The Best Hotels with Early Check-in in Hakodate from ￥5,860 in 2026

A coastal cityscape with snow-covered buildings and a prominent bridge.

Change your mind
Book hotels with free cancellation
Treat yourself
Sign in to save 10% or more on thousands of hotels
Sign in
Be picky
Search almost a million properties worldwide

Check availability on Hakodate Hotels with Early Check-in

Tonight

Tomorrow

This weekend

Next weekend

Our top choices for Hakodate hotels with express check-in

Deluxe 4-Bed Bunk Room, Non Smoking | In-room safe, laptop workspace, WiFi (free), bed sheets

Sky View Triple Room, Non Smoking | In-room safe, laptop workspace, WiFi (free), bed sheets

Sky View Triple Room, Non Smoking | View from room

1. HOTEL MYSTAYS Hakodate Station

Hakodate

Hiu Tung

￥5,327

￥5,860 total

Oct 18 - Oct 19

Room, 2 Twin Beds, Non Smoking | Desk, laptop workspace, blackout drapes, soundproofing

2. Comfort Hotel Hakodate

Hakodate

Edmund

￥7,636

￥8,400 total

Sep 23 - Sep 24

Design Condo, Pets Allowed | 1 bedroom, hypo-allergenic bedding available, minibar (some free items)

Design Condo, Pets Allowed | Living area | Fireplace

Design Condo, Pets Allowed | Private kitchen | Electric kettle

3. Portside Inn Hakodate

Hakodate

"Aesthetically absolutely beautifully designed interior, however not so functional. We stayed over the new year so it was cold/dry weather so we wish they had humidifiers. The beds are extremely comfortable unlike the beds at the major hotels so we were able to get rest well to recover from 13 hours flight. Unfortunately unlike other guests, we didn't get response from the owner quickly. We got a response 3 days after we checked out which was not a big deal anyway. "

Nozomi

￥12,109

￥13,320 total

Oct 14 - Oct 15

4. OMO5 Hakodate by Hoshino Resorts

Hakodate

Sam Yi-Shang

￥21,850

￥24,350 total

Sep 30 - Oct 1

Twin Room | WiFi (free), individually decorated, bed sheets

Classic Twin Room | Private kitchen | Fridge, microwave, oven, stovetop

WiFi (free), individually decorated, bed sheets

5. コンドミニアムビューマウント函館

Bay Area

￥11,592

￥12,751 total

Oct 1 - Oct 2

Comfort House, Sea View | View from room

Comfort House, Sea View | Living area | 65-inch flat-screen TV with digital channels, Netflix, Hulu

Comfort House, Sea View | WiFi (free), bed sheets

6. Aoyagi Stay

Hakodate

"We had a really lovely time here, and it was a perfect retreat after the busy atmosphere of Tokyo! The atmosphere of Hakodate is reminiscent of places like the Oregon Coast and Fairbanks, Alaska, that is, a slow-paced town in a cool climate with wonderful museums and historical sites related to indigenous community (in this case, the Ainu and other neighboring cultures) and a strong connection to the sea. The star-shaped Goryokuko was a unique stop we could have explored further. And I should...

Cassandra

￥20,529

￥32,127 total

Oct 13 - Oct 14