Find hotels in Harpers Ferry, IA from ￥9,289

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Dec 26 - Dec 27
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Dec 27 - Dec 28
This weekend
Dec 26 - Dec 28
Next weekend
Jan 2 - Jan 4

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Our top choices for Harpers Ferry hotels

Terrace/patio
Comfort Inn & Suites Marquette - Prairie du Chien

Comfort Inn & Suites Marquette - Prairie du Chien

Comfort Inn & Suites Marquette - Prairie du Chien
2.5 star property
Marquette
9.0 out of 10, Wonderful, (956)
"Nice spot for traveling out of"
United States
Stan
The price is ￥11,797
￥13,213 total
includes taxes & fees
Jan 26 - Jan 27, 2026
Comfort Inn & Suites Marquette - Prairie du Chien
Balcony
Trickling Waters Retreat

Trickling Waters Retreat

Trickling Waters Retreat
3.0 star property
Marquette
9.8 out of 10, Exceptional, (284)
Escape to this tranquil lodge featuring a soothing hot tub and garden terrace. Convenient in-room refrigerators and microwaves enhance your stay near Marquette Depot Museum. Enjoy complimentary WiFi and parking while exploring nearby wildlife areas.
"Nice place to stay and the host was great and very accommodating!"
United States
Scott
The price is ￥13,879
￥15,544 total
includes taxes & fees
Dec 28 - Dec 29
Trickling Waters Retreat
Reception
Boarders Inn & Suites by Cobblestone Hotels – Waukon

Boarders Inn & Suites by Cobblestone Hotels – Waukon

Boarders Inn & Suites by Cobblestone Hotels – Waukon
3.5 star property
Waukon
8.0 out of 10, Very Good, (450)
This inviting hotel offers a complimentary continental breakfast and convenient amenities including free parking and Wi-Fi. Guests consistently praise the helpful staff and clean accommodations, making for a comfortable business or leisure trip to Waukon.
"Great clean place to stay!"
United States
randy
The price is ￥10,760
￥12,051 total
includes taxes & fees
Dec 27 - Dec 28
Boarders Inn & Suites by Cobblestone Hotels – Waukon
Standard Room, 2 Queen Beds, Non Smoking | Desk, free WiFi
Northwood Inn Prairie Du Chien

Northwood Inn Prairie Du Chien

Northwood Inn Prairie Du Chien
2.0 star property
Southside
8.2 out of 10, Very Good, (104)
Discover Prairie Du Chien from this welcoming hotel offering complimentary continental breakfast, WiFi, and parking. Located near Riverside Square and O'Brien Park, this convenient base lets you explore local attractions with ease.
"Very nice hotel and very clean "
United States
Susan
The price is ￥9,045
￥10,085 total
includes taxes & fees
Dec 28 - Dec 29
Northwood Inn Prairie Du Chien
Front of property
AmericInn by Wyndham Prairie du Chien

AmericInn by Wyndham Prairie du Chien

AmericInn by Wyndham Prairie du Chien
2.0 star property
Prairie Du Chien
8.0 out of 10, Very Good, (575)
Start your day with a complimentary breakfast before exploring nearby Riverside Square and O'Brien Park. After sightseeing, unwind in the relaxing hot tub or take a refreshing dip in the indoor pool. Free WiFi and parking enhance your comfortable Wisconsin getaway.
"The room was clean, the breakfast was just what we needed, and the pool area was very nice. There wasn’t a lot of guests at the hotel, which made it nice also!"
United States
Averey
The price is ￥9,278
￥10,252 total
includes taxes & fees
Jan 1 - Jan 2, 2026
AmericInn by Wyndham Prairie du Chien
Family Room | Bathroom | Shower, towels, soap, shampoo
Prairie Voyager

Prairie Voyager

Prairie Voyager
2.5 star property
Southside
8.6 out of 10, Excellent, (125)
Located in Prairie Du Chien, this cozy motel offers a serene retreat with convenient access to the mighty Mississippi River. Enjoy complimentary self parking, WiFi, and a relaxing picnic area just minutes from O'Brien Park and Lochner Park.
"Very convenient and the owner was very nice. We use it as a safe and cost effective place to spend the night while visiting Wyalusing. "
United States
Patricia
The price is ￥10,136
￥11,302 total
includes taxes & fees
Dec 28 - Dec 29
Prairie Voyager
Deluxe Room, 1 King Bed | Desk, laptop workspace, iron/ironing board, free WiFi
Windsor Place Inn

Windsor Place Inn

Windsor Place Inn
2.0 star property
Southside
8.4 out of 10, Very Good, (1000)
Enjoy the indoor pool at this welcoming hotel near hiking trails and Riverside Square. Free WiFi, parking, and breakfast add value. Guests rave about the helpful staff and convenient access to O'Brien Park.
"Nice place would stay here again "
United States
David
The price is ￥8,405
￥9,289 total
includes taxes & fees
Jan 1 - Jan 2, 2026
Windsor Place Inn
View from room
Waterfront Hotel

Waterfront Hotel

Waterfront Hotel
3.0 star property
Prairie Du Chien
9.2 out of 10, Wonderful, (874)
Immerse yourself in the scenic beauty of Prairie Du Chien at this riverside retreat. Enjoy complimentary breakfast, WiFi, and parking while staying near Native Prairie Meadow. The 24-hour fitness center and on-site restaurant complete your memorable stay.
"Amazing stay! "
United States
Ashley
The price is ￥18,105
￥20,188 total
includes taxes & fees
Jan 4 - Jan 5, 2026
Waterfront Hotel
Exterior
Sportsmen Motel

Sportsmen Motel

Sportsmen Motel
2.0 star property
Dorchester
9.0 out of 10, Wonderful, (47)
Set amid the scenic Wisconsin countryside, this motel offers complimentary WiFi and free parking. Unwind in comfortable rooms with Netflix streaming. Positioned just a 48-minute drive from La Crosse Municipal Airport.
"Love this place it’s nice and quiet"
United States
Joseph
Sportsmen Motel
Business center
Quality Inn & Suites Prairie Du Chien

Quality Inn & Suites Prairie Du Chien

Quality Inn & Suites Prairie Du Chien
2.5 star property
Southside
8.2 out of 10, Very Good, (415)
Discover tranquility at this Prairie Du Chien hotel where you can unwind in the hot tub after exploring nearby O'Brien Park. The indoor pool, fitness center, and garden create a rejuvenating atmosphere with convenient in-room microwaves and refrigerators.
"We were happy with everything: spacious room, nice bed and pillows, good breakfast, etc."
United States
Shirley
The price is ￥8,701
￥9,615 total
includes taxes & fees
Jan 1 - Jan 2, 2026
Quality Inn & Suites Prairie Du Chien
Exterior
Microtel Inn & Suites by Wyndham Prairie du Chien

Microtel Inn & Suites by Wyndham Prairie du Chien

Microtel Inn & Suites by Wyndham Prairie du Chien
2.5 star property
Southside
8.2 out of 10, Very Good, (579)
"Good location, clean, friendly staff. "
United States
Carol
The price is ￥10,429
￥11,628 total
includes taxes & fees
Dec 28 - Dec 29
Microtel Inn & Suites by Wyndham Prairie du Chien
Indoor pool
Country Inn & Suites by Radisson, Prairie du Chien

Country Inn & Suites by Radisson, Prairie du Chien

Country Inn & Suites by Radisson, Prairie du Chien
3.0 star property
Prairie Du Chien
8.4 out of 10, Very Good, (974)
Escape to this family-friendly hotel near Limery Ridge Savanna, featuring indoor adult and children's pools plus a relaxing hot tub. Enjoy free breakfast, WiFi, and parking, then unwind at the on-site restaurant and bar after a fitness center workout.
"Very friendly staff Great breakfast "
United States
Tracy
The price is ￥11,928
￥13,300 total
includes taxes & fees
Jan 26 - Jan 27, 2026
Country Inn & Suites by Radisson, Prairie du Chien
Comfort Cabin | Private kitchen
Scenic Valley Motel

Scenic Valley Motel

Scenic Valley Motel
2.0 star property
Lansing
8.2 out of 10, Very Good, (114)
Located 5 minutes from the Mississippi River, this welcoming motel offers free WiFi and parking. Explore nearby Mount Hosmer Park and Lansing City Library while enjoying convenient housekeeping during your tranquil Iowa getaway.
"Great staff and easy in/out. "
United States
samuel
The price is ￥9,821
￥14,122 total
includes taxes & fees
Dec 31 - Jan 1, 2026
Scenic Valley Motel
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
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Stay near popular Harpers Ferry attractions

Yellow River State Forest

4.5/5 (48 reviews)
Nestled in Iowa's Driftless Area, Yellow River State Forest offers 25 miles of trails through dramatic ridges and dense woodlands. Enjoy primitive camping and trout fishing in this serene 8,500-acre wilderness retreat.
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Waukon Junction Wildlife Area

You can take time to visit Waukon Junction Wildlife Area during your travels to Harpers Ferry. While you're in the area, wander around the parks.
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Learn more about Harpers Ferry

Nestled along the Mississippi River, this charming town invites visitors to paddle through Butters Lake or spot wildlife at Waukon Junction Wildlife Area. Hike among ancient Native American burial mounds at Effigy Mounds National Monument or explore the forested trails of Yellow River State Forest.

See all hotels in Harpers Ferry
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Top Harpers Ferry Hotel Reviews

Northwood Inn Prairie Du Chien

Northwood Inn Prairie Du Chien

10/10 Excellent
"This is a great hotel. Clean rooms, easy check in, and a great little breakfast. We have stayed here multiple times and it's our go to when we're here! "
Bruce 1-night trip
Posted 12 days ago
Northwood Inn Prairie Du Chien

More cheap stays in Harpers Ferry

Windsor Place Inn

Windsor Place Inn

1936 Marquette Road South Prairie Du Chien WI
The price is ￥8,405 per night from Jan 1 to Jan 2
￥8,405
￥9,289 total
Jan 1 - Jan 2, 2026
includes taxes & fees
8.2/10 Very Good! (1,001 reviews)

Frequently asked questions

What's the best place for a stay in Harpers Ferry?
Located 8.6 mi (13.9 km) from the heart of Harpers Ferry, Country Inn & Suites by Radisson, Prairie du Chien is a top choice for your stay based on our traveler data. Two other options for your visit to the area are Boarders Inn & Suites by Cobblestone Hotels – Waukon and Waterfront Hotel. See all available top hotels, or vacation rentals in Harpers Ferry.
What are some of the best vacation rentals that Harpers Ferry has to offer?
Cabin in the Bluff, Only Minutes from the Mississippi River!: This Harpers Ferry vacation home rental is located on a river and has a patio, a garden, and a barbecue grill to put you at ease in your new surroundings. Kitchen amenities include a fridge, a stovetop, and a microwave. You and your friends and family can relax into your vacation with amenities like a selection of games. See all vacation rentals in Harpers Ferry.
If I need to cancel my hotel reservation in Harpers Ferry, will I receive a refund?
Yes, the majority of hotel reservations are fully refundable if cancelled prior to the hotel's cancellation deadline, which is usually within 24-48 hours of your scheduled arrival. If you have a non-refundable reservation, it might still be possible to cancel it and get a refund within 24 hours of your booking. Filter your search by fully refundable to find flexible hotel deals in Harpers Ferry.
Where can I learn more about changing or cancelling my trip to Harpers Ferry?
To find more details about updating your trip to Harpers Ferry or cancelling it, go to https://www.expedia.com/service/.
What's the best hotel to stay close to Effigy Mounds National Monument?
Country Inn & Suites by Radisson, Prairie du Chien, WI is one of the top choices for your stay based on our traveler data, and this 3-star hotel offers free breakfast and a restaurant. It's located 2.7 mi (4.3 km) from Effigy Mounds National Monument. Other good options within a few miles include Waterfront Hotel and Cobblestone Inn & Suites - Marquette/Prairie du Chien.
What about the best place to stay close to Yellow River State Forest?
One of the top choices for your stay is Country Inn & Suites by Radisson, Prairie du Chien, WI, located 8.6 mi (13.9 km) from Yellow River State Forest, and this 3-star hotel offers free breakfast and a restaurant. Waterfront Hotel and Cobblestone Inn & Suites - Marquette/Prairie du Chien are a couple of other good options within the surrounding area.
What are some accommodations with pools in Harpers Ferry?
Country Inn & Suites by Radisson, Prairie du Chien: Provides a children's pool, an indoor pool, and daily. Wexford Hollow... 6 Bedroom Cabin W/Pool & Hot Tub and Longview Lodge 6 Bedrooms with Hot Tub & Swimming Pond, firepit, & pool table are a couple of other choices that offer an onsite pool. View all hotels with pools in Harpers Ferry.
What's the best accommodation near La Crosse Municipal Airport (LSE)?
Country Inn & Suites by Radisson, La Crosse, WI is a popular hotel, featuring free breakfast and an indoor pool. It's located a short 1.7 mi (2.8 km) from La Crosse Municipal Airport. Other options near the airport are AmericInn by Wyndham La Crosse Riverfront-Conference Center and Motel 6 La Crosse, WI.
What is staying in Harpers Ferry like?
Visitors can enjoy all that Harpers Ferry has to offer including the restaurants and parks. In Harpers Ferry, there are 24 hotels and other accommodations to choose from. Find out more about Harpers Ferry.
What is there to see in Harpers Ferry?
Natural beauty is on display at Harpers Ferry City Park, Yellow River State Forest, and Mississippi River. A couple of additional sights to add to your agenda are Harpers Ferry City Library and Effigy Mounds National Monument. Check out what more to see and do in Expedia's Harpers Ferry guide.
What's the weather like in Harpers Ferry?
The hottest months are usually July and August with an average temp of 69°F, while the coldest months are January and February with an average of 25°F. The snowiest months in Harpers Ferry are January, March, April, and December, with each month seeing an average of 7 inches of snowfall.