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Check prices for these dates

Next weekend
Jun 5 - Jun 7
In two weeks
Jun 12 - Jun 14

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Our top choices for Clayton hotels

Standard Room, 1 King Bed | Premium bedding, free WiFi, bed sheets

Chateau Country Inn

Chateau Country Inn
2.0 star property
Clayton
9.6 out of 10, Exceptional, (149 reviews)
"Clean room and great area"
United States
Astrid
The price is ￥19,867
￥22,051 total
includes taxes & fees
Jun 1 - Jun 2
Chateau Country Inn
Exterior

1000 Islands Harbor Hotel

1000 Islands Harbor Hotel
3.5 star property
Clayton
9.2 out of 10, Wonderful, (1,000 reviews)
"We really loved this hotel. In previous visits to Clayton, I always saw this beautiful hotel and wanted to finally stay the night there. It exceeded our expectations. The resort was very elegant and well maintained. The patio is gorgeous and the pool/ hot tub were comfortable temperatures. This is the place to stay when visiting Clayton."
United States
Ryan
The price is ￥36,417
￥40,424 total
includes taxes & fees
Jun 25 - Jun 26
1000 Islands Harbor Hotel
2-BR Riverfront (Top Floor) | Individually decorated, individually furnished, desk, free WiFi

West Winds Motel & Cottages

West Winds Motel & Cottages
2.5 star property
Clayton
9.2 out of 10, Wonderful, (164 reviews)
"Easy check in Beautiful location right on the River. "
Canada
Nancy
The price is ￥17,199
￥19,091 total
includes taxes & fees
Jun 2 - Jun 3
West Winds Motel & Cottages
Queen Room | Blackout drapes, rollaway beds, free WiFi, bed sheets

The Clipper Inn

The Clipper Inn
3.0 star property
Clayton
8.4 out of 10, Very Good, (285 reviews)
"Room was clean and the beds were comfortable"
United States
Jason
The price is ￥17,358
￥19,267 total
includes taxes & fees
Jun 15 - Jun 16
The Clipper Inn
Studio Suite, 1 King Bed, Non Smoking | Desk, iron/ironing board, free WiFi, bed sheets

Days Inn by Wyndham Watertown Fort Drum

Days Inn by Wyndham Watertown Fort Drum
2.0 star property
Calcium
8.8 out of 10, Excellent, (1,001 reviews)
"Great hotel honestly one of our favorites"
United States
Chris
The price is ￥11,945
￥13,260 total
includes taxes & fees
May 31 - Jun 1
Days Inn by Wyndham Watertown Fort Drum
Reception

Hampton Inn Watertown

Hampton Inn Watertown
2.5 star property
Watertown
9.0 out of 10, Wonderful, (1,001 reviews)
"Staff was friendly, breakfast was great, everything was clean. Will definitely stay there again when we stay in Watertown to travel up north."
United States
Sarah
The price is ￥18,818
￥20,889 total
includes taxes & fees
Jun 14 - Jun 15
Hampton Inn Watertown
Exterior

Ramada by Wyndham Watertown/Thousand Islands NY

Ramada by Wyndham Watertown/Thousand Islands NY
2.5 star property
Watertown
8.0 out of 10, Very Good, (1,030 reviews)
"Excellent location. , very clean, super friendly and helpful staff."
Canada
Trina
The price is ￥10,750
￥11,934 total
includes taxes & fees
Jun 11 - Jun 12
Ramada by Wyndham Watertown/Thousand Islands NY
View from room

Capt. Thomson's Resort

Capt. Thomson's Resort
3.0 star property
Alexandria Bay Downtown
9.4 out of 10, Exceptional, (1,005 reviews)
"Great place to stay"
United States
Harry
Capt. Thomson's Resort
Lobby

Quality Inn & Suites Watertown Fort Drum

Quality Inn & Suites Watertown Fort Drum
2.5 star property
Calcium
8.2 out of 10, Very Good, (1,003 reviews)
"Good location to visit Ft. Drum. Nice stay, only down is the very limited breakfast. Would stay there again."
United States
Sheldon
The price is ￥13,186
￥14,635 total
includes taxes & fees
Jun 14 - Jun 15
Quality Inn & Suites Watertown Fort Drum
Desk, iron/ironing board, free cribs/infant beds, free WiFi

Comfort Inn & Suites Watertown - 1000 Islands

Comfort Inn & Suites Watertown - 1000 Islands
2.5 star property
Watertown
8.4 out of 10, Very Good, (1,027 reviews)
"Always my go to hotel when visiting Watertown. Plenty of parking, clean lobby, staff are nice and welcoming. Rooms are always clean and spacious. "
Canada
Kelsey
The price is ￥18,762
￥20,827 total
includes taxes & fees
Jun 14 - Jun 15
Comfort Inn & Suites Watertown - 1000 Islands
Room, 1 Queen Bed | Premium bedding, free WiFi, bed sheets

Allen's Budget Motel

Allen's Budget Motel
2.5 star property
Watertown
8.8 out of 10, Excellent, (249 reviews)
"Stay was very comfortable and the staff was excellent "
United States
Randall
The price is ￥9,555
￥10,606 total
includes taxes & fees
Jun 1 - Jun 2
Allen's Budget Motel
Exterior

Holiday Inn Express Hotel & Suites Watertown-Thousand Island by IHG

Holiday Inn Express Hotel & Suites Watertown-Thousand Island by IHG
2.5 star property
Watertown
9.2 out of 10, Wonderful, (1,001 reviews)
"Decent breakfast clean room affordable stay."
Canada
Tigran
The price is ￥20,227
￥22,452 total
includes taxes & fees
Jun 14 - Jun 15
Holiday Inn Express Hotel & Suites Watertown-Thousand Island by IHG
Deluxe Single Room, 1 Queen Bed | Living area | TV

Nest Inn

Nest Inn
2.0 star property
Watertown
8.0 out of 10, Very Good, (77 reviews)
"nice room"
United States
joseph
The price is ￥8,087
￥9,859 total
includes taxes & fees
Jun 10 - Jun 11
Nest Inn
Exterior

Hilton Garden Inn Watertown/Thousand Islands

Hilton Garden Inn Watertown/Thousand Islands
3.0 star property
Watertown
9.2 out of 10, Wonderful, (1,000 reviews)
"Was a great jacuzzi room. Love staying there"
United States
Janet
The price is ￥21,796
￥24,193 total
includes taxes & fees
Jun 21 - Jun 22
Hilton Garden Inn Watertown/Thousand Islands
Lobby

Fairfield Inn & Suites Watertown Thousand Islands

Fairfield Inn & Suites Watertown Thousand Islands
3.0 star property
Watertown
9.2 out of 10, Wonderful, (739 reviews)
"Everything was great! Staff is extremely friendly and accommodating. "
United States
lori
The price is ￥20,589
￥22,855 total
includes taxes & fees
Jun 21 - Jun 22
Fairfield Inn & Suites Watertown Thousand Islands
Reception

Travel Inn

Travel Inn
2.0 star property
Watertown
6.8 out of 10, (19 reviews)
"Bed was comfortable. "
Canada
Karen
The price is ￥11,504
￥12,769 total
includes taxes & fees
Jun 1 - Jun 2
Travel Inn
Exterior

The GillHouse

The GillHouse
2.0 star property
Henderson Harbor
9.6 out of 10, Exceptional, (8 reviews)
"Great stay"
United States
Kerry
The price is ￥20,561
￥22,821 total
includes taxes & fees
May 31 - Jun 1
The GillHouse
Front of property - evening/night

Riveredge Resort

Riveredge Resort
3.5 star property
Alexandria Bay Downtown
8.4 out of 10, Very Good, (1,000 reviews)
"A beautiful place to visit."
United States
John
The price is ￥26,280
￥29,171 total
includes taxes & fees
Jun 7 - Jun 8
Riveredge Resort
Premium Room, 1 Queen Bed with Sofa bed | Free WiFi

Harbor House Inn

Harbor House Inn
2.5 star property
Sackets Harbor
9.2 out of 10, Wonderful, (304 reviews)
"Lovely with friendly staff. Felt very safe."
United States
Mary
The price is ￥29,629
￥34,531 total
includes taxes & fees
Jun 7 - Jun 8
Harbor House Inn
Lobby sitting area

Capt.'s Inn & Suites

Capt.'s Inn & Suites
2.0 star property
Alexandria Bay
8.8 out of 10, Excellent, (1,001 reviews)
"Very nice quiet little place to stay"
United States
Amanda
The price is ￥11,467
￥12,728 total
includes taxes & fees
Jun 7 - Jun 8
Capt.'s Inn & Suites
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
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Stay near popular Clayton attractions

Grass Point State Park

This scenic riverside park offers prime fishing spots and waterfront camping along the St. Lawrence River. Enjoy the sandy beach, marina facilities, and family-friendly atmosphere just steps from your tent.
See properties

Learn more about Clayton

Nestled along the St. Lawrence River, this charming village invites you to explore its historic downtown and scenic waterfront. Cruise the Thousand Islands, visit Boldt Castle on Heart Island, or cast a line for bass in one of Clayton's many fishing spots.

See all hotels in Clayton
Clayton, NY, USA - 02-09-2025: Winter aerial image Clayton, NY along a frozen St Lawrence River

Top Clayton Hotel Reviews

The Clipper Inn

The Clipper Inn

8/10 Good
"Room was clean and the beds were comfortable"
Jason 1-night trip
Posted 7 hours ago
The Clipper Inn

More cheap stays in Clayton

Ramada by Wyndham Watertown/Thousand Islands NY

Ramada by Wyndham Watertown/Thousand Islands NY

21000 NY State Rt 3 Watertown NY
The price is ￥10,750 per night from Jun 11 to Jun 12
￥10,750
￥11,934 total
Jun 11 - Jun 12
includes taxes & fees
8/10 Very Good! (1,030 reviews)

Frequently asked questions

Where is the best place to stay in Clayton?
1000 Islands Harbor Hotel is one of the top choices for your stay based on our traveler data. This hotel offers a restaurant and an indoor pool. Other good choices for your visit include Chateau Country Inn and The Clipper Inn. See all available top hotels, or vacation rentals in Clayton.
What are some of the best vacation rentals in Clayton?
Waterfront 5 Bedroom Grindstone Island Farmhouse: This highly rated vacation home rental in Clayton is located on a river and has a patio, a garden, and a barbecue grill to put you at ease in your new surroundings. It has 5 bedrooms as well as a kitchen with a dishwasher, a fridge, and a stovetop, so you can cook with friends or family. Make the most of the selection of games in this rental home to help you unwind. Other favorite homes for rent in Clayton are Charming Historic House 4 Blocks from Riverfront in Village of Clayton and Located in the heart of the Thousand Islands, directly across from ClaytonNY. See all vacation rentals in Clayton.
If I need to cancel my hotel reservation in Clayton, will I receive a refund?
Yes! Most hotel bookings are fully refundable provided that you cancel prior to the hotel's cancellation deadline, which often is within 24-48 hours of your arrival date. If you have a non-refundable reservation, it might still be possible to cancel it and be given a refund within 24 hours of booking. Filter your search by fully refundable to find flexible hotel deals in Clayton.
Where can I learn more about changing or cancelling my trip to Clayton?
To access more information about picking new dates or cancelling your trip to Clayton, go to https://www.expedia.com/service/.
What's the best pet-friendly place to stay in Clayton?
The Clipper Inn is a top dog-friendly inn, and offers a restaurant along with free WiFi for its human guests. West Winds Motel & Cottages is another good option if you're bringing your pet along. See more pet-friendly hotel accommodations in Clayton.
Where is the best hotel to stay near Coyote Moon Vineyards?
1000 Islands Harbor Hotel is one of the top choices for your stay based on our traveler data, and this 3.5-star hotel offers a restaurant and an indoor pool. It's located 3.1 mi (5 km) from Coyote Moon Vineyards. Another good choice is The Clipper Inn, located 2.6 mi (4.2 km) away.
What about the best place to stay close to Clayton Island Tours?
One of the top choices for your stay is 1000 Islands Harbor Hotel, located next to Clayton Island Tours, and this 3.5-star hotel offers a restaurant and an indoor pool. Wooden Boat Inn and The Clipper Inn are two other good options within 5 miles.
What's the best hotel for a golf vacation in Clayton?
The Clipper Inn is a top inn that has an adjacent golf course and features free WiFi. Another good choice is Wooden Boat Inn if you'd like to be close to a golf course while in town. You can tee off at C-Way Golf Course during your trip. See more golf hotels in Clayton.
What are some accommodations with pools in Clayton?
1000 Islands Harbor Hotel: Features free self parking, an indoor pool, and complimentary wireless internet access. Another option with an onsite pool is West Winds Motel & Cottages. View all hotels with pools in Clayton.
What's the best place to stay near Macdonald-Cartier International Airport (YOW)?
Fairfield Inn & Suites by Marriott Ottawa Airport is a popular hotel, featuring free breakfast and an indoor pool. It's located a short 0.8 mi (1.3 km) from Macdonald-Cartier Intl. Airport. Other choices close to the airport are Hilton Garden Inn Ottawa Airport and Days Inn by Wyndham Ottawa Airport.
What's it like to stay in Clayton?
Visitors to Clayton are sure to enjoy the riverfront. Tourists can also enjoy so much more including its coffeehouses. In Clayton, there are 121 hotels and other accommodations to choose from. Find out more about Clayton.
What should I do while I'm visiting Clayton?
Cultural venues include Thousand Islands Museum, Antique Boat Museum, and The Clayton Opera House. Natural beauty is on display at Lake Ontario, Grenell Island, and Blind Bay. A couple of additional sights to add to your agenda are 1000 Islands River Rat Cheese and Clayton Marina. Check out what more to see and do in Expedia's Clayton guide.
What's the weather like in Clayton?
The hottest months are usually July and August with an average temp of 66°F, while the coldest months are January and February with an average of 26°F. The snowiest months in Clayton are January, February, March, and November, with each month seeing an average of 18 inches of snowfall.

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