A lakeside lodge with a wooden pier, surrounded by lush greenery and a forested backdrop.

Find Cheap Hotels in San Juan Island, WA

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Check availability on San Juan Island Cheap Hotels

Tonight
Sep 16 - Sep 17
Tomorrow
Sep 17 - Sep 18
This weekend
Sep 18 - Sep 20
Next weekend
Sep 25 - Sep 27

Our top choices for San Juan Island cheap hotels

A motel with a row of rooms, a parking lot, and blooming flowers in the foreground.
A bathroom with a shower, a towel rack, and a shelf with a towel.
A room with two beds, wooden walls, and a window.
A wooden chair and a wooden dresser in a room with a wooden panel wall.

1. The Orca Inn

The Orca Inn
Friday Harbor
United States
Andrew
￥15,077
￥16,683 total
includes taxes & fees
Oct 1 - Oct 2
The Orca Inn
A modern interior with sofas, a table, and hanging plants.
A covered outdoor swimming pool area with a hot tub, benches, and emergency exit signs.
A modern lobby with a reception desk, seating area, and a large window with a view of the sea.
A living room with a stone fireplace, a large window, a dark gray sofa, and a wooden coffee table.

2. Friday Harbor Suites

Friday Harbor Suites
Friday Harbor
United States
Jennifer
￥26,889
￥29,751 total
includes taxes & fees
Oct 13 - Oct 14
Friday Harbor Suites
A building with a covered outdoor area, red doors, and hanging flower baskets.
A hotel room with two beds, a nightstand with a lamp, a vase with flowers, and a window with curtains.
A pool area with a wooden deck, surrounded by trees with pinkish leaves.
A hotel room with a grey armchair, a small round table, a bedside table, a lamp, and a potted plant.

3. Discovery Inn

Discovery Inn
Friday Harbor
United States
Victoria
￥25,332
￥28,030 total
includes taxes & fees
Oct 17 - Oct 18
Discovery Inn
A marina with boats, a cruise ship, and a forested island.
A living room with a sectional sofa, a coffee table, a lamp, and a potted plant.
A kitchen with wooden cabinets, a built-in microwave, and a coffee station.
A white building with a balcony, potted plants, and a stone pathway.

4. Bird Rock Hotel

Bird Rock Hotel
Friday Harbor
United States
Vanessa
￥24,821
￥27,464 total
includes taxes & fees
Oct 1 - Oct 2
Bird Rock Hotel
A living room with a sofa, armchairs, a coffee table, and a fireplace.
A hotel lobby with a reception desk, seating area, and a view of the adjacent room.
A building with a sign that reads "OFFICE Gift Shop" at the entrance.
A landscaped garden with neatly trimmed hedges, a white picket fence, and a wooden signboard.

5. Earthbox Inn & Spa

Earthbox Inn & Spa
Friday Harbor
United States
Nicole
￥35,680
￥39,481 total
includes taxes & fees
Oct 1 - Oct 2
Earthbox Inn & Spa
A serene outdoor seating area with a table and chairs, surrounded by lush greenery and a tree.
A spacious entryway with a wooden staircase, a patterned rug, and potted plants.
A two-story building with a red door, surrounded by a garden with various plants and flowers.
A grassy area with a pond, trees, and a red chair.

6. Trumpeter Inn

Trumpeter Inn
Friday Harbor
United States
James
￥35,672
￥39,364 total
includes taxes & fees
Oct 1 - Oct 2
Trumpeter Inn
A two-story house with a front porch, a picket fence, and a small garden area.
A cozy room with a wooden ceiling, a bed with a quilt, a sofa with cushions, a table with a board game, and a window with shutters.
A garden with a wooden pergola, flowering plants, and a pathway leading to a house.
A conservatory with a dining table set for four, surrounded by white chairs, and a lamp on the right.

7. Tucker House Inn

Tucker House Inn
Friday Harbor
United States
ZACHARY
￥24,413
￥27,013 total
includes taxes & fees
Oct 12 - Oct 13
Tucker House Inn
A marina with boats docked in a structured layout, surrounded by water and a distant cityscape.
A hotel with a large building, a pond in front, and trees around.
A waterfront hotel with multiple docked boats, a pier, and a view of the surrounding forested area.
A restaurant with tables set for dining, large windows offering a view of boats and greenery.

8. Roche Harbor Resort

Roche Harbor Resort
Friday Harbor
United States
Nicco
￥33,229
￥38,501 total
includes taxes & fees
Oct 12 - Oct 13
Roche Harbor Resort
A wooden cabin interior with a dining table, chairs, and a bench.
A lodge with multiple cabins, a dock, and a surrounding forest.
A cozy cabin interior with a large window overlooking a lake, a fireplace, and a comfortable seating area.
A marina with boats docked, surrounded by forested hills and a small building complex.

9. Snug Harbor Resort

Snug Harbor Resort
Friday Harbor
United States
Patricia
￥38,914
￥42,943 total
includes taxes & fees
Oct 18 - Oct 19
Snug Harbor Resort
A room with a sloped ceiling and large windows offering a view of a rural landscape.
A table with various food items, including a dish with green beans, eggs, and a bowl of sauce.
An outdoor event with people seated at tables under string lights and paper lanterns.
A farm with rows of crops under a partly cloudy sky.

10. Saturn's Return

Saturn's Return
Friday Harbor
United States
Margaret
￥49,081
￥54,160 total
includes taxes & fees
Oct 6 - Oct 7
Saturn's Return
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Top San Juan Island Hotel Reviews

Anacortes Inn

Anacortes Inn

8/10 Good
"So I would give it 5 stars if not for the limited staffing of the front desk, nobody there from late ngt till 8am, hopefully u don’t have a problem overnight👎 And the fact they use Pluto TV for streaming which requires u as a guest to sign up w Pluto TV to be able to watch anything. They have zero local tv or news, only streaming."
Daniel 3-night trip
Posted less than an hour ago
Anacortes Inn

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