Nagasaki Prefecture Vacations & Trips from ￥64,000

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Top destinations in Nagasaki Prefecture

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Nagasaki

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The Latest Nagasaki Prefecture Vacation Packages

Price found within the past 48 hours. Click for updated prices.
Grand Base Urakami

Grand Base Urakami

3 out of 5
Price was ￥90,560, price is now ￥64,000 per person
￥64,000
per person
Oct 11 - Oct 13
found 1 day ago
Roundtrip flight included
Tokyo (HND) to Nagasaki (NGS)
8.6/10 Excellent! (54 reviews)
Check in process was confusing with the tablet. No real person to check you in. There was a fee of 500 yen per person which we did not know about. The elevator had a very bad odor. Limited amenities inside the room, only provided towels and toothbrush. No umbrellas provided. The room also had a very bad odor. Bed was hard and uncomfortable. Overall ok stay.

Reviewed on Aug 11, 2025

UNZEN HANZUIRYO

UNZEN HANZUIRYO

4 out of 5
Price was ￥237,408, price is now ￥103,384 per person
￥103,384
per person
Nov 7 - Nov 9
found 1 day ago
Roundtrip flight included
Tokyo (HND) to Nagasaki (NGS)
10/10 Exceptional! (3 reviews)
Shisekiryokan Kagetsu Taisyokan

Shisekiryokan Kagetsu Taisyokan

3 out of 5
Save 100% on your flight
Price was ￥216,116, price is now ￥138,338 per person
￥138,338
per person
Nov 7 - Nov 10
found 1 day ago
Roundtrip flight included
Tokyo (HND) to Nagasaki (NGS)
8/10 Very Good! (1 review)
Hotel Nagasaki

Hotel Nagasaki

3 out of 5
Save 100% on your flight
Price was ￥99,610, price is now ￥66,929 per person
￥66,929
per person
Nov 2 - Nov 4
found 22 hours ago
Roundtrip flight included
Tokyo (TYO) to Nagasaki (NGS)
8.4/10 Very Good! (224 reviews)
This is an amazing. Way exceed my expectation and the service is great. The staff is also very helpful and go extra steps to help.

Reviewed on Jan 7, 2025

GRAND BASE Nagasaki Nakamachi

GRAND BASE Nagasaki Nakamachi

3 out of 5
Price was ￥92,560, price is now ￥65,282 per person
￥65,282
per person
Oct 11 - Oct 13
found 1 day ago
Roundtrip flight included
Tokyo (HND) to Nagasaki (NGS)
8.6/10 Excellent! (34 reviews)
The room overall was nice with the separate washroom and traditional shower, a kitchen, and a TV. The only bad part was the cleanliness of the couch and beds. The couch had an unlimited amount of stains from who knows where. The beds also had a bit of a stench to them, but you get used to it after a bit.

Reviewed on May 17, 2025

Where to stay in Nagasaki Prefecture

Find the best Nagasaki Prefecture areas and neighborhoods for the activities you enjoy most. Learn more about Nagasaki Prefecture
Nagasaki Chinatown showing signage and street scenes

Nagasaki Chinatown

5/5(11 area reviews)

It’s bright and bold and provides an exciting perspective on the city. Walk through this area to experience various businesses and cultural aspects.

Find hotels in Nagasaki Chinatown

Nagasaki Prefecture Hotel Deals

Hotel Nikko Huis Ten Bosch

Hotel Nikko Huis Ten Bosch

3.5 out of 5
6 Huis Ten Bosch, Sasebo, Nagasaki-ken
Fully refundableReserve now, pay when you stay
The price is ￥17,354 per night from Aug 31 to Sep 1
￥17,354
￥20,998 total
Aug 31 - Sep 1
Hotel Nikko Huis Ten Bosch
Hotel Okura JR Huis Ten Bosch

Hotel Okura JR Huis Ten Bosch

4 out of 5
10 Huis Ten Bosch cho, Sasebo, Nagasaki
Fully refundableReserve now, pay when you stay
The price is ￥11,526 per night from Sep 10 to Sep 11
￥11,526
￥14,920 total
Sep 10 - Sep 11
Hotel Okura JR Huis Ten Bosch
Hotel Forza Nagasaki

Hotel Forza Nagasaki

3.5 out of 5
4-11 Hamamachi, Nagasaki
The price is ￥5,232 per night from Sep 1 to Sep 2
￥5,232
￥5,839 total
Sep 1 - Sep 2
Hotel Forza Nagasaki
See all 788 properties in Nagasaki Prefecture
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Frequently asked questions

How much does a Nagasaki Prefecture vacation package cost?
Choose from any combination of flights, hotels and car rentals, and you can be vacationing in Nagasaki Prefecture from just ￥64,000. And the more you bundle, the more you save. Your dream escape has never been more affordable.
How do I get a cheap travel package to Nagasaki Prefecture?
Just think of all the fun things you could do in Nagasaki Prefecture with a wad of extra cash in your pocket. Watch your savings stack up when you combine your hotel and flights into a Nagasaki Prefecture vacation package. You have loads of choice when you book your trip with Expedia too. In fact, you can choose from more than 550 air carriers and 1,000,000 hotels across the globe. Whether you're heading off with the entire family or surprising your special someone, exploring Nagasaki Prefecture is better with a package.
Where should I stay in Nagasaki Prefecture?
If you've always dreamed of exploring Nagasaki Atomic Bomb Museum and Glover Garden, Nagasaki is calling your name.
What are the top hotels in Nagasaki Prefecture?
Look up Quintessa Hotel Sasebo and Smile Hotel Sasebo. They're the first choice for many travelers headed to Nagasaki. If Sasebo is on your travel itinerary, Toyoko Inn Sasebo Ekimae and Hotel Resol Sasebo are both great options.
How far in advance should I book my Nagasaki Prefecture vacation?
To bag cheap prices, book ASAP. Airlines usually release tickets, along with some of the lowest fares, around a year in advance. Hotels, car rental and activities should also be booked well in advance so you can have the pick of the bunch. If you've decided on a last-minute getaway in Nagasaki Prefecture, there are always plenty of great deals on Expedia. Book your escape today!
What does an Expedia Nagasaki Prefecture travel package include?
That's up to you. You can select from a range of Nagasaki Prefecture bundles, such as a rental car, flight and hotel. You can also book a flight and a hotel, or a rental car with a flight. Once you've made your booking, you can add on the fun stuff like tours and activities. Whatever your Nagasaki Prefecture break looks like, you're sure to save!
What should I know before booking a Nagasaki Prefecture travel package?
A travel package can be easier on the bank balance than separately booking everything you need for your escape. For example, combine your hotels, flights and rental cars and save a packet. Whatever your vacation plans, you're sure to find a package that's perfect for you.
If I'm not able to travel, can I cancel my Nagasaki Prefecture vacation package?
It's difficult to predict what tomorrow might bring, so it's comforting to know that you can change or cancel your Nagasaki Prefecture vacation package. If your booking was made in the last 24 hours, you may be eligible for a refund. If it's an older booking, your airline, hotel or car rental company may charge a fee. Visit our Customer Service Portal for more information.

Discover the most popular places to visit in Nagasaki Prefecture

Huis Ten Bosch

Huis Ten Bosch

4.5/5(9 reviews)

Have a fun-filled day at Huis Ten Bosch and find out why this is a popular theme park in Sasebo. Stroll along the seaside or visit the spas while you're in the area.

Huis Ten Bosch
Nagasaki

Hamanomachi Arcade

4/5(1 review)

During your visit to Nagasaki, you can search for that perfect souvenir at Hamanomachi Arcade. Wander the waterfront and Chinatown in the area.

Hamanomachi Arcade
Glover Garden

Glover Garden

4.5/5(16 reviews)

Climb the hill and be treated to two features: a panoramic city view and estates of wealthy magnates. The harbor activity below is fascinating to watch.

Glover Garden

What to do in Nagasaki Prefecture

Nagasaki Like a Local: Customized Guided Tour

Nagasaki Like a Local: Customized Guided Tour

￥14,780
per adult
Nagasaki Like a Local: Customized Guided Tour
The photo that you will remember most from your day with me.

Nagasaki WW2 History and Culture Tour

￥100,000
per traveler
Nagasaki WW2 History and Culture Tour
Nagasaki Full Day Tour with Licensed Guide and Vehicle

Nagasaki Full Day Tour with Licensed Guide and Vehicle

￥90,900
per traveler
Nagasaki Full Day Tour with Licensed Guide and Vehicle
See all activities in Nagasaki Prefecture

Other vacations you might like

* Savings based on package bookings compared to the price of the same components booked separately. Savings not available on all packages.