Find hotels in San Juan Islands, WA from ¥11,260

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Compare 587 hotels, room rates, hotel reviews and availability. Most hotels are fully refundable.

Trumpeter Inn

3.0 star property
10.0 out of 10, Exceptional, (232)
"The property is stunning, and the hosts were exceptional. We thoroughly enjoyed exploring the farm, and the breakfast was especially delightful."
The price is ¥34,774
¥38,374 total
includes taxes & fees
Sep 15 - Sep 16
Trumpeter Inn

Roche Harbor Resort

3.0 star property
9.2 out of 10, Wonderful, (392)
"Fantastic stay!"
Roche Harbor Resort

Friday Harbor Suites

2.5 star property
8.4 out of 10, Very Good, (1001)
"Everyone was very professional. Helpful and very nice. We would stay again!!"
The price is ¥34,958
¥38,680 total
includes taxes & fees
Sep 7 - Sep 8
Friday Harbor Suites

Outlook Inn

3.0 star property
9.2 out of 10, Wonderful, (487)
"Great spot"
The price is ¥54,765
¥62,641 total
includes taxes & fees
Sep 15 - Sep 16
Outlook Inn

West Beach Resort

3.5 star property
9.2 out of 10, Wonderful, (100)
"Great view! Hosts were very friendly and helpful!"
The price is ¥60,495
¥66,756 total
includes taxes & fees
Sep 7 - Sep 8
West Beach Resort

Kangaroo House B&B on Orcas Island

3.5 star property
10.0 out of 10, Exceptional, (156)
"Great venue and breakfasts."
The price is ¥36,216
¥39,963 total
includes taxes & fees
Aug 25 - Aug 26
Kangaroo House B&B on Orcas Island

Earthbox Inn & Spa

3.0 star property
8.8 out of 10, Excellent, (962)
"Great place! Close to everything and quiet!"
The price is ¥37,533
¥41,532 total
includes taxes & fees
Sep 1 - Sep 2
Earthbox Inn & Spa

Bird Rock Hotel

2.0 star property
8.8 out of 10, Excellent, (351)
"Beautiful historic property! Situated in middle of everything! Clean property."
The price is ¥32,971
¥36,481 total
includes taxes & fees
Sep 1 - Sep 2
Bird Rock Hotel

Lopez Islander Resort

3.5 star property
8.4 out of 10, Very Good, (343)
"Great location"
The price is ¥33,707
¥37,197 total
includes taxes & fees
Sep 3 - Sep 4
Lopez Islander Resort

Lopez Farm Cottages & Tent Camping

2.0 star property
10.0 out of 10, Exceptional, (26)
"We enjoyed the quiet surroundings and comfortable accommodations. Mari and Jordy were gracious and helpful hosts."
The price is ¥29,641
¥32,709 total
includes taxes & fees
Aug 18 - Aug 19
Lopez Farm Cottages & Tent Camping

Tucker House Inn

4.0 star property
9.4 out of 10, Exceptional, (268)
"Beautiful and quiet destination."
The price is ¥39,316
¥43,502 total
includes taxes & fees
Sep 15 - Sep 16
Tucker House Inn

Deer Harbor Inn

3.0 star property
8.4 out of 10, Very Good, (184)
"Nice to stay. "
The price is ¥38,762
¥42,774 total
includes taxes & fees
Aug 18 - Aug 19
Deer Harbor Inn

Friday Harbor House

3.5 star property
9.6 out of 10, Exceptional, (224)
"Loved the location, the view, the room, and the hotel restaurant brunch! Had a wonderful time"
The price is ¥59,589
¥65,935 total
includes taxes & fees
Sep 7 - Sep 8
Friday Harbor House

The Orca Inn

2.0 star property
7.8 out of 10, Good, (1000)
"Had a very nice stay. "
The price is ¥20,303
¥22,464 total
includes taxes & fees
Aug 18 - Aug 19
The Orca Inn

The Edenwild Boutique Inn

2.5 star property
9.4 out of 10, Exceptional, (252)
"This place is cute and quaint, and the location is perfect - walkable to everything in the main "village" area. The rooms are unique (I peaked inside a few) and homey, and there are many lovely common areas such as outdoor seating and a wraparound porch. It was calm and quiet despite being fully booked, and when we did run into other guests it felt like we were all friends staying together. "
The price is ¥32,653
¥36,032 total
includes taxes & fees
Aug 21 - Aug 22
The Edenwild Boutique Inn

Rosario Village

2.0 star property
7.2 out of 10, Good, (65)
"The main mansion is being renovated and doesn’t look that great. The carpet in the room was so stained, it was yucky and no screen on the slider so we couldn’t leave it open and it was quite hot/stuffy inside the room and no a/c, but I did find two fans in the closet. Staff were very responsive via text and code got us into the room easily. Restaurant walking distance was great!!!"
The price is ¥30,361
¥33,503 total
includes taxes & fees
Sep 15 - Sep 16
Rosario Village

Saturn's Return

2.0 star property
9.6 out of 10, Exceptional, (22)
"Very quiet and peaceful place. Emma was very nice and we really enjoyed the farm."
The price is ¥57,836
¥63,822 total
includes taxes & fees
Sep 1 - Sep 2
Saturn's Return

Quality Inn Grand Suites Bellingham

2.5 star property
6.6 out of 10, (1001)
"It's a quiet place with friendly and helpful staff, close to a shopping plaza, and several dining options nearby."
The price is ¥11,260
¥12,940 total
includes taxes & fees
Sep 7 - Sep 8
Quality Inn Grand Suites Bellingham

Baymont by Wyndham Bellingham

2.5 star property
7.2 out of 10, Good, (472)
"Nice place"
The price is ¥11,760
¥13,496 total
includes taxes & fees
Sep 7 - Sep 8
Baymont by Wyndham Bellingham

Comfort Inn Bellingham

2.5 star property
7.0 out of 10, Good, (1001)
"Nice place"
The price is ¥13,843
¥15,808 total
includes taxes & fees
Aug 19 - Aug 20
Comfort Inn Bellingham
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
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Stay near popular San Juan Islands attractions

Lime Kiln Point State Park
Lime Kiln Point State Park showing a house and forests

Lime Kiln Point State Park

Also known as Whale Watch Park, this diving site is one of the best places in the world to view wild orca pods from the shore.

Pelindaba Lavender Farm
Not all Lavender is reserved for Sequim!

Pelindaba Lavender Farm

Enjoy an outing to Pelindaba Lavender Farm during your stay in Friday Harbor. While you're in the area, stroll along the waterfront.

Doe Bay Hot Springs

Doe Bay Hot Springs

You can take time to visit Doe Bay Hot Springs during your travels to Doe Bay. Wander the waterfront or discover the area's sunsets.

Learn more about San Juan Islands

Kayaking between forested islands reveals hidden coves and curious seals, while orcas breach offshore during whale-watching tours. Hike Mount Constitution on Orcas Island for sweeping views, then explore Friday Harbor's galleries and savor fresh-caught seafood at waterfront restaurants.

Lime Kiln Point State Park featuring heritage architecture, rocky coastline and a lighthouse

Top San Juan Islands Hotel Reviews