Find hotels in Port Jefferson Station, NY from ¥15,942

Start date: Check-in selected.
To Date
End date: Check-out
  • Change your mind

    Book hotels with free cancellation
  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
  • Be picky

    Search almost a million properties worldwide

Check prices for these dates

This weekend
Next weekend

Filter by

Guest rating
Guest rating
Star rating

Our top choices for Port Jefferson Station hotels

Hampton Inn Long Island-Brookhaven

Hampton Inn Long Island-Brookhaven
2.5 star property
Farmingville
8.8 out of 10, Excellent, (1253)
Discover this comfortable hotel with an indoor pool and fitness center, just a 15-minute drive from Stony Brook University. Travelers praise the helpful staff, complimentary breakfast, and proximity to Long Island Community Hospital Amphitheater.

"Great service and rooms was clean. "
United States
Ioloa
The price is ¥16,514
¥18,866 total
includes taxes & fees
Jan 4 - Jan 5, 2026
Hampton Inn Long Island-Brookhaven

The Surfside Hotel

The Surfside Hotel
2.0 star property
Lordship
9.4 out of 10, Exceptional, (172)
Steps from Long Beach and Lordship Beach, this Stratford hotel offers indulgent deep-tissue massages, aromatherapy, and Ayurvedic treatments. Enjoy meals at Little Pub, free WiFi, and convenient parking just 3 minutes from Sikorsky Memorial Airport.

"Great place to stay"
United States
Craig
The price is ¥18,427
¥21,191 total
includes taxes & fees
Jan 8 - Jan 9, 2026
The Surfside Hotel

Holiday Inn Express Hotel & Suites Long Island-East End by IHG

Holiday Inn Express Hotel & Suites Long Island-East End by IHG
2.5 star property
Riverhead
8.6 out of 10, Excellent, (1001)
This Riverhead hotel offers comfortable accommodations with free breakfast, WiFi, and parking. Swim in the seasonal outdoor pool or exercise in the 24-hour fitness center. Located near Out East Family Fun and Riverhead Raceway with convenient access to Riverhead Station.

"Nice room. Good breakfast. Nice lobby and breakfast area. "
United States
Richard
The price is ¥16,788
¥19,180 total
includes taxes & fees
Jan 23 - Jan 24, 2026
Holiday Inn Express Hotel & Suites Long Island-East End by IHG

Hyatt Place Long Island East End

Hyatt Place Long Island East End
3.0 star property
Riverhead
9.2 out of 10, Wonderful, (1003)
Located in Riverhead, this hotel offers a marina, indoor and outdoor pools, plus 2 bars/lounges. Stay active in the 24-hour fitness center while enjoying in-room conveniences like sofa beds and refrigerators. Just a 14-minute walk from the train station.

"Our room had a great view of the river and marina. we also loved the seating area in the room. Very comfortable"
United States
Helen
The price is ¥17,259
¥19,720 total
includes taxes & fees
Jan 19 - Jan 20, 2026
Hyatt Place Long Island East End

Holiday Inn Long Island-Islip Arpt East by IHG

Holiday Inn Long Island-Islip Arpt East by IHG
3.0 star property
Holtsville
9.2 out of 10, Wonderful, (857)
"Great Hotel"
United States
Ronald
The price is ¥15,847
¥18,106 total
includes taxes & fees
Jan 15 - Jan 16, 2026
Holiday Inn Long Island-Islip Arpt East by IHG

Hilton Garden Inn Stony Brook

Hilton Garden Inn Stony Brook
3.0 star property
Stony Brook
9.0 out of 10, Wonderful, (1003)
"Great visit"
United States
steven
The price is ¥18,847
¥21,532 total
includes taxes & fees
Jan 19 - Jan 20, 2026
Hilton Garden Inn Stony Brook

The Inn And Spa At East Wind

The Inn And Spa At East Wind
3.5 star property
Calverton
8.8 out of 10, Excellent, (880)
Escape to this quiet sanctuary offering deep-tissue massages, aromatherapy, and hydrotherapy treatments. Enjoy the indoor pool and bar after exploring nearby Great Rock Golf Club. Free WiFi and parking enhance your peaceful countryside getaway.

"It a beautiful facility, great guest services "
United States
Terry
The price is ¥16,992
¥19,412 total
includes taxes & fees
Jan 7 - Jan 8, 2026
The Inn And Spa At East Wind

Hotel Indigo East End by IHG

Hotel Indigo East End by IHG
3.5 star property
Riverhead
8.8 out of 10, Excellent, (1000)
Discover American cuisine at Bistro 72 while staying minutes from Tanger Outlet Center in Riverhead. Enjoy complimentary bike rentals, free WiFi and parking, plus a welcoming bar and deli at this well-maintained hotel with attentive staff.

"The places lovely good restaurant. Nice dinner excellent complimentary breakfast."
United States
Caroline
The price is ¥16,631
¥19,001 total
includes taxes & fees
Jan 21 - Jan 22, 2026
Hotel Indigo East End by IHG

Quality Suites Stratford

Quality Suites Stratford
2.5 star property
Stratford
8.0 out of 10, Very Good, (1001)
Play a round of golf or hit the volleyball court at this Stratford hotel. Just 15 minutes from Fairfield University, guests love the free breakfast, ample parking, and helpful staff. Perry House and other local attractions await nearby.

"Close to the water and great dining options. "
United States
Tessa
The price is ¥14,763
¥16,978 total
includes taxes & fees
Jan 11 - Jan 12, 2026
Quality Suites Stratford

Hyatt Regency Long Island

Hyatt Regency Long Island
4.0 star property
Hauppauge
8.2 out of 10, Very Good, (1102)
Discover tranquil luxury at this Hauppauge hotel featuring a golf course, seasonal outdoor pool, and 2 tennis courts. After a workout in the 24-hour fitness center, enjoy the restaurant or unwind at the bar. Near Lakeland County Park with free WiFi and parking.

"Great place! "
United States
Carla Maeling
The price is ¥21,076
¥24,080 total
includes taxes & fees
Dec 30 - Dec 31
Hyatt Regency Long Island

Hampton Inn Long Island/Islandia

Hampton Inn Long Island/Islandia
2.5 star property
Islandia
8.6 out of 10, Excellent, (1064)
Escape to a serene hotel just minutes from Stony Brook University. This quiet getaway offers an indoor pool, fitness center, and complimentary breakfast. Nearby highways connect you to Connetquot River, local shopping, and dining options.

"The room was clean, the bed was comfortable, and the desk staff friendly and professional. "
United States
Denise
The price is ¥13,954
¥15,942 total
includes taxes & fees
Jan 4 - Jan 5, 2026
Hampton Inn Long Island/Islandia

Fairfield Inn by Marriott Medford Long Island

Fairfield Inn by Marriott Medford Long Island
2.5 star property
Medford
8.8 out of 10, Excellent, (1000)
Stay minutes from MacArthur Airport at this comfortable hotel with an indoor pool and 24-hour fitness center. Enjoy free breakfast, WiFi, and parking, plus convenient in-room refrigerators and microwaves. A short walk to Medford Station connects you to local attractions.

"always an excellent stay "
United States
tanya
The price is ¥19,515
¥22,296 total
includes taxes & fees
Jan 12 - Jan 13, 2026
Fairfield Inn by Marriott Medford Long Island

Holiday Inn Express Hauppauge-Long Island

Holiday Inn Express Hauppauge-Long Island
2.5 star property
Hauppauge
8.2 out of 10, Very Good, (1270)
Wake up to a complimentary breakfast at this Hauppauge hotel before exploring nearby attractions. Take a refreshing dip in the indoor pool, work out in the 24-hour fitness center, or connect with free WiFi. MacArthur Airport is just 16 minutes away.

"Room was clean staff very nice and breakfast was great"
United States
Adrianne
The price is ¥18,031
¥20,600 total
includes taxes & fees
Jan 5 - Jan 6, 2026
Holiday Inn Express Hauppauge-Long Island

Home2 Suites by Hilton Long Island Brookhaven

Home2 Suites by Hilton Long Island Brookhaven
3.0 star property
Yaphank
9.2 out of 10, Wonderful, (1007)
Located by the ocean in Yaphank, this hotel offers an indoor pool and health club for active travelers. Enjoy free breakfast and parking while exploring Carmans River and Lasorda Legacy Park. Guests consistently praise the courteous staff and convenient amenities.

"It was amazing I would stay there al day every day!"
United States
Desroy
The price is ¥19,075
¥21,792 total
includes taxes & fees
Jan 1 - Jan 2, 2026
Home2 Suites by Hilton Long Island Brookhaven

La Quinta Inn & Suites by Wyndham Islip - MacArthur Airport

La Quinta Inn & Suites by Wyndham Islip - MacArthur Airport
3.0 star property
Bohemia
6.8 out of 10, (1455)
"Easy check in staff was friendly "
United States
David
The price is ¥14,152
¥16,168 total
includes taxes & fees
Jan 11 - Jan 12, 2026
La Quinta Inn & Suites by Wyndham Islip - MacArthur Airport

Hilton Garden Inn Islip/MacArthur Airport

Hilton Garden Inn Islip/MacArthur Airport
3.0 star property
Ronkonkoma
8.4 out of 10, Very Good, (1002)
Located near MacArthur Airport and a train station, this hotel offers fitness facilities and dining options. Clean rooms provide a relaxing retreat after exploring local museums and parks. The helpful staff ensures a pleasant stay for business travelers.

"Great place!"
United States
Daniel
The price is ¥15,539
¥17,755 total
includes taxes & fees
Jan 1 - Jan 2, 2026
Hilton Garden Inn Islip/MacArthur Airport

The Circle Hotel Fairfield

The Circle Hotel Fairfield
3.0 star property
Grasmere
9.0 out of 10, Wonderful, (1415)
Just 5 minutes from Fairfield University, this hotel offers complimentary breakfast, WiFi and parking. The seasonal outdoor pool receives excellent reviews, and South Benson Marina is nearby. Comfortable beds and a restaurant enhance the experience.

"Nice hotel in Fairfield, Ct"
United States
Veronica
The Circle Hotel Fairfield

Residence Inn by Marriott New York Long Island East End

Residence Inn by Marriott New York Long Island East End
3.0 star property
Riverhead
9.0 out of 10, Wonderful, (1000)
Unwind at this Riverhead hotel featuring seasonal outdoor and year-round indoor pools, just minutes from Tanger Outlet Center. Free breakfast, WiFi, and parking enhance your stay while the 24-hour fitness center keeps your routine on track.

"Amazing property with California king bed !!!!! "
United States
Nicholas
The price is ¥19,075
¥21,793 total
includes taxes & fees
Dec 30 - Dec 31
Residence Inn by Marriott New York Long Island East End

SpringHill Suites by Marriott Long Island Brookhaven

SpringHill Suites by Marriott Long Island Brookhaven
3.0 star property
North Bellport
8.4 out of 10, Very Good, (1007)
Located in Yaphank, this hotel offers convenient perks including daily buffet breakfast and self parking. Guests can stay active at the 24-hour fitness center or grab a bite at the snack bar. Spacious rooms feature sofa beds and microwaves, while nearby attractions like Lasorda Legacy Park are just a short drive away.

"Great staff, and the room was spacious! Loved my stay "
United States
Yessica Arely
The price is ¥18,422
¥21,047 total
includes taxes & fees
Jan 1 - Jan 2, 2026
SpringHill Suites by Marriott Long Island Brookhaven

Chalet Inn & Suites Centerport

Chalet Inn & Suites Centerport
2.0 star property
Centerport
7.8 out of 10, Good, (763)
Discover this Centerport gem with a seasonal outdoor pool and garden terrace. Located near the train station with easy access to Huntington and Centerport beaches. Enjoy complimentary breakfast, WiFi, and parking while friendly staff ensure a pleasant stay.

"A quaint hotel right in the center of things. Loved it!! "
United States
RICHARD
Chalet Inn & Suites Centerport
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
Save an average of 15% on thousands of hotels when you're signed in

Learn more about Port Jefferson Station

This Long Island community offers easy access to Port Jefferson's charming harbor with its waterfront dining and boutique shopping. Locals recommend visiting Avalon Park and Preserve in nearby Stony Brook for peaceful nature trails and impressive sculpture gardens.

Port Jefferson, NY, at dusk

Top Port Jefferson Station Hotel Reviews

More cheap stays in Port Jefferson Station

Frequently asked questions

What's the best place to stay in Port Jefferson Station?
Located 10.5 mi (16.9 km) from the heart of Port Jefferson Station, Hyatt Regency Long Island is a top choice for your stay based on our traveler data. Other good options for your stay in the area are Holiday Inn Express Hauppauge-Long Island and La Quinta Inn & Suites by Wyndham Islip - MacArthur Airport. See all available top hotels, or vacation rentals in Port Jefferson Station.
What are some of the best vacation home rentals in Port Jefferson Station?
4-bedroom beach house minutes from Hamptons: Visitors like this Port Jefferson Station vacation home rental. It offers a fireplace, a balcony, and a barbecue grill to help you feel perfectly comfortable in your new surroundings. It has 4 bedrooms as well as a kitchen with a dishwasher, a fridge, and a stovetop, so you can cook with friends or family. Make the most of the garden in this rental home to help you unwind. See all vacation rentals in Port Jefferson Station.
If I need to cancel my hotel reservation in Port Jefferson Station, will I receive a refund?
Yes! The majority of hotel room reservations are fully refundable if cancelled before the accommodation's cancellation deadline, which in most cases is within 24 or 48 hours of your arrival date. If you have a reservation that's non-refundable, you might be able to still cancel and get a refund within 24 hours of your booking. Filter your search by fully refundable to find flexible hotel deals in Port Jefferson Station.
Where can I learn more about changing or cancelling my trip to Port Jefferson Station?
For more information about picking new dates or cancelling your trip to Port Jefferson Station, click here.
What are some accommodations with pools in Port Jefferson Station?
Hyatt Regency Long Island: Features a seasonal outdoor pool, an indoor pool, and 2 outdoor tennis courts. Holiday Inn Express Hauppauge-Long Island and Radisson Hotel Hauppauge-Long Island are two additional hotels that feature an onsite pool. View all hotels with pools in Port Jefferson Station.
What's the best place to stay near John F. Kennedy International Airport (JFK)?
Holiday Inn Express Kennedy Airport is a popular hotel, featuring free breakfast and free WiFi. It's located a short 1.5 mi (2.5 km) from John F. Kennedy Intl. Airport. Other options near the airport are Fairfield Inn by Marriott JFK Airport and Radisson Hotel JFK Airport.
What is staying in Port Jefferson Station like?
Visitors to Port Jefferson Station are sure to enjoy the waterfront. Tourists can also enjoy the city's shopping, restaurants, and university setting. In Port Jefferson Station, there are 6 hotels and other accommodations to choose from. Find out more about Port Jefferson Station.
What should I see while I'm in Port Jefferson Station?
Places to visit in the wider area include Port Jefferson, Long Island Museum of American Art, History, and Carriages, and Avalon Park and Preserve. You'll also find Smithaven Mall and Lake Ronkonkoma in the area. Check out what more to see and do in Expedia's Port Jefferson Station guide.
How can I get around Port Jefferson Station?
To see more of the larger area, hop aboard a train at Port Jefferson Station. If you want to venture out around the area, you may want a rental car in Port Jefferson Station for your journey.
What's the seasonal weather like in Port Jefferson Station?
The hottest months are usually July and August with an average temp of 72°F, while the coldest months are January and February with an average of 37°F. Average annual precipitation for Port Jefferson Station is 55 inches.

Explore a world of travel with Expedia