Find hotels near Junipero Serra Museum, San Diego from ￥16,000

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Our top choices for Junipero Serra Museum hotels

Pool
Old Town Inn

Old Town Inn

Old Town Inn
2.5 star property
1.1 km from Junipero Serra Museum
9.2 out of 10, Wonderful, (1791)
"Excellent place"
United States
Subrahmanyam
Old Town Inn
Reception
Hampton Inn & Suites by Hilton San Diego SeaWorld

Hampton Inn & Suites by Hilton San Diego SeaWorld

Hampton Inn & Suites by Hilton San Diego SeaWorld
3.0 star property
1.2 km from Junipero Serra Museum
9.2 out of 10, Wonderful, (459)
"Clean room, helpful staff, convenient location "
United States
David
The price is ￥18,428
￥21,182 total
includes taxes & fees
Jan 19 - Jan 20, 2026
Hampton Inn & Suites by Hilton San Diego SeaWorld
BBQ/picnic area
Holiday Inn Express San Diego Airport - Old Town by IHG

Holiday Inn Express San Diego Airport - Old Town by IHG

Holiday Inn Express San Diego Airport - Old Town by IHG
2.5 star property
1.7 km from Junipero Serra Museum
9.2 out of 10, Wonderful, (1050)
"Easy check in, clean room, the little store is very convenient. "
United States
Sherlene
The price is ￥21,268
￥24,446 total
includes taxes & fees
Jan 1 - Jan 2, 2026
Holiday Inn Express San Diego Airport - Old Town by IHG
Garden
Legacy Resort Hotel & Spa

Legacy Resort Hotel & Spa

Legacy Resort Hotel & Spa
4.0 star property
2.2 km from Junipero Serra Museum
9.2 out of 10, Wonderful, (2949)
"Great boutique hotel!!"
United States
Maksim
The price is ￥25,193
￥28,958 total
includes taxes & fees
Jan 4 - Jan 5, 2026
Legacy Resort Hotel & Spa
Terrace/patio
Homewood Suites by Hilton San Diego Hotel Circle/SeaWorld Area

Homewood Suites by Hilton San Diego Hotel Circle/SeaWorld Area

Homewood Suites by Hilton San Diego Hotel Circle/SeaWorld Area
3.0 star property
1 km from Junipero Serra Museum
8.8 out of 10, Excellent, (1334)
"Great stay!"
United States
Foumi
The price is ￥19,748
￥22,699 total
includes taxes & fees
Jan 11 - Jan 12, 2026
Homewood Suites by Hilton San Diego Hotel Circle/SeaWorld Area
Reception
Kings Inn San Diego

Kings Inn San Diego

Kings Inn San Diego
2.5 star property
1.8 km from Junipero Serra Museum
8.8 out of 10, Excellent, (3581)
"Nice staff, clean rooms and the Waffle Spot!!!!"
United States
brent
Kings Inn San Diego
Lobby
Fairfield Inn & Suites San Diego Old Town

Fairfield Inn & Suites San Diego Old Town

Fairfield Inn & Suites San Diego Old Town
2.5 star property
Old Town San Diego, 1.2 km from Junipero Serra Museum
8.8 out of 10, Excellent, (1002)
"Great stay, nice staff!"
United States
Vaughn
The price is ￥19,892
￥22,864 total
includes taxes & fees
Jan 18 - Jan 19, 2026
Fairfield Inn & Suites San Diego Old Town
Exterior
Holiday Inn Express & Suites San Diego - Mission Valley by IHG

Holiday Inn Express & Suites San Diego - Mission Valley by IHG

Holiday Inn Express & Suites San Diego - Mission Valley by IHG
2.5 star property
2.3 km from Junipero Serra Museum
8.8 out of 10, Excellent, (1001)
" Great stay"
United States
Aasialynn
The price is ￥16,889
￥19,835 total
includes taxes & fees
Jan 4 - Jan 5, 2026
Holiday Inn Express & Suites San Diego - Mission Valley by IHG
Suite, Multiple Beds | In-room safe, desk, laptop workspace, blackout drapes
Holiday Inn Express San Diego - SeaWorld Area by IHG

Holiday Inn Express San Diego - SeaWorld Area by IHG

Holiday Inn Express San Diego - SeaWorld Area by IHG
2.5 star property
2.5 km from Junipero Serra Museum
8.8 out of 10, Excellent, (1001)
"Nice hotel one bus stop from SeaWorld "
United States
Marc
The price is ￥19,860
￥22,829 total
includes taxes & fees
Jan 4 - Jan 5, 2026
Holiday Inn Express San Diego - SeaWorld Area by IHG
Exterior
Hilton Garden Inn San Diego Old Town/SeaWorld Area

Hilton Garden Inn San Diego Old Town/SeaWorld Area

Hilton Garden Inn San Diego Old Town/SeaWorld Area
3.0 star property
Old Town San Diego, 0.4 km from Junipero Serra Museum
8.6 out of 10, Excellent, (1313)
"Clean room and friendly staff. Close to old town and family friendly!"
United States
Daisy
The price is ￥19,107
￥21,962 total
includes taxes & fees
Jan 18 - Jan 19, 2026
Hilton Garden Inn San Diego Old Town/SeaWorld Area
Terrace/patio
Hampton Inn San Diego/Mission Valley

Hampton Inn San Diego/Mission Valley

Hampton Inn San Diego/Mission Valley
2.5 star property
1.1 km from Junipero Serra Museum
8.6 out of 10, Excellent, (1337)
"Clean room, Good breakfast and close to all attractions"
United States
SRIVANI
The price is ￥14,418
￥16,573 total
includes taxes & fees
Jan 25 - Jan 26, 2026
Hampton Inn San Diego/Mission Valley
Standard Room, 2 Queen Beds, Non Smoking | In-room safe, desk, laptop workspace, blackout drapes
Comfort Inn Sea World Area

Comfort Inn Sea World Area

Comfort Inn Sea World Area
3.5 star property
1.2 km from Junipero Serra Museum
8.6 out of 10, Excellent, (3195)
"Room was clean and friendly staff"
United States
Raghavendra
The price is ￥13,920
￥16,000 total
includes taxes & fees
Jan 19 - Jan 20, 2026
Comfort Inn Sea World Area
Exterior
Courtyard by Marriott Old Town

Courtyard by Marriott Old Town

Courtyard by Marriott Old Town
3.0 star property
Old Town San Diego, 1 km from Junipero Serra Museum
8.6 out of 10, Excellent, (1005)
"Great stay!!! Will be staying again! "
United States
Raven
The price is ￥18,640
￥21,426 total
includes taxes & fees
Jan 8 - Jan 9, 2026
Courtyard by Marriott Old Town
2 outdoor pools, a heated pool, cabanas (surcharge), sun loungers
Town and Country San Diego

Town and Country San Diego

Town and Country San Diego
4.0 star property
2.3 km from Junipero Serra Museum
8.6 out of 10, Excellent, (1327)
"Great Resort, the staff were nice"
United States
Aryana
The price is ￥22,464
￥31,218 total
includes taxes & fees
Jan 2 - Jan 3, 2026
Town and Country San Diego
Outdoor pool, sun loungers
Best Western Plus Hacienda Hotel Old Town

Best Western Plus Hacienda Hotel Old Town

Best Western Plus Hacienda Hotel Old Town
3.0 star property
Old Town San Diego, 0.7 km from Junipero Serra Museum
8.4 out of 10, Very Good, (1868)
"Great location, friendly staff, clean room. "
United States
Marleny
The price is ￥18,157
￥20,871 total
includes taxes & fees
Jan 5 - Jan 6, 2026
Best Western Plus Hacienda Hotel Old Town
Breakfast and dinner served
Courtyard by Marriott San Diego Mission Valley/Hotel Circle

Courtyard by Marriott San Diego Mission Valley/Hotel Circle

Courtyard by Marriott San Diego Mission Valley/Hotel Circle
3.5 star property
2.4 km from Junipero Serra Museum
8.4 out of 10, Very Good, (1441)
"Staff was very friendly, everything was very clean. "
United States
Cristine
The price is ￥15,638
￥17,975 total
includes taxes & fees
Jan 5 - Jan 6, 2026
Courtyard by Marriott San Diego Mission Valley/Hotel Circle
Outdoor pool, open 7:00 AM to 10:00 PM, cabanas (surcharge)
San Diego Mission Bay Resort

San Diego Mission Bay Resort

San Diego Mission Bay Resort
4.0 star property
Mission Bay, 2.6 km from Junipero Serra Museum
8.4 out of 10, Very Good, (1317)
"Room was super clean and updated, location up against the bay was perfect. We really enjoyed our stay and want to come back soon!"
United States
Haley
The price is ￥21,455
￥32,930 total
includes taxes & fees
Jan 4 - Jan 5, 2026
San Diego Mission Bay Resort
Exterior
Homewood Suites by Hilton San Diego Mission Valley/Zoo

Homewood Suites by Hilton San Diego Mission Valley/Zoo

Homewood Suites by Hilton San Diego Mission Valley/Zoo
3.0 star property
3.2 km from Junipero Serra Museum
8.4 out of 10, Very Good, (1001)
"wonderful place to stay"
United States
FNU
The price is ￥19,802
￥22,762 total
includes taxes & fees
Jan 7 - Jan 8, 2026
Homewood Suites by Hilton San Diego Mission Valley/Zoo
Exterior
Comfort Inn San Diego Old Town

Comfort Inn San Diego Old Town

Comfort Inn San Diego Old Town
2.5 star property
Old Town San Diego, 1.1 km from Junipero Serra Museum
8.2 out of 10, Very Good, (1918)
"Great stay "
United States
Vanessa
The price is ￥14,224
￥16,350 total
includes taxes & fees
Jan 19 - Jan 20, 2026
Comfort Inn San Diego Old Town
Outdoor pool, pool umbrellas, sun loungers
Handlery Hotel

Handlery Hotel

Handlery Hotel
3.5 star property
2 km from Junipero Serra Museum
8.2 out of 10, Very Good, (2262)
"Room and staff were excellent"
United States
Bryant
Handlery Hotel
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
View all properties

Top Junipero Serra Museum Hotel Reviews

Hampton Inn & Suites by Hilton San Diego SeaWorld

Hampton Inn & Suites by Hilton San Diego SeaWorld

10/10 Excellent
"Room was clean and spacious. Campus was clean. Breakfast was good for continental breakfast. I would stay there again. "
Ralph 4-night trip
Posted 12 hours ago
Hampton Inn & Suites by Hilton San Diego SeaWorld

Hotels near other Junipero Serra Museum attractions

Presidio Park is a city historic park in San Diego, California. It is the site where the San Diego Presidio and the San Diego Mission, the first European settlements in what is now the Western United States, were founded in 1769.
Photo by Kamala Venkatesh
Open Photo by Kamala Venkatesh

Presidio Park

After visiting Presidio Park, make a plan to see the other sights and activities in San Diego. Wander the area's seaside or simply enjoy one of its top-notch restaurants.
See properties
Super cool houses built around 1890. Some of the first around here I think.
Photo by Mark Ghazal
Open Photo by Mark Ghazal

Heritage Park

Heritage Park is just one of the places to see in San Diego, so why not enjoy the other things to explore during your travels? In the area, take in the acclaimed art scene and beautiful sunsets.
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Frequently asked questions

What's the area like around Junipero Serra Museum?
Junipero Serra Museum is located in a historic area of San Diego known for its popular zoo and top museums. If you're looking for a convenient place to stay, check out the 68 hotels and other accommodations you'll find within a mile.
What's the best place to stay close to Junipero Serra Museum?
Adjacent to Junipero Serra Museum, Hilton Garden Inn San Diego Old Town/SeaWorld Area is one of the top choices for your stay based on our traveler data, and this hotel offers a restaurant and an outdoor pool. Other good choices close by include Hampton Inn San Diego/Mission Valley and Best Western Inn & Suites San Diego – Zoo/SeaWorld Area.
How many hotels will I be able to find near Junipero Serra Museum?
Expedia has 68 hotels and other accommodations within a mile from Junipero Serra Museum.
If I need to cancel the hotel reservation for my stay near Junipero Serra Museum, will I receive a refund?
Yes, you'll find most hotel reservations are fully refundable if you cancel prior to the accommodation's cancellation deadline, which in most cases is within 24 or 48 hours of your check-in date. If you have a reservation that's non-refundable, you might be able to still cancel and receive a refund within a 24-hour period of your booking. Add your dates and click on "Search", then use the "fully refundable" filter to get the top deals on offer near Junipero Serra Museum.
Where can I learn more about changing or cancelling my trip in the area near Junipero Serra Museum?
To find more details about rescheduling or cancelling your stay near Junipero Serra Museum, go to https://www.expedia.com/service/.
What can I see and do near Junipero Serra Museum?
Study the collections at Maritime Museum of San Diego, San Diego Museum of Art, or San Diego Air and Space Museum. Whaley House Museum, Star of India, and Casa de Balboa are some of the local landmarks to explore. You can check out the local talent at Old Globe Theater, Humphreys Concerts by the Bay, and San Diego Civic Theatre.
How can I get to Junipero Serra Museum?
With so many transportation options, seeing all of the area near Junipero Serra Museum is easy. To see more of the larger area, hop aboard a train at Old Town Transit Center. You can explore options for water transportation at the local port.