Find hotels in Santo Tomás from ¥5,878

Start date: Check-in selected.
To Date
End date: Check-out
  • Change your mind

    Book hotels with free cancellation
  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
  • Be picky

    Search almost a million properties worldwide

Check prices for these dates

Filter by

Guest rating
Guest rating
Star rating

Our top choices for Santo Tomás hotels

Hotel La Laguna Galapagos

Hotel La Laguna Galapagos
3.0 star property
Puerto Villamil
9.0 out of 10, Wonderful, (99)
Situated 1.3 mi from José de Villamil Airport, this Galapagos retreat offers 2 hot tubs and an outdoor pool. Guests enjoy complimentary airport shuttle, breakfast, and easy access to El Embarcadero Pier and Concha de Perla Nature Park.

"The view is amazing, and the staff is always helpful. I have no complaintsñ it's the best place to stay in Isabela."
Mexico
Saul
Hotel La Laguna Galapagos

HOSPEDAJE DELFIN AZUL

HOSPEDAJE DELFIN AZUL
3.0 star property
Puerto Villamil
7.0 out of 10, Good, (2)
Situated near El Embarcadero Pier and Concha de Perla Nature Park, this cozy retreat offers a garden setting to unwind after exploring. Enjoy morning refreshments at the café, evening drinks at the bar, and convenient access to natural wonders.

"Owner was nice and kind. "
Canada
Florence
The price is ¥3,887
¥7,774 total
Dec 13 - Dec 14
HOSPEDAJE DELFIN AZUL

Hostal Galapagos by Bar de Beto

Hostal Galapagos by Bar de Beto
2.0 star property
Puerto Villamil
8.0 out of 10, Very Good, (40)
This beach hostal sits adjacent to Galápagos National Park, featuring a lively nightclub and scenic rooftop terrace. Enjoy complimentary WiFi, relax at the bar, and explore nearby hiking trails, kayaking, and snorkeling spots. El Embarcadero Pier is just moments away.

"My stay was great and the Hotel is nicely located close to the beach. "
United States
Jefferson
The price is ¥10,286
¥10,286 total
Dec 14 - Dec 15
Hostal Galapagos by Bar de Beto

Hotel Isamar Galapagos Beachfront

Hotel Isamar Galapagos Beachfront
3.5 star property
Puerto Villamil
9.0 out of 10, Wonderful, (60)
Wake to magical mornings on an amazing beach at this Galapagos retreat. Just minutes from José de Villamil Airport, the hotel offers deep-tissue massages and facials, plus regional dishes at Isamar Restaurante. El Embarcadero Pier and Concha de Perla Nature Park are nearby.

"Relaxing room facing a deck with immediate access to the beach. Beach is clean and nice view. Helpful staff and free coffee always available."
United States
Suming
Hotel Isamar Galapagos Beachfront

Hotel Albemarle Galapagos Beachfront

Hotel Albemarle Galapagos Beachfront
3.5 star property
Puerto Villamil
9.0 out of 10, Wonderful, (91)
Mediterranean-style haven with outdoor pool and garden terrace just steps from Galápagos National Park. Explore El Embarcadero Pier and Concha de Perla Nature Park, then return for a drink at the café. Friendly staff ensure a memorable island experience.

"I really like this hotel, excellent location just by the beach, great breakfast and the employees very nice, polite and fantastic customer service also alot of restaurants very close. I will recommend all my family and friends to stay here."
United States
Jorge A.
Hotel Albemarle Galapagos Beachfront

Gran Hostal Tintorera

Gran Hostal Tintorera
3.0 star property
Puerto Villamil
9.0 out of 10, Wonderful, (112)
Escape to this welcoming hostal just minutes from José de Villamil Airport. Enjoy free breakfast and WiFi, plus convenient shuttle service. Steps from Galápagos National Park with El Embarcadero Pier and Concha de Perla Nature Park nearby, friendly staff enhance your stay.

"I have so many great things to say about my stay! Our room was very clean and we received cleaning service whenever we wanted, we loved our cold AC and hot showers ! We enjoyed our breakfast buffet in the mornings and Dani and her family made us feel at home. We can’t wait to visit them again ! "
United States
Valerie
Gran Hostal Tintorera

Hotel La Gran Tortuga

Hotel La Gran Tortuga
3.0 star property
Puerto Villamil
9.0 out of 10, Wonderful, (7)
Explore Puerto Villamil's natural wonders from this convenient hotel near El Embarcadero Pier and Concha de Perla Nature Park. Enjoy snorkeling adventures, free WiFi, and parking during your island stay.

"I enjoyed my stay here. Nothing fancy but the rooms are clean, the bed was comfy, and the shower was hot. They serve a tasty continental breakfast and all the staff were very friendly. "
Canada
Robert
Hotel La Gran Tortuga

Cormorant Beach House

Cormorant Beach House
3.5 star property
Puerto Villamil
9.6 out of 10, Exceptional, (80)
"Excellent stay"
United States
William Christopher
The price is ¥22,167
¥24,406 total
Dec 14 - Dec 15
Cormorant Beach House

Hotel Volcano

Hotel Volcano
3.5 star property
Puerto Villamil
9.2 out of 10, Wonderful, (57)
Located just steps from Galápagos National Park in Puerto Villamil, this hotel offers free breakfast and daily housekeeping. Nearby attractions include El Embarcadero Pier and Posada de Flamengos, with laundry facilities for travelers' convenience.

"Sophia was a great hostess! The ocean view was spectacular. Hotel Volcan is a nice place to stay with great beds. "
United States
Curtis
Hotel Volcano

Galápagos Isabela Hotel Loja

Galápagos Isabela Hotel Loja
3.0 star property
Puerto Villamil
10.0 out of 10, Exceptional, (6)
Perfectly positioned beside Galápagos National Park, this Puerto Villamil retreat offers an outdoor pool and convenient beach shuttle. Visit nearby El Embarcadero Pier after enjoying the free breakfast, WiFi, and parking.

"The hotel was nice, great bathroom, large room and nice pool. The staff were friendly and helpful"
United States
Antony
The price is ¥11,538
¥11,538 total
Dec 20 - Dec 21
Galápagos Isabela Hotel Loja

Cartago Bay

Cartago Bay
2.5 star property
Puerto Villamil
8.0 out of 10, Very Good, (6)
"Very poor internet. Otherwise a nice clean place with nice people. She got up early to get us something to eat for a 5AM departure "
United States
DAVID
Cartago Bay

Hostal Las Gardenias

Hostal Las Gardenias
3.0 star property
Puerto Villamil
9.0 out of 10, Wonderful, (9)
Located steps from Galápagos National Park in Puerto Villamil, this hotel offers convenient access to El Embarcadero Pier and Concha de Perla Nature Park. Enjoy free WiFi while exploring this remarkable island destination.

"Friendly staff"
United States
Joel
The price is ¥10,612
¥10,612 total
Dec 15 - Dec 16
Hostal Las Gardenias

Aparthotel Casa Soleil

Aparthotel Casa Soleil
2.5 star property
Puerto Villamil
10.0 out of 10, Exceptional, (3)
Discover island charm in Puerto Villamil with easy access to El Embarcadero Pier. This hotel offers daily housekeeping and sits moments from Concha de Perla Nature Park, creating a perfect base for exploring natural wonders.

"Close to airport and town center. Very clean. "
Canada
Maria
Aparthotel Casa Soleil

La Casita de la Playa

La Casita de la Playa
3.0 star property
Puerto Villamil
9.0 out of 10, Wonderful, (79)
Embrace the natural splendor of Galápagos National Park from this beachfront retreat with breathtaking ocean views. A serene terrace and garden complement the stunning location, while the attentive staff ensures a memorable island experience near El Embarcadero Pier.

"Amazing staff, location on the beach, good breakfast, nice sitting area in the front to enjoy the ocean view. "
Canada
Julie
La Casita de la Playa

HOTEL SIERRA NEGRA

HOTEL SIERRA NEGRA
3.0 star property
Puerto Villamil
8.6 out of 10, Excellent, (38)
Discover pristine shores in Puerto Villamil at this welcoming coastal retreat. Just steps from Galápagos National Park, El Embarcadero Pier, and Concha de Perla Nature Park, while enjoying easy beach access and complimentary WiFi.

"Excellent beach front hotel with close proximity to the town center. Staff is very friendly and helpful, room was clean with hot water and clean sheets and towels. Would come back to Theo property if back to Isabela "
United States
Elena
The price is ¥9,796
¥9,796 total
Dec 13 - Dec 14
HOTEL SIERRA NEGRA

El Paraiso de Isabela

El Paraiso de Isabela
3.0 star property
Puerto Villamil
7.8 out of 10, Good, (41)
Immerse yourself in natural wonder at this Puerto Villamil hotel, just steps from Galápagos National Park. Enjoy snorkeling adventures near El Embarcadero Pier and Concha de Perla Nature Park, with 24-hour front desk service and convenient airport transfers.

"Clean, large room, close to restaurants and travel agencies "
Canada
Roberto
El Paraiso de Isabela

Hotel Cally Galapagos

Hotel Cally Galapagos
3.0 star property
Puerto Villamil
8.6 out of 10, Excellent, (26)
Unwind at this tranquil Galapagos retreat featuring 2 beach bars and massage services. Just minutes from El Embarcadero Pier and Concha de Perla Nature Park, with convenient airport transportation only 15 minutes away.

"Very nice hotel, excellent location… Gabriel and his family managing the hotel were always ready to help… 24 hour free coffee and water stations were very helpful… breakfast was amazing with fresh fruits and different juices each day. Highly recommend the hotel…"
United States
Jayen
The price is ¥16,811
¥16,811 total
Dec 18 - Dec 19
Hotel Cally Galapagos

Iguana Crossing Boutique Hotel

Iguana Crossing Boutique Hotel
3.0 star property
Puerto Villamil
8.8 out of 10, Excellent, (83)
Dive into adventure at this beachfront hotel steps from Galápagos National Park. After exploring El Embarcadero Pier, cool off in the outdoor pool before enjoying a meal at the on-site restaurant with room service available.

"Very quiet hotel."
Canada
Giovani
The price is ¥44,641
¥49,105 total
Dec 13 - Dec 14
Iguana Crossing Boutique Hotel

Hotel San Vicente Galapagos

Hotel San Vicente Galapagos
3.0 star property
Puerto Villamil
7.8 out of 10, Good, (13)
Experience Puerto Villamil's natural beauty at this convenient hotel just minutes from El Embarcadero Pier and Concha de Perla Nature Park. After exploring on free bicycles, unwind in the hot tub, enjoy garden views, or savor meals at the on-site restaurant.

"The hotel is great, the service is excellent, with a very friendly staff. I would definitely stay here if I go back to Isabela. Thank you! "
United States
MARIO
The price is ¥11,543
¥12,697 total
Jan 1 - Jan 2, 2026
Hotel San Vicente Galapagos

La Casa de Marita

La Casa de Marita
3.0 star property
Puerto Villamil
9.0 out of 10, Wonderful, (98)
Colonial charm meets island paradise at this Puerto Villamil hotel with a rooftop terrace and garden. Grab a coffee at the café or unwind with a drink at the bar after exploring nearby El Embarcadero Pier and Concha de Perla Nature Park.

"Great"
United States
Aleksandr
La Casa de Marita
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
Save an average of 15% on thousands of hotels when you're signed in

Top Santo Tomás Hotel Reviews

More cheap stays in Santo Tomás

Frequently asked questions

Where is the best place to stay in Santo Tomás?
Located 7.7 mi (12.5 km) from the heart of Santo Tomás, Hotel Albemarle Galapagos Beachfront is a top choice for your stay based on our traveler data. Two other choices for your trip to the area are Gran Hostal Tintorera and Cormorant Beach House. See all available top hotels, or vacation rentals in Santo Tomás.
What are some of the best vacation rentals that Santo Tomás has to offer?
Flip Flop House: Located near Santo Tomás, this vacation home rental is located near the beach and has a terrace, a private yard, and air-conditioning to put you at ease in your new surroundings. Kitchen amenities include a full-sized fridge, a stovetop, and a microwave. You and your friends and family can relax into your vacation with amenities like a selection of games. See all vacation rentals in Santo Tomás.
If I need to cancel my hotel reservation in Santo Tomás, will I receive a refund?
Yes, the majority of hotel reservations are fully refundable as long as you cancel before the accommodation's cancellation deadline, which is usually within 24-48 hours of your arrival date. If you booked a non-refundable reservation, it may still be possible to cancel it and get a refund within a 24-hour period of booking. Filter your search by fully refundable to find flexible hotel deals in Santo Tomás.
Where can I learn more about changing or cancelling my trip to Santo Tomás?
To find more details about rescheduling or cancelling your trip to Santo Tomás, head over to our customer service page.
How is it staying in Santo Tomás?
Those traveling to Santo Tomás are sure to enjoy the sights to see and things to do. There are 83 hotels and other accommodations in the surrounding area. Find out more about Santo Tomás.
What should I do while I'm visiting Santo Tomás?
Places to visit in the wider area include Puerto Villamil Beach, El Embarcadero Pier, and Concha de Perla Nature Park. You'll also find Tortuga Island and Wall of Tears Historical Site in the area. Check out what more to see and do in Expedia's Santo Tomás guide.
What's the weather like in Santo Tomás?
The hottest months are usually March and February with an average temp of 79°F, while the coldest months are September and October with an average of 72°F. Average annual precipitation for Santo Tomás is 13 inches.