The Best Hotels Closest to Labuan Bajo Port in Labuan Bajo for 2026

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Our top choices for Labuan Bajo Port hotels

A waterfront resort with a curved building, outdoor seating, and a view of a distant island.

A resort with a swimming pool, beach, and overwater bungalows.

A wooden deck with seating and a bar area, overlooking a body of water with overwater bungalows in the background.

1. TA’AKTANA, a Luxury Collection Resort & Spa, Labuan Bajo

2.2 km from Labuan Bajo Port

Iliana

￥129,168

￥156,294 total

includes taxes & fees

Nov 1 - Nov 2

A balcony with wicker chairs and a table, overlooking a turquoise sea with boats and a pier.

A wooden pier with a gazebo, tables, and umbrellas extending into a clear blue sea.

A pool with clear blue water, palm trees, and a distant view of a pier and mountains.

An aerial view of a small island with clear turquoise waters, a sandy beach, and a few boats.

2. AYANA Komodo Waecicu Beach

2.8 km from Labuan Bajo Port

Marvin

￥26,618

￥32,208 total

includes taxes & fees

Oct 22 - Oct 23

A resort with overwater bungalows connected by walkways, surrounded by clear turquoise water and lush green hills.

A spacious lobby with a modern design, featuring a large seating area, wooden accents, and large windows offering a view of the sea.

A sunlit infinity pool with lounge chairs and umbrellas, overlooking a body of water and a distant island.

A wooden deck with a massage chair and a small table with glasses and a bottle, overlooking a calm sea at sunset.

3. Katamaran Hotel & Resort Komodo

2.4 km from Labuan Bajo Port

Anna

￥20,514

￥25,002 total

includes taxes & fees

Oct 30 - Oct 31

A coastal landscape with a small island, clear waters, and distant mountains.

A couple seated at a table with a view of boats on a body of water, surrounded by flowers and candles.

A spacious lobby with wicker furniture, a bar area, and a sign for Meruora Hotel.

A poolside area with lounge chairs and a view of a harbor with boats.

4. Meruorah Komodo Labuan Bajo

0.3 km from Labuan Bajo Port

Rob

￥14,419

￥17,821 total

includes taxes & fees

Nov 10 - Nov 11

A pool area with lounge chairs and umbrellas, a wooden deck, and a mountain in the background.

A rooftop terrace with a curved seating area, a small table, and a pergola structure.

A corridor with white walls, blue shutters, and a wooden ceiling.

A modern bedroom with a large bed, bedside tables, a hanging light fixture, and built-in shelving with storage boxes.

5. Seaesta Komodo Hotel & Hostel

0.3 km from Labuan Bajo Port

Portia

￥8,245

￥9,977 total

includes taxes & fees

Nov 19 - Nov 20

A bedroom with a large bed, a desk, and a view of the outdoors.

A room with a wooden bench, a refrigerator, a painting on the wall, and a coffee maker.

A modern kitchen with a wooden countertop, a built-in sink, and a flat-screen TV mounted on the wall.

A room with a wooden table, two black chairs, a window with a view of trees, and a TV mounted on the wall.

6. Komodo Suites Downtown

0.3 km from Labuan Bajo Port

Michael

￥7,036

￥8,626 total

includes taxes & fees

Nov 19 - Nov 20

A swimming pool with a lighthouse and boats in the background.

A hotel room with a bed, a desk, a TV, a chair, and a window with a view of a building.

A reception desk with a sign reading "RECEPTION" and a wall with the text "HAOUR KOMODO HOTEL".

A room with a wooden door, a small trash bin, a wooden desk with a chair, a sofa, and a window with curtains.

7. Harbour Komodo Hotel

0.3 km from Labuan Bajo Port

Douglas

￥6,454

￥7,809 total

includes taxes & fees

Nov 1 - Nov 2

A garden pathway leading to a rustic wooden structure with a thatched roof.

A bedroom with a bed, a wooden door, a window with curtains, and a small table with a plant.

A spacious room with a high ceiling, large windows, and a table with chairs.

A bathroom with a toilet, sink, and shower.

8. Palulu Garden Homestay

0.3 km from Labuan Bajo Port

Carrington

￥1,759

￥2,190 total

includes taxes & fees

Oct 25 - Oct 26

A stone pathway surrounded by lush greenery and various tropical plants.

A wooden bridge with a red floor, supported by bamboo poles, surrounded by lush greenery.

A hotel room with a bed, a desk, a chair, a window with curtains, and a door.

A corridor with wooden chairs and tables, bamboo partitions, and large windows with views of greenery.

9. Centro Bajo Hotel

1.7 km from Labuan Bajo Port

Carrington

￥2,030

￥2,509 total

includes taxes & fees

Oct 28 - Oct 29

An outdoor dining area with wooden tables and chairs, overlooking a scenic view of the sea and hills.

A poolside area with wooden deck, seating, and a view of the ocean.

A modern hotel room with a large bed, a TV, a sofa, and a view of the city.

A bakery with a display counter, shelves with baked goods, and a wall with inspirational quotes.

10. ZASGO HOTEL

0.9 km from Labuan Bajo Port

Trevor

￥8,161

￥9,875 total

includes taxes & fees

Oct 24 - Oct 25

A poolside area with lounge chairs and a view of the sea and boats.

A modern hotel room with a large bed, a wooden headboard, a seating area with a table and chairs, and a bathroom with a mirror and sink.

A modern bedroom with a wooden bed, a desk, and a chair.

A room with a wooden wardrobe, a desk with a chair, a mirror, and a television.

11. OhJulia Hotel Komodo

0.2 km from Labuan Bajo Port

Kizzy

￥10,420

￥12,608 total

includes taxes & fees

Nov 2 - Nov 3

A coastal landscape with clear turquoise waters, a sandy beach, and boats in the distance.

A swimming pool with lounge chairs and umbrellas, surrounded by greenery and a small building.

A sign for a bed and breakfast named "WORLD B&B" with a pathway leading to the building surrounded by tropical plants.

A bedroom with a large bed, wooden headboard, and a ceiling fan. There are two bedside tables with lamps and a wooden wardrobe.

12. World BnB

2.3 km from Labuan Bajo Port

Anne

￥3,195

￥3,880 total

includes taxes & fees

Nov 19 - Nov 20

A balcony with a view of a marina, boats, and a pier.

A modern kitchen with a built-in bar area, featuring a granite countertop, dark cabinetry, and a decorative wooden wall panel.

A modern lobby with seating, a reception desk, and a wall-mounted sign.

A modern bathroom with a white sink, mirror, and toilet.

13. Flamingo Ceria

0.2 km from Labuan Bajo Port

Stephanie

￥5,339

￥6,572 total

includes taxes & fees

Nov 19 - Nov 20

A two-story building with balconies, large windows, and a flat roof.

A bedroom with a wooden bed, a desk, and a view of a garden.

A multi-level building with a central staircase, outdoor seating area with tables and chairs, and lush greenery.

A bathroom with a sink, mirror, shower, and a blue door.

14. Hotel Bonne Nuit

1 km from Labuan Bajo Port

Tereza

￥2,240

￥3,055 total

includes taxes & fees

Nov 2 - Nov 3

Two wooden cabins with balconies, a swimming pool, and lush greenery.

A neatly made bed with white linens and pillows, a decorative swan pillow, and a woven headboard.

A long wooden table with various dishes and drinks, set in an outdoor area with bamboo plants and a view of the sea.

15. Pavilla Labuan Bajo

1.6 km from Labuan Bajo Port

Richard

￥2,445

￥3,016 total

includes taxes & fees

Oct 23 - Oct 24

A stone archway entrance to a building with a dining area visible inside.

A dining area with tables covered in white tablecloths, wooden chairs, and a tiled floor.

A hotel room with two beds, a desk, and a chair.

A person sitting at a desk with a red VAIO laptop and a brochure.

16. Komodo Boutique Hotel

2.8 km from Labuan Bajo Port

Tianhao

￥2,637

￥3,246 total

includes taxes & fees

Nov 19 - Nov 20

A modern hotel with a pool area, lounge chairs, and umbrellas.

A modern interior with a bar area, seating, and a view of a lush garden.

A coastal landscape with a clear beach, boats, and mountainous terrain.

A spacious lobby with a modern design, featuring a large seating area, a dining space, and a view of the outdoors.

17. Crowne Plaza Labuan Bajo by IHG

1.5 km from Labuan Bajo Port

nicole

￥17,960

￥21,732 total

includes taxes & fees

Nov 13 - Nov 14

A pool area with multiple water features, surrounded by tropical vegetation and a view of the sea.

An outdoor dining area with tables and chairs, surrounded by a wooden deck and a rope barrier.

A beachfront hotel with a red-roofed building, palm trees, and a view of the sea.

A pathway through a lush garden with palm trees and various greenery.

18. Bintang Flores Hotel

1.8 km from Labuan Bajo Port

Conny Oktorina

￥10,828

￥13,102 total

includes taxes & fees

Nov 2 - Nov 3

A building with a balcony covered in hanging vines, a staircase, and a view of a body of water.

A coastal marina with boats, a lighthouse, and a pier.

A hotel room with a large bed, a desk with a chair, a small round table, a wooden bench, a window with curtains, and a door.

A reception desk at Komodo Lodge with a wooden backdrop, a TV screen, and a sign indicating the location of the toilet.

19. Komodo Lodge

0.4 km from Labuan Bajo Port

Mark

￥4,890

￥5,917 total

includes taxes & fees

Oct 26 - Oct 27

A poolside view with thatched-roof structures and palm trees at sunset.

A beach with overwater bungalows and a pier extending into calm waters.

An aerial view of a resort with a swimming pool, palm trees, and red-roofed buildings.

A spacious indoor dining area with wooden ceiling and large windows, featuring tables and wicker chairs.

20. LAPRIMA Hotel Flores

1.3 km from Labuan Bajo Port

Reny

￥7,650

￥9,475 total

includes taxes & fees

Oct 23 - Oct 24

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Compare popular hotels close to Labuan Bajo Port

Property	Star rating	Guest rating
TA’AKTANA, a Luxury Collection Resort & Spa, Labuan Bajo	10.0 Exceptional 34 reviews	View
AYANA Komodo Waecicu Beach	9.6 Exceptional 132 reviews	View
Katamaran Hotel & Resort Komodo	9.4 Exceptional 110 reviews	View
Meruorah Komodo Labuan Bajo	9.0 Wonderful 234 reviews	View
Seaesta Komodo Hotel & Hostel	9.2 Wonderful 117 reviews	View

Top Labuan Bajo Port Hotel Reviews

Katamaran Hotel & Resort Komodo

10/10 Excellent

"Really lovely staff, great location, beautiful views and amenities!"

Pavilla Labuan Bajo

10/10 Excellent

"Very friendly staff"

Harbour Komodo Hotel

10/10 Excellent

"The hotel is excellently located by the harbour. The staff were very good and the bed comfortable. The aircon worked well and the shower had great water pressure."

Seaesta Komodo Hotel & Hostel

10/10 Excellent

"amazing stay, friendly staff, beautiful food, very social hostel."

ZASGO HOTEL

10/10 Excellent

"Felt more like a resort than a hotel. Great facilities and staff. Stayed here for two nights and would do so again. Grocery store in the basement, fried chicken place in the lobby, and restaurant and pool bar in the hotel were all great to have nearby."

AYANA Komodo Waecicu Beach

8/10 Good

"Really amazing property! Gorgeous and the staff are so attentive and helpful. The jetty was so perfect for Sunny days - can jump into the water and it’s perfect. There’s a bar at the end that will keep you hydrated. Every spot in the hotel was ideal for watching the sunset. Amenities were great, the only reason for 4 stars is that so many of them were behind a “paywall.” When you’re paying this much per night, you would hope that snorkel gear is provided free of charge at the least! With that said, they had a nice yoga/stretching class for free and a well maintained gym."

Flamingo Avia Labuan Bajo

8/10 Good

"This is a good option for an overnight stay before you get on the boat tour - no other reason to book it besides that. It’s very basic but its location makes it exceptionally convenient to the harbor. They need to provide small hand towels as well and it’s not quiet at night."

La Colina Komodo Hotel

8/10 Good

"Nice view. The rooms are very simple and comfortable for a short stay but not more. Helpful staff to get your luggage up the hill and stairs."

OhJulia Hotel Komodo

10/10 Excellent

"I stayed here with my son last week. The hotel is in a perfect location, right in town close to great places for dinner and tour bookings. The hotel is very clean and neat with an incredible view of the harbour from the pool area. The hotel staff are SO lovely and helpful. We had to order breakfast online each day and indicate the time. They do make up breakfast boxes if you have an early tour, we had a small mishap with this so double check your order at reception the night before. Room was terrific, on the smaller side but nice and clean with small balcony. WhatsApp is a good way to communicate with reception as there isn’t a phone in the room. Great air conditioning. A number of steps up the front of the hotel, but porter always on hand to help with bags. Overall we loved the place and if we returned we’d stay here again. Try the Italian restaurant next door👌Our photos won’t upload, but the place has a light and airy feel with natural tones and Italian vibes."

Other attractions near Labuan Bajo Port

Waecicu Beach

8.2/10 (19 reviews)

Why not spend a carefree afternoon at Waecicu Beach during your travels in Labuan Bajo? Wander the gardens or discover the area's sunsets.

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Plaza Marina Labuan Bajo

You can do some window-shopping at Plaza Marina Labuan Bajo during your visit to Labuan Bajo. Stroll along the beaches or discover the area's sunsets.

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Pede Labuan Beach

8.2/10 (19 reviews)

If a restful vacation is part of your travel plans, Pede Labuan Beach might be the perfect place to seek out during your trip to Labuan Bajo. Wander the gardens or discover the area's sunsets.

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Batu Cermin Cave

8.6/10 (23 reviews)

Explore the great outdoors at Batu Cermin Cave, a lovely green space in Labuan Bajo. Wander the beaches and gardens in the area.

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Sylvia Hill

8.8/10 (3 reviews)

Commune with nature and explore the great outdoors at Sylvia Hill during your travels in Labuan Bajo. Stroll along the beaches or discover the area's sunsets.

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Frequently asked questions

What's the area like around Labuan Bajo Port?

Labuan Bajo Port is located in an area of Labuan Bajo that travelers like for its island views, beaches, and sunsets. If you're looking for a convenient place to stay, check out the 101 hotels and other accommodations you'll find within a mile.

What's the best place to stay near Labuan Bajo Port?

Adjacent to Labuan Bajo Port, Meruorah Komodo Labuan Bajo is one of the top choices for your stay based on our traveler data, and this hotel offers a marina and a full-service spa. Other good options within a short distance include Harbour Komodo Hotel and ZASGO HOTEL.

How many hotels will I be able to find near Labuan Bajo Port?

Expedia has 101 hotels and other accommodations within a mile from Labuan Bajo Port.

If I need to cancel the hotel reservation for my stay near Labuan Bajo Port, will I receive a refund?

Yes! The majority of hotel room reservations are fully refundable if you cancel prior to the accommodation's cancellation deadline, which is usually within 24-48 hours of your check-in date. If your reservation is non-refundable, you might be able to cancel it and receive a refund within a 24-hour period of your booking. Put your dates in and click on "Search", then you can filter by "fully refundable" to get the best deals available near Labuan Bajo Port.

Where can I learn more about changing or cancelling my trip in the area near Labuan Bajo Port?

For more details about changing or cancelling your stay near Labuan Bajo Port, go to https://www.expedia.com/service/.

What can I see and do near Labuan Bajo Port?

Lounge by the water at Pede Labuan Beach and Waecicu Beach. Explore nature at Batu Cermin Cave and Sylvia Hill. Rangko Cave is also located 7.3 mi (11.7 km) from Labuan Bajo Port, and Cunca Wulang Waterfall is 8.8 mi (14.2 km) away.

Find hotels near Labuan Bajo Port, Labuan Bajo from ￥2,190

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Treat yourself

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Our top choices for Labuan Bajo Port hotels

1. TA’AKTANA, a Luxury Collection Resort & Spa, Labuan Bajo

2. AYANA Komodo Waecicu Beach

3. Katamaran Hotel & Resort Komodo

4. Meruorah Komodo Labuan Bajo

5. Seaesta Komodo Hotel & Hostel

6. Komodo Suites Downtown

7. Harbour Komodo Hotel

8. Palulu Garden Homestay

9. Centro Bajo Hotel

10. ZASGO HOTEL

11. OhJulia Hotel Komodo

12. World BnB

13. Flamingo Ceria

14. Hotel Bonne Nuit

15. Pavilla Labuan Bajo

16. Komodo Boutique Hotel

17. Crowne Plaza Labuan Bajo by IHG

18. Bintang Flores Hotel

19. Komodo Lodge

20. LAPRIMA Hotel Flores

Compare popular hotels close to Labuan Bajo Port

Top Labuan Bajo Port Hotel Reviews

Katamaran Hotel & Resort Komodo

Pavilla Labuan Bajo

Harbour Komodo Hotel

Seaesta Komodo Hotel & Hostel

ZASGO HOTEL

AYANA Komodo Waecicu Beach

Flamingo Avia Labuan Bajo

La Colina Komodo Hotel

OhJulia Hotel Komodo

Other attractions near Labuan Bajo Port

Waecicu Beach

Plaza Marina Labuan Bajo

Pede Labuan Beach

Batu Cermin Cave

Sylvia Hill

Frequently asked questions