A beach with clear water, palm trees, and people relaxing on the sand.

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Check prices for these dates

In two weeks
Oct 23 - Oct 25
In two months
Dec 4 - Dec 6
In three months
Jan 1 - Jan 3
In four months
Jan 29 - Jan 31

Our top choices for Marathon houseboats

A waterfront property with floating houses connected by a wooden dock.

1. Yacht Haven Marina

Yacht Haven Marina
3.5 star property
Marathon
9.6 out of 10, Exceptional, (370 reviews)
"Loved staying in the aqua lodges, such a relaxing place."
United States
Lauren
The price is ￥16,911
￥41,229 total
includes taxes & fees
Oct 26 - Oct 27
Yacht Haven Marina
A floating houseboat with a covered deck and seating area, docked at a marina.

2. Aqua Lodge Rentals At Coconut Cay

Aqua Lodge Rentals At Coconut Cay
3.5 star property
Marathon
9.6 out of 10, Exceptional, (237 reviews)
"Never stayed in a houseboat before. It was a novel experience!"
United States
Susan
The price is ￥13,173
￥38,506 total
includes taxes & fees
Oct 13 - Oct 14
Aqua Lodge Rentals At Coconut Cay
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
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Top Marathon Hotel Reviews

Tranquility Bay Beachfront Hotel and Resort

Tranquility Bay Beachfront Hotel and Resort

10/10 Excellent
"Good"
Pablo Miguel 1-night trip
Posted 17 hours ago
Tranquility Bay Beachfront Hotel and Resort

Find out more about Marathon

Marathon Houseboats information

Number of reviews
Accommodation
2 Houseboats
Lowest Price
￥38,506
Highest Price
￥41,229

Frequently asked questions

Why book your houseboat in Marathon with Expedia?
Expedia makes it a breeze to find houseboats in Marathon — from cute and cozy options to floating palaces fit for a queen (or king!). If you have a certain budget, select how much you're willing to spend and your preferred star rating. We'll help you find the right stay whatever your escape looks like.
How can I find cheap houseboats in Marathon?
If you're on the lookout for fantastic deals on houseboats in Marathon, you'll want to add a few filters to your search. You can sort your results by price so that the cheapest options appear at the top. Then, adjust your filters to suit your budget. Also, remember to join our free rewards program, One Key™, for exclusive offers and deals. Expedia can help you find your perfect floating escape whatever your bank balance or plans.
What is there to do in Marathon near my houseboat?
Marathon has enough activities and experiences to keep you entertained for weeks, beginning with Dolphin Research Center. Florida Keys Aquarium Encounters, Sombrero Beach and Seven Mile Bridge are other wonderful attractions. If you're in town a while, Coco Plum Beach and Curry Hammock State Park will cap off your itinerary nicely.