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Our top choices for Mission Bay hotels

San Diego Mission Bay Resort

San Diego Mission Bay Resort
4.0 star property
Mission Bay
8.6 out of 10, Excellent, (1,445 reviews)
"Perfect place for a family trip "
United States
Krystal
The price is ¥29,875
¥42,740 total
includes taxes & fees
May 20 - May 21
San Diego Mission Bay Resort

Paradise Point Resort & Spa

Paradise Point Resort & Spa
4.0 star property
Mission Bay
8.8 out of 10, Excellent, (2,599 reviews)
"Phenomenal stay!! "
United States
Raymond
The price is ¥34,553
¥48,122 total
includes taxes & fees
May 25 - May 26
Paradise Point Resort & Spa

Hyatt Regency Mission Bay Spa and Marina

Hyatt Regency Mission Bay Spa and Marina
4.0 star property
Mission Bay
8.4 out of 10, Very Good, (1,647 reviews)
"This property is simply amazing, from the ambiance, to the amenities, and the staff…just terrific. The heated pool and the poolside restaurant are great."
United States
Carolina
The price is ¥28,431
¥41,084 total
includes taxes & fees
May 21 - May 22
Hyatt Regency Mission Bay Spa and Marina

The Dana on Mission Bay

The Dana on Mission Bay
3.5 star property
Mission Bay
9.0 out of 10, Wonderful, (4,363 reviews)
"NICE PLACE TO STAY"
United States
René
The price is ¥31,607
¥40,895 total
includes taxes & fees
May 25 - May 26
The Dana on Mission Bay

The Alcala Hotel Mission Valley/Seaworld

The Alcala Hotel Mission Valley/Seaworld
2.5 star property
3.6 km from Mission Bay
8.2 out of 10, Very Good, (68 reviews)
"Everything was perfect, the staff very friendly place was clean and minutes away from everything ( by car )"
United States
Jorge
The price is ¥13,175
¥15,144 total
includes taxes & fees
May 26 - May 27
The Alcala Hotel Mission Valley/Seaworld

Sheraton San Diego Resort

Sheraton San Diego Resort
4.0 star property
6 km from Mission Bay
8.4 out of 10, Very Good, (3,536 reviews)
"Excellent food, friendly staff, easy check-in, and beautiful setting. "
United States
Emily
The price is ¥26,842
¥38,888 total
includes taxes & fees
May 24 - May 25
Sheraton San Diego Resort

Lafayette Hotel & Club

Lafayette Hotel & Club
4.0 star property
8.1 km from Mission Bay
9.4 out of 10, Exceptional, (1,654 reviews)
"This is a must stay place in San Diego"
United States
Kristi
The price is ¥39,549
¥45,461 total
includes taxes & fees
May 21 - May 22
Lafayette Hotel & Club

Ramada by Wyndham San Diego Poway Miramar

Ramada by Wyndham San Diego Poway Miramar
2.0 star property
24.7 km from Mission Bay
7.2 out of 10, Good, (1,005 reviews)
"Well maintained property, staff were professional and very nice"
United States
Cherie
The price is ¥13,421
¥14,764 total
includes taxes & fees
May 25 - May 26
Ramada by Wyndham San Diego Poway Miramar

Marriott Marquis San Diego Marina

Marriott Marquis San Diego Marina
4.0 star property
9.3 km from Mission Bay
9.2 out of 10, Wonderful, (2,133 reviews)
"Excellent stay!"
United States
Joyce
The price is ¥34,148
¥47,120 total
includes taxes & fees
May 25 - May 26
Marriott Marquis San Diego Marina

Bahia Resort Hotel

Bahia Resort Hotel
3.5 star property
Central Mission Beach, 2.3 km from Mission Bay
8.8 out of 10, Excellent, (2,083 reviews)
"Nice place to stay with the kids."
United States
Paul
The price is ¥27,017
¥39,885 total
includes taxes & fees
May 20 - May 21
Bahia Resort Hotel

Hilton Garden Inn San Diego Old Town/SeaWorld Area

Hilton Garden Inn San Diego Old Town/SeaWorld Area
3.0 star property
Old Town San Diego, 3.1 km from Mission Bay
8.8 out of 10, Excellent, (1,446 reviews)
"Very nice stay, would love to stay there again"
United States
Erika
The price is ¥21,325
¥24,512 total
includes taxes & fees
May 31 - Jun 1
Hilton Garden Inn San Diego Old Town/SeaWorld Area

Best Western San Diego/Miramar Hotel

Best Western San Diego/Miramar Hotel
2.5 star property
16.1 km from Mission Bay
8.0 out of 10, Very Good, (1,335 reviews)
"Wonderful, kind staff and good breakfast"
United States
Kimberly
The price is ¥16,677
¥19,170 total
includes taxes & fees
May 20 - May 21
Best Western San Diego/Miramar Hotel

California Suites Hotel

California Suites Hotel
2.0 star property
7.8 km from Mission Bay
7.8 out of 10, Good, (2,548 reviews)
"Very comfortable, nice pool and hot tub, quiet, pretty location, and close to lots of stuff! Would stay here again! "
United States
Stephon
The price is ¥12,286
¥14,099 total
includes taxes & fees
May 20 - May 21
California Suites Hotel

Best Western Plus Marina Gateway Hotel

Best Western Plus Marina Gateway Hotel
3.5 star property
16.7 km from Mission Bay
9.2 out of 10, Wonderful, (3,831 reviews)
"Great resort "
United States
Ines
The price is ¥21,299
¥23,470 total
includes taxes & fees
May 20 - May 21
Best Western Plus Marina Gateway Hotel

Wyndham San Diego Bayside

Wyndham San Diego Bayside
4.0 star property
8 km from Mission Bay
8.4 out of 10, Very Good, (6,172 reviews)
"Was a pleasant property where the restaurant attached has great dining options"
Canada
Rika
The price is ¥26,842
¥36,649 total
includes taxes & fees
May 25 - May 26
Wyndham San Diego Bayside

The Encinitan Hotel & Suites

The Encinitan Hotel & Suites
3.0 star property
30.9 km from Mission Bay
8.2 out of 10, Very Good, (1,550 reviews)
"Really great location and kind staff!! "
Canada
Sarah
The price is ¥18,845
¥23,147 total
includes taxes & fees
May 26 - May 27
The Encinitan Hotel & Suites

Wyndham Garden San Diego Near SeaWorld

Wyndham Garden San Diego Near SeaWorld
3.0 star property
2.6 km from Mission Bay
7.4 out of 10, Good, (4,233 reviews)
"Great overall stay. Would stay again. "
United States
German
The price is ¥14,128
¥16,239 total
includes taxes & fees
May 31 - Jun 1
Wyndham Garden San Diego Near SeaWorld

Embassy Suites by Hilton San Diego Bay Downtown

Embassy Suites by Hilton San Diego Bay Downtown
4.0 star property
8.7 km from Mission Bay
9.0 out of 10, Wonderful, (1,773 reviews)
"Great stay!"
United States
Miguel
The price is ¥31,779
¥42,608 total
includes taxes & fees
May 26 - May 27
Embassy Suites by Hilton San Diego Bay Downtown

GreenTree Inn San Diego Mission Bay

GreenTree Inn San Diego Mission Bay
2.5 star property
Pacific Beach, 3 km from Mission Bay
8.0 out of 10, Very Good, (2,111 reviews)
"Great experience, will stay here again"
United States
Victoria
The price is ¥14,504
¥16,672 total
includes taxes & fees
May 25 - May 26
GreenTree Inn San Diego Mission Bay

Comfort Inn Sea World Area

Comfort Inn Sea World Area
3.5 star property
2.9 km from Mission Bay
8.6 out of 10, Excellent, (3,677 reviews)
"Room is clean, staff are especially helpful and courteous, breakfast was great…all in all made my stay comfortable and convenient because just minutes away from the airport…would stay here again"
United States
Parley Vinn Anastacius
The price is ¥15,724
¥18,074 total
includes taxes & fees
May 25 - May 26
Comfort Inn Sea World Area
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Where to stay in Mission Bay

Find the best Mission Bay areas and neighborhoods for the activities you enjoy most.

Downtown San Diego

Cultural and financial hub, Downtown San Diego boasts the Symphony, Opera, theaters, museums, and historic sites like Gaslamp Quarter. Enjoy diverse shops, dining, nightlife, and convenient public transport options.

Pacific Beach

Boasting a lively nightlife scene, Pacific Beach offers miles of sandy shores, a bustling 3.2-mile boardwalk, and attractions like Crystal Pier and Kate Sessions Park. Enjoy local shops, bars, and eateries along the vibrant walkway.

Mission Beach

Spanning nearly two miles of oceanfront, this sandbar community offers sunbathing, surfing, and beach volleyball, with nearby attractions like Belmont Park's Giant Dipper Roller Coaster and SeaWorld in Mission Bay Park.

Gaslamp Quarter

Downtown San Diego's historic district boasts Victorian-era buildings, now housing vibrant restaurants, shops, and entertainment venues. Stroll from Broadway to Harbor Drive, and 4th to 6th Avenue, admiring the newly installed gaslamps at Market Street.

Ocean Beach

Ocean Beach is known for its stunning beaches, and with sights like Dog Beach and Ocean Beach, you won't get bored spending a day wandering around this part of San Diego.

Top Mission Bay Hotel Reviews

Frequently asked questions

What is Mission Bay like?
You'll be sure to have fun visiting San Diego's Mission Bay neighborhood. Looking for sights you might find in a travel guide about Mission Bay? Consider a visit to Mission Bay while you're in the neighborhood.
What's a favorite hotel to stay in Mission Bay?
Based on our traveler data, Paradise Point Resort & Spa is one of the top choices for your stay in Mission Bay. This resort offers a marina and 5 outdoor pools. Other good options for your stay in the neighborhood include Hyatt Regency Mission Bay Spa and Marina and The Dana on Mission Bay.
How many hotels should I expect to find in Mission Bay?
If you're searching for places to stay in San Diego, Expedia has something to meet your needs with 46 Mission Bay hotels and other accommodations to choose from.
If I need to cancel my hotel reservation in Mission Bay, will I receive a refund?
Yes, you'll find most room reservations are refundable provided that you cancel prior to the accommodation's cancellation deadline, which is usually within 24-48 hours of your check-in date. If your reservation is non-refundable, you might be able to cancel it and be given a refund within a 24-hour period of your booking. Add your dates and click on "Search", then use the filter option "fully refundable" to view the best options available in Mission Bay.
Where can I learn more about changing or cancelling my trip to Mission Bay?
To find more details about updating your trip to Mission Bay or cancelling it, head over to our customer service page.
What is there to do around this San Diego neighborhood?
Enjoy a stroll along the shore at Mission and Pacific Beaches, Ski Beach, and Crown Point Shores while you're in Mission Bay. You could also plan a visit to Mission Bay or North Cove Beach while you're in the neighborhood. Mission Beach and Hotel Circle are some favorite places to visit in the area around Mission Bay. When you're sightseeing in San Diego, Bahia Point Beach and Bay City Brewing Co. are also worth a stop.