Top 10 Hotels in Harpers Ferry, IA from ￥10,285 - Competitive Prices

A river surrounded by dense green forest and hills in the background.

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Waterpark

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Our top choices for Harpers Ferry hotels

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Pool

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1. Northwood Inn Prairie Du Chien

Southside

Dee

￥9,224

￥10,285 total

includes taxes & fees

Aug 23 - Aug 24

Standard Room, 2 Queen Beds, River View | Premium bedding, down comforters, pillowtop beds, laptop workspace

2. Waterfront Hotel

Prairie Du Chien

Moss

￥19,825

￥22,107 total

includes taxes & fees

Aug 9 - Aug 10

Comfort Studio Suite, 2 Queen Beds, Kitchenette | Desk, laptop workspace, iron/ironing board, WiFi (free)

3. Windsor Place Inn

Southside

Dawn

￥11,746

￥12,979 total

includes taxes & fees

Aug 16 - Aug 17

Studio Suite, 1 King Bed, Non Smoking | Premium bedding, desk, laptop workspace, blackout drapes

4. AmericInn by Wyndham Prairie du Chien

Prairie Du Chien

Corinne

￥11,988

￥13,246 total

includes taxes & fees

Aug 16 - Aug 17

In-room safe, desk, blackout drapes, iron/ironing board

5. Country Inn & Suites by Radisson, Prairie du Chien

Prairie Du Chien

Daniel

￥16,650

￥18,565 total

includes taxes & fees

Aug 27 - Aug 28

Studio Suite, 1 Queen Bed, Non Smoking | Desk, laptop workspace, blackout drapes, WiFi (surcharge)

Indoor pool, a heated pool, open 7:00 AM to 11:00 PM, sun loungers

6. Microtel Inn & Suites by Wyndham Prairie du Chien

Southside

denise

￥13,042

￥14,541 total

includes taxes & fees

Aug 9 - Aug 10

Deluxe Room | Living area | 50-inch flat-screen TV with digital channels, streaming services

Deluxe Room | Bathroom | Towels, soap, shampoo, toilet paper

7. Prairie Voyager

Southside

Jeff

￥12,693

￥14,154 total

includes taxes & fees

Aug 16 - Aug 17

8. Scenic Valley Motel

Lansing

Michael

￥12,158

￥16,769 total

includes taxes & fees

Aug 10 - Aug 11

Standard Room, 2 Queen Beds, Non Smoking | Egyptian cotton sheets, premium bedding, pillowtop beds, desk

9. Comfort Inn & Suites Marquette - Prairie du Chien

Marquette

Melissa

￥11,552

￥12,938 total

includes taxes & fees

Sep 3 - Sep 4

The Pine Lodge | Premium bedding, Tempur-Pedic beds, iron/ironing board (on request)

10. Trickling Waters Retreat

Marquette

Roger

￥15,609

￥17,482 total

includes taxes & fees

Aug 19 - Aug 20

11. Boarders Inn & Suites by Cobblestone Hotels – Waukon

Waukon

James

￥13,191

￥14,773 total

includes taxes & fees

Aug 24 - Aug 25

Suite, 1 Queen Bed, Non Smoking | Desk, blackout drapes, iron/ironing board, WiFi (free)

Indoor pool, open 7 AM to 10 PM, sun loungers

12. Quality Inn & Suites Prairie Du Chien

Southside

James

￥11,106

￥12,271 total

includes taxes & fees

Sep 7 - Sep 8

Business Studio Suite | WiFi (free), bed sheets

13. Sportsmen Motel

Dorchester

Janette

￥9,629

￥14,316 total

includes taxes & fees

Aug 29 - Aug 30

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Stay near popular Harpers Ferry attractions

Yellow River State Forest

9.4/10 (72 reviews)

Nestled in Iowa's Driftless Area, Yellow River State Forest offers 25 miles of trails through dramatic ridges and dense woodlands. Enjoy primitive camping and trout fishing in this serene 8,500-acre wilderness retreat.

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Waukon Junction Wildlife Area

You can take time to visit Waukon Junction Wildlife Area during your travels to Harpers Ferry. While you're in the area, wander around the parks.

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Harpers Ferry City Library

This community library ranks thirteenth nationally among similar-sized towns. Browse the diverse collection, attend a craft fair, or utilize the free public computers in this welcoming local hub.

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Mud Hen Lake

Commune with nature and explore the great outdoors at Mud Hen Lake during your travels in Harpers Ferry. While you're in the area, wander around the parks.

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Harpers Ferry City Park

Explore the great outdoors at Harpers Ferry City Park, a lovely green space in Harpers Ferry. While you're in the area, wander around the parks.

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Mud Hen Lake Wildlife Management Area

This tranquil wetland habitat offers prime fishing for channel catfish and northern pike in a serene setting. Bring supplies and appropriate footwear as amenities are minimal in this unspoiled natural environment.

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Bluffview Park

Explore the great outdoors at Bluffview Park, a lovely green space in Harpers Ferry. While you're in the area, wander around the parks.

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Rittenhouse Lake

Commune with nature and explore the great outdoors at Rittenhouse Lake during your travels in Harpers Ferry. While you're in the area, wander around the parks.

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Learn more about Harpers Ferry

Nestled along the Mississippi River, this charming town invites visitors to paddle through Butters Lake or spot wildlife at Waukon Junction Wildlife Area. Hike among ancient Native American burial mounds at Effigy Mounds National Monument or explore the forested trails of Yellow River State Forest.

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A river with a dam, surrounded by greenery and a clear sky.

Top Harpers Ferry Hotel Reviews

Cozy 2-Bedroom River Town Retreat – Sleeps 6-8 - Walking distance to the River

10/10 Excellent

"Perfect place to relax and enjoy the town after a good days fishing"

Comfort Inn & Suites Marquette - Prairie du Chien

10/10 Excellent

"Staff were especially polite and helpful. The hotel was near natural areas and shops we were interested in seeing. Parking lot was small, with limited spaces for parking and maneuvering the car."

Romantic Get-a-Way!! 1954 Rail Road Caboose!! Relaxing Hot Tub!

10/10 Excellent

"This property is an absolute delight! John was an amazing host - great communication and responsiveness. Made us feel so welcome. The caboose is adorable perfection. The hot tub was such a great amenity. Don't hesitate to book this listing - you will not be disappointed!"

Northwood Inn Prairie Du Chien

10/10 Excellent

"Excellent value. Great staff."

Boarders Inn & Suites by Cobblestone Hotels – Waukon

10/10 Excellent

"Already wrote a review. Would stay again"

Quality Inn & Suites Prairie Du Chien

8/10 Good

"The staff was great the pool area could have been cleaner"

Trickling Waters Retreat

10/10 Excellent

"Really enjoyed the place. Nice deck to enjoy the property"

Newer, spacious and clean cottage with river view!

10/10 Excellent

"Beautiful cottage. Very clean and had everything we needed. Not sure you could find a nicer place in Harpers."

Log Cabin next to the Mississippi River

8/10 Good

"Nice and Cozy, location on main road made it easy for trips to Prairie Du Chien, Lansing, and McGregor."

More cheap stays in Harpers Ferry

Northwood Inn Prairie Du Chien

1930 S Marquette Rd Prairie Du Chien WI

￥9,224

￥10,285 total

Aug 23 - Aug 24

includes taxes & fees

8.4/10 Very Good! (158 reviews)

Quality Inn & Suites Prairie Du Chien

37268 US Highway 18 Prairie Du Chien WI

￥11,106

￥12,271 total

Sep 7 - Sep 8

includes taxes & fees

8.2/10 Very Good! (480 reviews)

Comfort Inn & Suites Marquette - Prairie du Chien

100 North Street Marquette IA

￥11,552

￥12,938 total

Sep 3 - Sep 4

includes taxes & fees

8.8/10 Excellent! (1,003 reviews)

Windsor Place Inn

1936 Marquette Road South Prairie Du Chien WI

￥11,746

￥12,979 total

Aug 16 - Aug 17

includes taxes & fees

Microtel Inn & Suites by Wyndham Prairie du Chien

1833 S Marquette Road Prairie Du Chien WI

￥13,042

￥14,541 total

Aug 9 - Aug 10

includes taxes & fees

Scenic Valley Motel

1608 Main St Lansing IA

￥12,158

￥16,769 total

Aug 10 - Aug 11

includes taxes & fees

8.2/10 Very Good! (135 reviews)

Frequently asked questions

What's the best place for a stay in Harpers Ferry?

Located 10.3 mi (16.6 km) from the heart of Harpers Ferry, Waterfront Hotel is a top choice for your stay based on our traveler data. Two other options for your visit to the area are Quality Inn & Suites Prairie Du Chien and Windsor Place Inn. See all available top hotels, or vacation rentals in Harpers Ferry.

What are some of the best vacation rentals that Harpers Ferry has to offer?

Upper Place Vacation Cottage: This vacation home rental outside of Harpers Ferry is located in a rural location and has a fireplace, a patio, and a barbecue grill to put you at ease in your new surroundings. Kitchen amenities include a fridge, a stovetop, and a microwave. Make the most of the garden in this rental home to help you unwind. See all vacation rentals in Harpers Ferry.

If I need to cancel my hotel reservation in Harpers Ferry, will I receive a refund?

Yes, the majority of hotel reservations are fully refundable if cancelled prior to the hotel's cancellation deadline, which is usually within 24-48 hours of your scheduled arrival. If you have a non-refundable reservation, it might still be possible to cancel it and get a refund within 24 hours of your booking. Filter your search by fully refundable to find flexible hotel deals in Harpers Ferry.

Where can I learn more about changing or cancelling my trip to Harpers Ferry?

To find more details about updating your trip to Harpers Ferry or cancelling it, go to https://www.expedia.com/service/.

What's the best hotel to stay close to Effigy Mounds National Monument?

Country Inn & Suites by Radisson, Prairie du Chien, WI is one of the top choices for your stay based on our traveler data, and this 3-star hotel offers free breakfast and a restaurant. It's located 2.7 mi (4.3 km) from Effigy Mounds National Monument. Other good options within a few miles include Waterfront Hotel and Cobblestone Inn & Suites - Marquette/Prairie du Chien.

What about the best place to stay close to Yellow River State Forest?

One of the top choices for your stay is Country Inn & Suites by Radisson, Prairie du Chien, WI, located 8.6 mi (13.9 km) from Yellow River State Forest, and this 3-star hotel offers free breakfast and a restaurant. Waterfront Hotel and Cobblestone Inn & Suites - Marquette/Prairie du Chien are a couple of other good options within the surrounding area.

What are some accommodations with pools in Harpers Ferry?

Quality Inn & Suites Prairie Du Chien: Offers full, an indoor pool, and free self parking. Black Bear A-Frame Waterfront Log Cabin with Hot Tub Jacuzzi and Wexford Hollow 6 BR Cabin with Swimming Pool & Hot Tub are a couple of other choices that offer an onsite pool. View all hotels with pools in Harpers Ferry.

What's the best accommodation near La Crosse Municipal Airport (LSE)?

Country Inn & Suites by Radisson, La Crosse, WI is a popular hotel, featuring free breakfast and an indoor pool. It's located a short 1.7 mi (2.8 km) from La Crosse Municipal Airport. Other options near the airport are AmericInn by Wyndham La Crosse Riverfront-Conference Center and Motel 6 La Crosse, WI.

What is staying in Harpers Ferry like?

Visitors can enjoy all that Harpers Ferry has to offer including the restaurants and parks. In Harpers Ferry, there are 21 hotels and other accommodations to choose from. Find out more about Harpers Ferry.

What is there to see in Harpers Ferry?

Natural beauty is on display at Yellow River State Forest, Mississippi River, and Bluffview Park. A couple of additional sights to add to your agenda are Effigy Mounds National Monument and Harpers Ferry City Library. Check out what more to see and do in Expedia's Harpers Ferry guide.

What's the weather like in Harpers Ferry?

The hottest months are usually July and August with an average temp of 69°F, while the coldest months are January and February with an average of 25°F. The snowiest months in Harpers Ferry are January, March, April, and December, with each month seeing an average of 7 inches of snowfall.

Find hotels in Harpers Ferry, IA from ￥10,285

Change your mind

Treat yourself

Be picky

Go beyond your typical stay in Harpers Ferry

Check prices for these dates

Filter by

Property class

Guest rating

Our top choices for Harpers Ferry hotels

1. Northwood Inn Prairie Du Chien

2. Waterfront Hotel

3. Windsor Place Inn

4. AmericInn by Wyndham Prairie du Chien

5. Country Inn & Suites by Radisson, Prairie du Chien

6. Microtel Inn & Suites by Wyndham Prairie du Chien

7. Prairie Voyager

8. Scenic Valley Motel

9. Comfort Inn & Suites Marquette - Prairie du Chien

10. Trickling Waters Retreat

11. Boarders Inn & Suites by Cobblestone Hotels – Waukon

12. Quality Inn & Suites Prairie Du Chien

13. Sportsmen Motel

Stay near popular Harpers Ferry attractions

Yellow River State Forest

Waukon Junction Wildlife Area

Harpers Ferry City Library

Mud Hen Lake

Harpers Ferry City Park

Mud Hen Lake Wildlife Management Area

Bluffview Park

Rittenhouse Lake

Learn more about Harpers Ferry

Top Harpers Ferry Hotel Reviews

Cozy 2-Bedroom River Town Retreat – Sleeps 6-8 - Walking distance to the River

Comfort Inn & Suites Marquette - Prairie du Chien

Romantic Get-a-Way!! 1954 Rail Road Caboose!! Relaxing Hot Tub!

Northwood Inn Prairie Du Chien

Boarders Inn & Suites by Cobblestone Hotels – Waukon

Quality Inn & Suites Prairie Du Chien

Trickling Waters Retreat

Newer, spacious and clean cottage with river view!

Log Cabin next to the Mississippi River

More cheap stays in Harpers Ferry

Northwood Inn Prairie Du Chien

Quality Inn & Suites Prairie Du Chien

Comfort Inn & Suites Marquette - Prairie du Chien

Windsor Place Inn

Microtel Inn & Suites by Wyndham Prairie du Chien

Scenic Valley Motel

Frequently asked questions

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