby with a reception desk, leather seating area, and ping pong tables.

4. Tennen Onsen Hotel Kinshai

Isahaya

HIROKI

￥9,300

￥10,300 total

Oct 4 - Oct 5

A view through a window with a view of a garden with various trees and bushes.

A modern lobby with seating areas, a bar, and a bookshelf.

A modern hotel lobby with a mix of seating areas, including sofas and tables, and a view of a garden through large windows.

A chef performing a flambé with fire on a table.

5. Hotel Flags Ishihaya Nagasaki

Isahaya

cat

￥7,430

￥8,172 total

Sep 30 - Oct 1

A hotel room with a bed, a desk, a chair, a window with a city view, and a wall-mounted TV.

A reception desk with a computer, a plant, and a cash register.

A restaurant with a buffet counter, wooden flooring, and pendant lighting.

A store with shelves of folded clothing and a map on the wall.

6. Super Hotel Nagasaki Isahaya Natural Hot Spring

Isahaya

KITANO

￥11,105

￥12,254 total

Oct 12 - Oct 13

A buffet with a variety of food items, a seating area with chairs, and a view of the city through large windows.

A spacious lobby with a polished marble floor, a central seating area, and a high ceiling with recessed lighting.

A multi-story hotel with a prominent vertical light feature on the facade, surrounded by trees and streetlights.

A traditional Japanese-style room with two beds, a wooden chair, a small table, and a large window with a view.

7. THE GLOBAL VIEW Nagasaki

Nagasaki

Chris

￥9,118

￥10,030 total

Sep 27 - Sep 28

A modern indoor pool with a view of a bridge and mountains.

A modern hotel room with a large bed, a sofa, a small table, and a chair. The room has a large window with a city view.

A spacious lobby with a high ceiling, a central seating area with sofas and a coffee table, and a large abstract painting on the wall.

A hotel room with a large window offering a view of a densely populated hillside cityscape.

8. STADIUM CITY HOTEL NAGASAKI

Nagasaki

Sergio

￥13,331

￥15,049 total

Sep 28 - Sep 29

A spacious hotel lobby with a polished floor, seating areas, and a central chandelier.

A multi-story building with a prominent 'HamaCross 411' sign, a 'Y! mobile' store, and a tram station with a pedestrian crossing.

A buffet area with multiple food stations, including hot and cold options, and a variety of serving utensils.

A modern hotel entrance with glass doors, a visible reception area, and the name 'HOTEL FORZA' on the facade.

9. Hotel Forza Nagasaki

Nagasaki

Eamon

￥7,729

￥8,502 total

Sep 27 - Sep 28

A multi-story hotel with a modern design, featuring a prominent entrance and a sign indicating it is a hotel.

A hotel room with a bed, a desk with a computer, a chair, and a window with curtains.

A bento box with rice, macaroni, vegetables, and fried items.

A multi-story hotel with a modern design, featuring a prominent entrance and multiple balconies.

10. New Station Hotel Premiere

Isahaya

James

￥8,963

￥9,859 total

Sep 27 - Sep 28

A modern spa area with a hot tub, reclining chairs, a flat-screen TV, and a view of greenery through large windows.

A modern spa area with lounge chairs, a heated floor, a sauna, and a wall with a vertical garden.

A modern interior with a bar area, seating with round tables, and a view through large windows.

A modern bathroom with a freestanding bathtub, a shower area, and a glass door leading to an outdoor area.

11. FAV LUX NAGASAKI

Nagasaki

Esslyn

￥13,584

￥15,330 total

Oct 1 - Oct 2

A modern living room with a large window, a sofa set, and a coffee table.

A modern hallway with glass panels and a central seating area with a golden statue.

A spacious living area with a large window, a sofa set, a coffee table, and a bar area with stools.

A balcony with a view of a cityscape and a body of water at dusk.

12. Nagasaki Marriott Hotel

Nagasaki

Cynthia

￥16,200

￥20,493 total

Sep 30 - Oct 1

A hotel lobby with a reception desk, seating area, and large windows.

A buffet line with various food items and condiments.

A laundry facility with multiple coin-operated washers and dryers, a step for access, and a potted plant.

13. Hotel Route-Inn Isahaya Inter

Isahaya

?????

￥12,285

￥13,635 total

Sep 28 - Sep 29

A modern waiting area with two sofas, a coffee table, and a reception desk with computers.

A hotel room with two beds, a desk with a computer, a chair, a television, and a window with curtains.

A multi-story hotel with a modern design, featuring a flat facade and numerous windows.

A meal in a compartmentalized container with rice, macaroni, vegetables, and fried items.

14. New Station Hotel

Isahaya

Kenji

￥9,028

￥9,998 total

Sep 27 - Sep 28

A modern building entrance with a set of stairs leading to a glass door entrance.

A reception area with a wooden reception desk, a seating area with a sofa, and a bookshelf.

A laundry room with washing machines, a dryer, and two chairs.

A hotel room with a sofa, two beds, a TV, and a window with curtains.

15. Isahaya Terminal Hotel

Isahaya

koujirou

￥10,254

￥11,345 total

Oct 26 - Oct 27

A modern building with a glass-enclosed swimming pool and a view of the water.

A modern hotel entrance with illuminated signage, a clean facade, and a well-lit pathway leading to the entrance.

A modern hotel corridor with large windows offering city views, a wooden ceiling, and a sign reading "SKY SPA MOME".

A modern hotel room with large windows, a balcony with seating, and a city view.

16. Candeo Hotels Nagasaki Shinchi Chinatown

Nagasaki Chinatown

Camilla

￥11,118

￥12,530 total

Sep 27 - Sep 28

A modern hotel lobby with a reception desk, glass doors, and a clean, tiled floor.

A hotel building with a sign in Japanese.

A hotel room with two single beds, a large decorative wall panel, and a small bedside table.

A buffet setup with various food items and beverages.

17. JR KYUSHU HOTEL Nagasaki

Nagasaki

Maria A

￥8,509

￥9,360 total

Sep 27 - Sep 28

A modern multi-story building with a parking lot in front.

A modern bathroom with multiple sinks, mirrors, and hand dryers.

A hotel room with a bed, a desk with a chair, a television, and a mirror.

A reception desk at KIKITSU STATION HOTEL with a digital clock, a phone, and a pen holder.

18. KIKITSU Station Hotel

Isahaya

Barb

￥8,713

￥9,584 total

Oct 11 - Oct 12

A room with a large window offering a view of a lush green landscape, a wooden table with a vase, and a curtain partially drawn.

A modern living room with a red sofa, a glass coffee table, a TV mounted on a wooden panel, and a view of the outdoors through a window with curtains.

An outdoor deck with wicker furniture, a wooden table, and umbrellas.

A modern hotel room with a brown velvet sofa, a small coffee table, a flat-screen TV, and a kitchenette area with wooden cabinets and a microwave.

19. Morino Villa & Resort

Isahaya

Maximo

￥12,464

￥13,710 total

Sep 30 - Oct 1

A modern reception area with a glass partition, a reception desk, seating area, and large windows.

A modern multi-story building with balconies, large windows, and a flat roof.

A modern bathroom with a bathtub, a sink, and a toilet.

A buffet setup with various food items, a white tablecloth-covered table, and a modern interior with large windows and ceiling lights.

20. Omura Station Hotel Nagasaki Airport

Omura

Kazuhiko

￥9,505

￥10,455 total

Sep 27 - Sep 28

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Stay near popular Isahaya attractions

Isahaya Park

8.4/10 (11 reviews)

Built on ancient Isahaya Castle ruins, this park features the stunning Megane Bridge and 600-year-old camphor tree. Visit in April when thousands of azaleas transform the landscape during the annual festival.

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Todoroki Fall

6.0/10 (1 review)

This 12-meter waterfall creates a thunderous roar as it cascades into crystal-clear pools below. Explore the surrounding valley's lush trails, where 30 smaller falls create a tranquil forest symphony.

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Konagai Culture Hall

6.0/10 (2 reviews)

This community hub hosts local events and offers a welcoming library for quiet study. Look for the whimsical fruit-shaped bus stops nearby—they make for delightful photo opportunities.

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Kantaku no Sato

7.4/10 (3 reviews)

This educational complex showcases Isahaya Bay's reclamation history and marine life through its Kantaku Museum and Mutsugoro Aquarium. Enjoy horseback riding, boating, or a 100-meter zipline in the adventure park.

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Kannonji Temple

6.0/10 (1 review)

Kannonji Temple offers a serene retreat with traditional Buddhist architecture in Isahaya City, Nagasaki. Visit in early morning to experience the peaceful grounds and cultural artifacts in contemplative solitude.

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Sazanka Herb Museum

7.0/10 (2 reviews)

This fragrant highland garden showcases a diverse collection of aromatic herbs in a serene setting. Explore the grounds, join an aroma class, or savor herbal teas at the garden café after your botanical journey.

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Moriyama Folk Museum

8.0/10 (2 reviews)

Learn about the local history of Isahaya with a stop at Moriyama Folk Museum. Discover the area's mountain views and monuments.

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Ikoinomori Takaki

Escape to Ikoinomori Takaki, a serene park where locals unwind among lush greenery in Isahaya. Bring a picnic to enjoy under the trees during spring when the natural scenery is most captivating.

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Learn more about Isahaya

Discover the ancient Isahaya Spectacles Bridge and explore Isahaya Park's cherry blossoms in spring for iconic photo opportunities. Nearby Unzen-Amakusa National Park offers volcanic hiking trails, while Isahaya's summer festivals showcase traditional dance performances and local seafood specialties.

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A stone bridge over a calm river with lush greenery and clear blue sky.

Top Isahaya Hotel Reviews

THE GLOBAL VIEW Nagasaki

10/10 Excellent

"Very nice would stay here again."

Dormy Inn Nagasakiekimae Hot Springs

10/10 Excellent

"My BFF and I went to explore Nagasaki Dormy never disappoints This is a premiere and we really enjoyed it…not sure of isffeeence The location was good We saw the one in Chinatown It looked similar? The room was good size for Japan Onsen was clean and excellent The breakfast was delish Love the little touches: like ice cream next to onsen A book library with a nice view and massage chairs before or after onsen! And location was central to everything we wanted to visit Bus stop, train station and trolley stop all in walking distance 7-11 attached to hotel which was convenient Staff was polite and friendly Not a lot of English but accommodating We miss it cuz it was so nice to go back to a comfy hotel at end of day and soak in Onsen!"

Belleview Nagasaki Dejima

10/10 Excellent

"A very friendly and wel ome staff and front desk with management care and hospitality. Lool.forward to future booking in a tranquility and peaceful hotel"

Nagasaki Marriott Hotel

10/10 Excellent

"Very modern, spacious, and clean, conveniently located next to Nagasaki Station"

Hotel Nikko Huis Ten Bosch

8/10 Good

"Staff services"

Hotel Rotterdam Huis Ten Bosch

8/10 Good

"Breakfast was limited to 1 main choice and allowed one piece of meat, either mackerel , chicken or sausage. The bread was big so we should be allowed to take more proteins. It should not restricted to 1 piece. Other than that, hotel was in a good location nearby to Huis Ten Bosch."

Hotel Europe Huis Ten Bosch

10/10 Excellent

"とても良い気分で過ごすことができました。"

More cheap stays in Isahaya

Hotel 21

8-13 Mezamemachi Nagasaki Nagasaki

￥6,146

￥6,962 total

Sep 28 - Sep 29

5.2/10 (15 reviews)

Grand Base Nagasaki City

2 39 Tamazonomachi Nagasaki Nagasaki Prefecture

￥9,326

￥10,259 total

Sep 29 - Sep 30

8.2/10 Very Good! (126 reviews)

Jisco Hotel Obama Onsen

Obamacho Minamihonmachi - 145-2 Unzen Nagasaki

￥9,233

￥10,284 total

Oct 9 - Oct 10

Tennen Onsen Hotel Kinshai

22-12 Saiwaimachi Isahaya Nagasaki

￥9,300

￥10,300 total

Oct 4 - Oct 5

8.2/10 Very Good! (33 reviews)

Isahaya Terminal Hotel

18-1 Eishohigashimachi Isahaya Nagasaki

￥10,254

￥11,345 total

Oct 26 - Oct 27

HOTEL URO - hostel

6-10 Kajiya-machi Nagasaki Nagasaki

￥12,040

￥13,300 total

Sep 30 - Oct 1

9/10 Wonderful! (2 reviews)

Hotels in Isahaya with star-rating

Frequently asked questions

What's the best place for a stay in Isahaya?

Based on our traveler data, New Station Hotel Premiere is one of the top choices for your stay. This hotel offers free parking and free WiFi. Tennen Onsen Hotel Kinshai is another good choice for your visit. See all available top hotels, or vacation rentals in Isahaya.

What are some of the best vacation rentals that Isahaya has to offer?

Rakuten STAY HOUSE x WILLSTYLE SASEBO: This vacation home rental near Isahaya has air-conditioning and laundry facilities to help you feel perfectly comfortable in your new surroundings. Kitchen amenities include a fridge, a stovetop, and a microwave. See all vacation rentals in Isahaya.

If I need to cancel my hotel reservation in Isahaya, will I receive a refund?

Yes! The majority of hotel bookings are fully refundable if you cancel before the accommodation's cancellation deadline, which is often 24 or 48 hours before check in. If you have a non-refundable reservation, you might be able to still cancel and receive a refund within a 24-hour period of your booking. Filter your search by fully refundable to find flexible hotel deals in Isahaya.

Where can I learn more about changing or cancelling my trip to Isahaya?

To access more information about updating your trip to Isahaya or cancelling it, click here.

Where is the best hotel to stay with easy access to Kantaku no Sato?

Hotel Flags Ishihaya Nagasaki is one of the top choices for your stay based on our traveler data, and this 3-star hotel offers a restaurant and free parking. It's located 2.2 mi (3.5 km) from Kantaku no Sato. Other good options within a few miles include New Station Hotel and New Station Hotel Premiere.

What about the best place to stay near Isahaya Park?

One of the top choices for your stay is New Station Hotel Residence, located next to Isahaya Park, and this 3-star hotel offers free WiFi and parking. Hotel Flags Ishihaya Nagasaki and New Station Hotel are a couple of other good options close by.

What are some accommodations with pools in Isahaya?

STADIUM CITY HOTEL NAGASAKI: Provides a children's pool, an indoor pool, and 5 restaurants. View all hotels with pools in Isahaya.

What is the best spa hotel in Isahaya?

Super Hotel Nagasaki Isahaya Natural Hot Spring is a top spa hotel with 152 rooms, free WiFi, and off-street parking. Treat yourself to the hot springs at the on-site spa. See all spa hotels in Isahaya.

What's the best hotel for staying near Nagasaki Airport (NGS)?

Chisun Inn Nagasaki Airport is a popular 3-star hotel featuring free WiFi and free parking. It's located a short 1.6 mi (2.6 km) from Nagasaki Airport. Other choices close to the airport are Omura Station Hotel and Omura Station Hotel.

What's it like to stay in Isahaya?

Visitors can enjoy all that Isahaya has to offer including the parks and monuments. In Isahaya, there are 19 hotels and other accommodations to choose from. Find out more about Isahaya.

What should I see while I'm in Isahaya?

Landmarks like Isahaya Park, Kannonji Temple, and Kantaku no Sato might be worth a visit. Natural beauty is on display at Todoroki Fall, Tsukinooka Park, and Ikoinomori Takaki. A couple of additional sights to add to your agenda are Konagai Culture Hall and Megane Bridge. Check out what more to see and do in Expedia's Isahaya guide.

What's the seasonal weather like in Isahaya?

The hottest months are usually August and July with an average temp of 77°F, while the coldest months are January and February with an average of 48°F. The rainiest months in Isahaya are June, July, August, and May, with each month seeing an average of 15 inches of rainfall.

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Find hotels in Isahaya from ￥6,338

Change your mind

Treat yourself

Be picky

Go beyond your typical stay in Isahaya

Check prices for these dates

Filter by

Property class

Guest rating

Our top choices for Isahaya hotels

1. Hotel Nikko Huis Ten Bosch

2. Hotel Okura JR Huis Ten Bosch

3. Hoshino Resorts KAI Unzen

4. Tennen Onsen Hotel Kinshai

5. Hotel Flags Ishihaya Nagasaki

6. Super Hotel Nagasaki Isahaya Natural Hot Spring

7. THE GLOBAL VIEW Nagasaki

8. STADIUM CITY HOTEL NAGASAKI

9. Hotel Forza Nagasaki

10. New Station Hotel Premiere

11. FAV LUX NAGASAKI

12. Nagasaki Marriott Hotel

13. Hotel Route-Inn Isahaya Inter

14. New Station Hotel

15. Isahaya Terminal Hotel

16. Candeo Hotels Nagasaki Shinchi Chinatown

17. JR KYUSHU HOTEL Nagasaki

18. KIKITSU Station Hotel

19. Morino Villa & Resort

20. Omura Station Hotel Nagasaki Airport

Stay near popular Isahaya attractions

Isahaya Park

Todoroki Fall

Konagai Culture Hall

Kantaku no Sato

Kannonji Temple

Sazanka Herb Museum

Moriyama Folk Museum

Ikoinomori Takaki

Learn more about Isahaya

Top Isahaya Hotel Reviews

THE GLOBAL VIEW Nagasaki

Dormy Inn Nagasakiekimae Hot Springs

Belleview Nagasaki Dejima

Nagasaki Marriott Hotel

Hotel Nikko Huis Ten Bosch

Hotel Rotterdam Huis Ten Bosch

Hotel Europe Huis Ten Bosch

More cheap stays in Isahaya

Hotel 21

Grand Base Nagasaki City

Jisco Hotel Obama Onsen

Tennen Onsen Hotel Kinshai

Isahaya Terminal Hotel

HOTEL URO - hostel

Hotels in Isahaya with star-rating

Frequently asked questions

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