The Best Cheap Hotels in Bonita, CA from ￥15,811 in 2026

A suburban area with a golf course, residential houses, a bridge, and distant mountains.

Change your mind
Book hotels with free cancellation
Treat yourself
Sign in to save 10% or more on thousands of hotels
Sign in
Be picky
Search almost a million properties worldwide

Check availability on Bonita Cheap Hotels

Tonight

Tomorrow

This weekend

Next weekend

Our top choices for Bonita cheap hotels

1. Comfort Inn Chula Vista San Diego South

Chula Vista

Xiaolei

￥20,483 total

includes taxes & fees

Sep 1 - Sep 2

2. La Quinta Inn by Wyndham San Diego Chula Vista

Chula Vista

Andrea

￥21,804 total

includes taxes & fees

Aug 6 - Aug 7

3. Holiday Inn Express San Diego South - Chula Vista by IHG

Chula Vista

￥25,741 total

includes taxes & fees

Sep 3 - Sep 4

Premium bedding, in-room safe, desk, laptop workspace

4. Best Western Plus Marina Gateway Hotel

National City

Stephanie

￥27,564 total

includes taxes & fees

Aug 5 - Aug 6

5. The Rambler Hotel

Chula Vista

Tracy

￥17,461 total

includes taxes & fees

Aug 12 - Aug 13

6. Ayres Hotel San Diego South - Chula Vista

Otay Ranch

Joanna

￥27,772 total

includes taxes & fees

Sep 3 - Sep 4

7. Hercor Hotel - Urban Boutique

Chula Vista

Keane

￥18,109 total

includes taxes & fees

Sep 3 - Sep 4

Premium bedding, desk, blackout drapes, soundproofing

8. Valli Hi Motel

San Ysidro

elizabeth E

￥15,811 total

includes taxes & fees

Aug 18 - Aug 19

View all properties

Top Bonita Hotel Reviews

Best Western Inn & Suites San Diego – Zoo/SeaWorld Area

10/10 Excellent

"Everything about our stay was great! We checked in at 1 am and the older lady working that shift was so sweet! Thank you!"

Bay Club Hotel & Marina

10/10 Excellent

"Everything was great. We were in two different rooms and they were both very nice, especially the second one which was a King suite with a sofa bed. Great location with two balconies and a great view to the outside concert venue next door (free concert!). If I had to complain about anything, it would be the bathroom (in both rooms) and the carpet on the staircase leading to the second floor. They looked old and run down but I'm sure it's in the works to get renovated because, overall, the hotel is great. Great views, great bar and restaurant and the food was also very good."

Frequently asked questions

What is Bonita like for travelers on a budget?

Explore cheap places to stay in Bonita on Expedia.com and book a trip that fits your budget. You can look through a variety of hotels and other types of accommodation with Member Prices to score the best deal for you. With our site's handy page filters, you can limit results by price per night, or by popular amenities like free breakfast and free airport transportation. If you're interested in affordable options near specific attractions, such as Chula Vista Municipal Golf Course - Mountain or Sweetwater Summit Regional Park, try filtering by location to refine your search. As you browse, use the heart button to save your favorites so that it's easy to find them when you're ready to book. Need a flight or a rental car along with your hotel? Take a look at the Bundle and Save travel packages and discover huge discounts when you reserve your transportation at the same time.

When is the best time for a budget trip to Bonita?

Weather will likely play an important role when you plan your trip to Bonita, and keep in mind that cheaper options are usually available when the weather isn't as good. The hottest months are usually August and September with an average temp of 72°F, while the coldest months are February and January with an average of 58°F. Average annual precipitation for Bonita is 13 inches.

What is there to see and do in Bonita?

You don't need to spend big to take advantage of things to see and do in Bonita. You can budget for the top local attractions on your list, such as Petco Park and San Diego Zoo, and then make time for other wallet-friendly activities. Take in the local culture at USS Midway Museum and North Island Credit Union Amphitheatre, or enjoy the area's natural beauty at Rohr Dog Park.

How can I get to Bonita and get around on a budget?

Scoping out the transportation options in Bonita can help keep you on budget. The nearest airport is Tijuana Intl. Airport (TIJ), situated 8.5 mi (13.7 km) away. However, if that doesn't suit your budget, you can arrange flights in and out of San Diego Intl. Airport (SAN), which is 10.7 mi (17.3 km) away. Bonita might not have very many public transit options so renting a car could be an economical alternative to see the area.

Explore a world of travel with Expedia

Coronado Vacations

Book Cheap Hotels in Bonita on Expedia.com

Room 1

Change your mind

Treat yourself

Be picky

Check availability on Bonita Cheap Hotels

Our top choices for Bonita cheap hotels

1. Comfort Inn Chula Vista San Diego South

2. La Quinta Inn by Wyndham San Diego Chula Vista

3. Holiday Inn Express San Diego South - Chula Vista by IHG