A marina filled with boats and a city skyline at dusk.

Find hotels in Harbor Island, San Diego from ￥15,201

Dates

November 2026

December 2026

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Compare popular hotels in Harbor Island

Property	Star rating	Guest rating
Sheraton San Diego Resort	4.0 star property	8.6 Excellent 3,815 reviews	View
Hilton San Diego Airport/Harbor Island	3.5 star property	8.8 Excellent 1,222 reviews	View
Hampton Inn & Suites San Diego Airport Liberty Station	2.5 star property	9.2 Wonderful 1,743 reviews	View
Homewood Suites by Hilton San Diego Airport/Liberty Station	3.0 star property	9.4 Exceptional 1,711 reviews	View
Holiday Inn Express San Diego Airport - Old Town by IHG	2.5 star property	9.2 Wonderful 1,102 reviews	View

Where to stay in Harbor Island

Find the best Harbor Island areas and neighborhoods for the activities you enjoy most.

A large stadium with the sign "Cobo Park" and palm trees around it.

Downtown San Diego

Cultural and financial hub, Downtown San Diego boasts the Symphony, Opera, theaters, museums, and historic sites like Gaslamp Quarter. Enjoy diverse shops, dining, nightlife, and convenient public transport options.

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A pier extending into the ocean with buildings at the end, under a partly cloudy sky.

Pacific Beach

Boasting a lively nightlife scene, Pacific Beach offers miles of sandy shores, a bustling 3.2-mile boardwalk, and attractions like Crystal Pier and Kate Sessions Park. Enjoy local shops, bars, and eateries along the vibrant walkway.

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Gaslamp Quarter

Downtown San Diego's historic district boasts Victorian-era buildings, now housing vibrant restaurants, shops, and entertainment venues. Stroll from Broadway to Harbor Drive, and 4th to 6th Avenue, admiring the newly installed gaslamps at Market Street.

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A coastal cityscape with a long sandy beach, a pier, and dense urban buildings.

Mission Beach

Spanning nearly two miles of oceanfront, this sandbar community offers sunbathing, surfing, and beach volleyball, with nearby attractions like Belmont Park's Giant Dipper Roller Coaster and SeaWorld in Mission Bay Park.

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An aerial view of a coastal city with a marina, a large body of water, and a peninsula with buildings.

Mission Bay

If you're spending some time in Mission Bay, Mission Bay and Ski Beach are top sights worth seeing.

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Top Harbor Island Hotel Reviews

A marina with boats docked, a balcony with chairs, and a view of the water.

Hilton San Diego Airport/Harbor Island

Harbor Island

10/10 Excellent

Hilda

A spacious lobby with a large seating area, a wooden ceiling, and large windows offering a view of the outdoor patio area.

Hampton Inn & Suites San Diego Airport Liberty Station

San Diego

10/10 Excellent

Erika

A hotel complex with multiple buildings, a landscaped garden, and a body of water reflecting the sunset.

Homewood Suites by Hilton San Diego Airport/Liberty Station

Point Loma

10/10 Excellent

Payton

A table with a fire feature, a charcuterie board, and two glasses of wine, overlooking a marina with boats.

Bay Club Hotel & Marina

Point Loma

10/10 Excellent

Pat

A hotel entrance with a stone archway, a reception desk, and potted plants.

Holiday Inn Express San Diego Airport - Old Town by IHG

Mission Hills

10/10 Excellent

Angela

A resort with two-story buildings, balconies, and a pool area.

Humphreys Half Moon Inn

Point Loma

10/10 Excellent

Kailey

A high-rise building complex with multiple floors, large windows, and a waterfront view.

Manchester Grand Hyatt San Diego

Downtown San Diego

10/10 Excellent

Ernest

A modern hotel with a courtyard featuring outdoor seating, a chess table, and a well-maintained lawn.

Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

Point Loma

10/10 Excellent

Daniel

A modern building with a sloped roof and large windows, surrounded by palm trees and a well-maintained garden.

Best Western Plus Island Palms Hotel & Marina

Point Loma

10/10 Excellent

Taylor

A pool area with lounge chairs and a hot tub, overlooking the ocean.

The Wayfarer San Diego

Mission Beach

10/10 Excellent

Sarah

A modern interior with a sectional sofa, a glass coffee table, and large windows offering a view of the cityscape.

Best Western Plus Bayside Inn

Downtown San Diego

10/10 Excellent

I had stayed here originally like 10 years ago. It is in a great location, clean, and one of the more inexpensive hotels in the area. So I was wondering how run down it would be ten years later. I was amazed at how nice the building was. It had undergone a renovation at some point into a more modern look. Everything about our stay here was fantastic. We even stayed an extra night. We really liked that there are balconies with patio sliding doors. We had the door open when we were there...

Courtney

A spacious kitchen with a central island, wooden ceiling, and modern lighting fixtures.

Holiday Inn Express San Diego - SeaWorld Area by IHG

Point Loma

10/10 Excellent

Jania

A hotel room with a large window offering a city view, a bed, a chair, and a small table.

The DEXTRO Little Italy, BW Premier Collection

Downtown San Diego

10/10 Excellent

Debra

A building with a "Bienvenidos" sign, palm trees, and a well-maintained garden.

Old Town Inn

Point Loma

10/10 Excellent

We had two rooms next to each other on the ground floor, that were very comfortable. The amenities such as a refrigerator in the room, a screened window that opens for ventilation, great AC, and a very nice pool area with great seating and landscaping, were features that will bring us back to this hotel. We enjoyed the free breakfast options and used the microwave also when we had leftovers from a restaurant. The staff were friendly and helpful also. Summer prices were reasonable compared to...

Debra

An outdoor patio area with tables and chairs, string lights, and a building with balconies.

Fairfield Inn & Suites San Diego Old Town

Old Town San Diego

10/10 Excellent

Joseph

A hotel courtyard with outdoor seating, palm trees, and a view of the ocean at dusk.

Wyndham San Diego Bayside

Downtown San Diego

10/10 Excellent

john

A room with a large window overlooking a marina with boats and a bridge in the distance.

Hilton Garden Inn San Diego Downtown/Bayside

Downtown San Diego

10/10 Excellent

Sheri

An outdoor seating area with fire pits, lounge chairs, and a modern building in the background.

Homewood Suites by Hilton San Diego Hotel Circle/SeaWorld Area

Mission Valley

10/10 Excellent

Rosemary

Frequently Asked Questions

What's it like in Harbor Island?

Harbor Island is a scenic neighborhood known for its beautiful island views and array of dining options. Consider a visit to San Diego Bay as part of your Harbor Island travel plans.

Where is the best hotel for a stay in Harbor Island?

Based on our traveler data, Sheraton San Diego Resort is one of the top choices for your stay in Harbor Island. This hotel is a short 1-minute walk from San Diego Bay, and it offers a marina and 3 outdoor pools.

How many hotels will I find in Harbor Island?

Book one of Expedia's 6 hotels and other accommodations in Harbor Island and start exploring everything San Diego has to offer.

If I need to cancel my hotel reservation in Harbor Island, will I receive a refund?

Yes, the majority of hotel bookings are fully refundable if you cancel before the accommodation's cancellation deadline, which is often 24 or 48 hours before your check-in date. If you have a reservation that's non-refundable, it may still be possible to cancel it and receive a refund within a 24-hour period of your booking. Enter dates in and click on "Search", then you can use the "fully refundable" filter to get the best deals in Harbor Island.

Where can I learn more about changing or cancelling my trip to Harbor Island?

For more information about rescheduling or cancelling your trip to Harbor Island, head over to our customer service page.

What is there to do around this San Diego neighborhood?

San Diego Bay is an attraction you might want to check out while you're in Harbor Island. While you're out sightseeing in San Diego, be sure to visit other sights like Marine Corps Recruit Depot or Port of San Diego.

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Find hotels in Harbor Island, San Diego from ￥15,201

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Our top choices for Harbor Island hotels

1. Hilton San Diego Airport/Harbor Island

2. Sheraton San Diego Resort

3. Hampton Inn & Suites San Diego Airport Liberty Station

4. Homewood Suites by Hilton San Diego Airport/Liberty Station

5. Humphreys Half Moon Inn

6. Bay Club Hotel & Marina

7. Holiday Inn Express San Diego - SeaWorld Area by IHG

8. Manchester Grand Hyatt San Diego

9. Wyndham San Diego Bayside

10. Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

11. Best Western Plus Bayside Inn

12. The DEXTRO Little Italy, BW Premier Collection

13. Homewood Suites by Hilton San Diego Hotel Circle/SeaWorld Area

14. Crowne Plaza San Diego - Mission Valley by IHG

15. Wyndham Garden San Diego Near SeaWorld

16. The Sofia Hotel

17. Holiday Inn Express San Diego Airport - Old Town by IHG

18. Hampton Inn San Diego-Downtown

19. Hilton Garden Inn San Diego Downtown/Bayside

20. Best Western Inn & Suites San Diego – Zoo/SeaWorld Area

Compare popular hotels in Harbor Island

Where to stay in Harbor Island

Downtown San Diego

Pacific Beach

Gaslamp Quarter

Mission Beach

Mission Bay

Top Harbor Island Hotel Reviews

Hilton San Diego Airport/Harbor Island

10/10 Excellent

Frequently Asked Questions

What's it like in Harbor Island?

Where is the best hotel for a stay in Harbor Island?

How many hotels will I find in Harbor Island?

If I need to cancel my hotel reservation in Harbor Island, will I receive a refund?

Where can I learn more about changing or cancelling my trip to Harbor Island?

What is there to do around this San Diego neighborhood?

Explore a world of travel with Expedia