Top 10 Hotels in Harpers Ferry, IA from ￥10,387 - Competitive Prices

A river surrounded by dense green forest and hills in the background.

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Our top choices for Harpers Ferry hotels

Comfort Studio Suite, 2 Queen Beds, Kitchenette | Desk, laptop workspace, iron/ironing board, WiFi (free)

1. Windsor Place Inn

Southside

Dawn

￥11,864

￥13,109 total

includes taxes & fees

Aug 16 - Aug 17

2. Northwood Inn Prairie Du Chien

Southside

Dee

￥9,315

￥10,387 total

includes taxes & fees

Aug 16 - Aug 17

Studio Suite, 1 King Bed, Non Smoking | Premium bedding, desk, laptop workspace, blackout drapes

3. AmericInn by Wyndham Prairie du Chien

Prairie Du Chien

Corinne

￥12,756

￥14,097 total

includes taxes & fees

Aug 13 - Aug 14

In-room safe, desk, blackout drapes, iron/ironing board

4. Country Inn & Suites by Radisson, Prairie du Chien

Prairie Du Chien

Daniel

￥16,817

￥18,751 total

includes taxes & fees

Sep 1 - Sep 2

Standard Room, 2 Queen Beds, River View | Premium bedding, down comforters, pillowtop beds, laptop workspace

5. Waterfront Hotel

Prairie Du Chien

Moss

￥21,355

￥23,812 total

includes taxes & fees

Aug 25 - Aug 26

Deluxe Room | Living area | 50-inch flat-screen TV with digital channels, streaming services

Deluxe Room | Bathroom | Towels, soap, shampoo, toilet paper

Deluxe Room | Laptop workspace, iron/ironing board (on request), WiFi, bed sheets

6. Prairie Voyager

Southside

Jeff

￥12,756

￥14,224 total

includes taxes & fees

Aug 16 - Aug 17

Suite, 1 Queen Bed, Non Smoking | Desk, blackout drapes, iron/ironing board, WiFi (free)

Indoor pool, open 7 AM to 10 PM, sun loungers

7. Quality Inn & Suites Prairie Du Chien

Southside

James

￥11,953

￥13,208 total

includes taxes & fees

Aug 16 - Aug 17

Studio Suite, 1 Queen Bed, Non Smoking | Desk, laptop workspace, blackout drapes, WiFi (surcharge)

Indoor pool, a heated pool, open 7:00 AM to 11:00 PM, sun loungers

8. Microtel Inn & Suites by Wyndham Prairie du Chien

Southside

denise

￥13,313

￥14,845 total

includes taxes & fees

Aug 16 - Aug 17

Standard Room, 2 Queen Beds, Non Smoking | Egyptian cotton sheets, premium bedding, pillowtop beds, desk

9. Comfort Inn & Suites Marquette - Prairie du Chien

Marquette

Melissa

￥11,611

￥13,004 total

includes taxes & fees

Sep 2 - Sep 3

10. Scenic Valley Motel

Lansing

Michael

￥12,158

￥16,802 total

includes taxes & fees

Aug 26 - Aug 27

Desk, laptop workspace, blackout drapes, iron/ironing board

11. Boarders Inn & Suites by Cobblestone Hotels – Waukon

Waukon

James

￥13,323

￥14,922 total

includes taxes & fees

Aug 20 - Aug 21

The Pine Lodge | Premium bedding, Tempur-Pedic beds, iron/ironing board (on request)

12. Trickling Waters Retreat

Marquette

Roger

￥14,173

￥15,874 total

includes taxes & fees

Aug 16 - Aug 17

Business Studio Suite | WiFi (free), bed sheets

13. Sportsmen Motel

Dorchester

Janette

￥9,828

￥14,575 total

includes taxes & fees

Aug 20 - Aug 21

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Stay near popular Harpers Ferry attractions

Yellow River State Forest

9.4/10 (72 reviews)

Nestled in Iowa's Driftless Area, Yellow River State Forest offers 25 miles of trails through dramatic ridges and dense woodlands. Enjoy primitive camping and trout fishing in this serene 8,500-acre wilderness retreat.

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Waukon Junction Wildlife Area

You can take time to visit Waukon Junction Wildlife Area during your travels to Harpers Ferry. While you're in the area, wander around the parks.

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Harpers Ferry City Library

This community library ranks thirteenth nationally among similar-sized towns. Browse the diverse collection, attend a craft fair, or utilize the free public computers in this welcoming local hub.

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Mud Hen Lake

Commune with nature and explore the great outdoors at Mud Hen Lake during your travels in Harpers Ferry. While you're in the area, wander around the parks.

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Harpers Ferry City Park

Explore the great outdoors at Harpers Ferry City Park, a lovely green space in Harpers Ferry. While you're in the area, wander around the parks.

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Bluffview Park

Explore the great outdoors at Bluffview Park, a lovely green space in Harpers Ferry. While you're in the area, wander around the parks.

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Noble's Island

Commune with nature and explore the great outdoors at Noble's Island during your travels in Harpers Ferry. While you're in the area, wander around the parks.

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Mud Hen Lake Wildlife Management Area

This tranquil wetland habitat offers prime fishing for channel catfish and northern pike in a serene setting. Bring supplies and appropriate footwear as amenities are minimal in this unspoiled natural environment.

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Learn more about Harpers Ferry

Nestled along the Mississippi River, this charming town invites visitors to paddle through Butters Lake or spot wildlife at Waukon Junction Wildlife Area. Hike among ancient Native American burial mounds at Effigy Mounds National Monument or explore the forested trails of Yellow River State Forest.

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A river with a dam, surrounded by greenery and a clear sky.

Top Harpers Ferry Hotel Reviews

Comfort Inn & Suites Marquette - Prairie du Chien

10/10 Excellent

"Parking is very limited except for on the street"

AmericInn by Wyndham Prairie du Chien

8/10 Good

"Nice spacious room and very clean. Good hot breakfast."

Romantic Get-a-Way!! 1954 Rail Road Caboose!! Relaxing Hot Tub!

10/10 Excellent

"Excellent on all accounts!"

Cozy 2-Bedroom River Town Retreat – Sleeps 6-8 - Walking distance to the River

10/10 Excellent

"Perfect place to relax and enjoy the town after a good days fishing"

Boarders Inn & Suites by Cobblestone Hotels – Waukon

10/10 Excellent

"Already wrote a review. Would stay again"

Trickling Waters Retreat

10/10 Excellent

"Really enjoyed the place. Nice deck to enjoy the property"

Black Bear A-Frame Waterfront Log Cabin with Hot Tub Jacuzzi

8/10 Good

"It was as described. Bring your own shampoo, paper towels, dish towels and a coffee pot bigger than 5 cups, if you wish, in addition to bedding and towels,which were required."

Log Cabin next to the Mississippi River

8/10 Good

"Nice and Cozy, location on main road made it easy for trips to Prairie Du Chien, Lansing, and McGregor."

Timber Ridge Lodge -HOT TUB- POOL

8/10 Good

"We were comfortable and enjoyed our time here, especially in the pool. The house was clean enough but could use a deep clean and maintenance to meet it's potential."

More cheap stays in Harpers Ferry

Northwood Inn Prairie Du Chien

1930 S Marquette Rd Prairie Du Chien WI

￥9,315

￥10,387 total

Aug 16 - Aug 17

includes taxes & fees

Comfort Inn & Suites Marquette - Prairie du Chien

100 North Street Marquette IA

￥11,611

￥13,004 total

Sep 2 - Sep 3

includes taxes & fees

8.8/10 Excellent! (1,008 reviews)

Windsor Place Inn

1936 Marquette Road South Prairie Du Chien WI

￥11,864

￥13,109 total

Aug 16 - Aug 17

includes taxes & fees

Quality Inn & Suites Prairie Du Chien

37268 US Highway 18 Prairie Du Chien WI

￥11,953

￥13,208 total

Aug 16 - Aug 17

includes taxes & fees

Microtel Inn & Suites by Wyndham Prairie du Chien

1833 S Marquette Road Prairie Du Chien WI

￥13,313

￥14,845 total

Aug 16 - Aug 17

includes taxes & fees

Scenic Valley Motel

1608 Main St Lansing IA

￥12,158

￥16,802 total

Aug 26 - Aug 27

includes taxes & fees

8.2/10 Very Good! (137 reviews)

Frequently asked questions

What's the best place for a stay in Harpers Ferry?

Located 10.3 mi (16.6 km) from the heart of Harpers Ferry, Waterfront Hotel is a top choice for your stay based on our traveler data. Two other options for your visit to the area are Quality Inn & Suites Prairie Du Chien and Windsor Place Inn. See all available top hotels, or vacation rentals in Harpers Ferry.

What are some of the best vacation rentals that Harpers Ferry has to offer?

Upper Place Vacation Cottage: This vacation home rental outside of Harpers Ferry is located in a rural location and has a fireplace, a patio, and a barbecue grill to put you at ease in your new surroundings. Kitchen amenities include a fridge, a stovetop, and a microwave. Make the most of the garden in this rental home to help you unwind. See all vacation rentals in Harpers Ferry.

If I need to cancel my hotel reservation in Harpers Ferry, will I receive a refund?

Yes, the majority of hotel reservations are fully refundable if cancelled prior to the hotel's cancellation deadline, which is usually within 24-48 hours of your scheduled arrival. If you have a non-refundable reservation, it might still be possible to cancel it and get a refund within 24 hours of your booking. Filter your search by fully refundable to find flexible hotel deals in Harpers Ferry.

Where can I learn more about changing or cancelling my trip to Harpers Ferry?

To find more details about updating your trip to Harpers Ferry or cancelling it, go to https://www.expedia.com/service/.

What's the best hotel to stay close to Effigy Mounds National Monument?

Country Inn & Suites by Radisson, Prairie du Chien, WI is one of the top choices for your stay based on our traveler data, and this 3-star hotel offers free breakfast and a restaurant. It's located 2.7 mi (4.3 km) from Effigy Mounds National Monument. Other good options within a few miles include Waterfront Hotel and Cobblestone Inn & Suites - Marquette/Prairie du Chien.

What about the best place to stay close to Yellow River State Forest?

One of the top choices for your stay is Country Inn & Suites by Radisson, Prairie du Chien, WI, located 8.6 mi (13.9 km) from Yellow River State Forest, and this 3-star hotel offers free breakfast and a restaurant. Waterfront Hotel and Cobblestone Inn & Suites - Marquette/Prairie du Chien are a couple of other good options within the surrounding area.

What are some accommodations with pools in Harpers Ferry?

Quality Inn & Suites Prairie Du Chien: Offers full, an indoor pool, and free self parking. Black Bear A-Frame Waterfront Log Cabin with Hot Tub Jacuzzi and Wexford Hollow 6 BR Cabin with Swimming Pool & Hot Tub are a couple of other choices that offer an onsite pool. View all hotels with pools in Harpers Ferry.

What's the best accommodation near La Crosse Municipal Airport (LSE)?

Country Inn & Suites by Radisson, La Crosse, WI is a popular hotel, featuring free breakfast and an indoor pool. It's located a short 1.7 mi (2.8 km) from La Crosse Municipal Airport. Other options near the airport are AmericInn by Wyndham La Crosse Riverfront-Conference Center and Motel 6 La Crosse, WI.

What is staying in Harpers Ferry like?

Visitors can enjoy all that Harpers Ferry has to offer including the restaurants and parks. In Harpers Ferry, there are 21 hotels and other accommodations to choose from. Find out more about Harpers Ferry.

What is there to see in Harpers Ferry?

Natural beauty is on display at Yellow River State Forest, Mississippi River, and Bluffview Park. A couple of additional sights to add to your agenda are Effigy Mounds National Monument and Harpers Ferry City Library. Check out what more to see and do in Expedia's Harpers Ferry guide.

What's the weather like in Harpers Ferry?

The hottest months are usually July and August with an average temp of 69°F, while the coldest months are January and February with an average of 25°F. The snowiest months in Harpers Ferry are January, March, April, and December, with each month seeing an average of 7 inches of snowfall.

Find hotels in Harpers Ferry, IA from ￥10,387

Change your mind

Treat yourself

Be picky

Go beyond your typical stay in Harpers Ferry

Check prices for these dates

Filter by

Property class

Guest rating

Our top choices for Harpers Ferry hotels

1. Windsor Place Inn

2. Northwood Inn Prairie Du Chien

3. AmericInn by Wyndham Prairie du Chien

4. Country Inn & Suites by Radisson, Prairie du Chien

5. Waterfront Hotel

6. Prairie Voyager

7. Quality Inn & Suites Prairie Du Chien

8. Microtel Inn & Suites by Wyndham Prairie du Chien

9. Comfort Inn & Suites Marquette - Prairie du Chien

10. Scenic Valley Motel

11. Boarders Inn & Suites by Cobblestone Hotels – Waukon

12. Trickling Waters Retreat

13. Sportsmen Motel

Stay near popular Harpers Ferry attractions

Yellow River State Forest

Waukon Junction Wildlife Area

Harpers Ferry City Library

Mud Hen Lake

Harpers Ferry City Park

Bluffview Park

Noble's Island

Mud Hen Lake Wildlife Management Area

Learn more about Harpers Ferry

Top Harpers Ferry Hotel Reviews

Comfort Inn & Suites Marquette - Prairie du Chien

AmericInn by Wyndham Prairie du Chien

Romantic Get-a-Way!! 1954 Rail Road Caboose!! Relaxing Hot Tub!

Cozy 2-Bedroom River Town Retreat – Sleeps 6-8 - Walking distance to the River

Boarders Inn & Suites by Cobblestone Hotels – Waukon

Trickling Waters Retreat

Black Bear A-Frame Waterfront Log Cabin with Hot Tub Jacuzzi

Log Cabin next to the Mississippi River

Timber Ridge Lodge -HOT TUB- POOL

More cheap stays in Harpers Ferry

Northwood Inn Prairie Du Chien

Comfort Inn & Suites Marquette - Prairie du Chien

Windsor Place Inn

Quality Inn & Suites Prairie Du Chien

Microtel Inn & Suites by Wyndham Prairie du Chien

Scenic Valley Motel

Frequently asked questions

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