The Best Hotels Closest to Labuan Bajo Port in Labuan Bajo for 2026

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Our top choices for Labuan Bajo Port hotels

A waterfront resort with a curved building, outdoor seating, and a view of a distant island.

A wooden deck with seating and a bar area, overlooking a body of water with overwater bungalows in the background.

A modern hotel room with a large window offering a view of a body of water and a distant island. There is a seating area with a sofa and armchairs, and a small table with a decorative item.

A resort with a swimming pool, beach, and overwater bungalows.

1. TA’AKTANA, a Luxury Collection Resort & Spa, Labuan Bajo

2.2 km from Labuan Bajo Port

Iliana

￥171,436

￥207,438 total

includes taxes & fees

Sep 1 - Sep 2

A balcony with wicker chairs and a table, overlooking a turquoise sea with boats and a pier.

An aerial view of a small island with clear turquoise waters, a sandy beach, and a few boats.

A pool with clear blue water, palm trees, and a distant view of a pier and mountains.

A hotel room with a bed, a desk, a chair, a table with fruits, and a view of a mountain and water.

2. AYANA Komodo Waecicu Beach

2.8 km from Labuan Bajo Port

Sophie

￥29,469

￥35,953 total

includes taxes & fees

Sep 1 - Sep 2

A resort with overwater bungalows connected by walkways, surrounded by clear turquoise water and lush green hills.

A modern restaurant with a view of the sea, featuring wooden tables and chairs, large windows, and a contemporary ceiling design.

A sunlit infinity pool with lounge chairs and umbrellas, overlooking a body of water and a distant island.

A spacious lobby with a modern design, featuring a large seating area, wooden accents, and large windows offering a view of the sea.

3. Katamaran Hotel & Resort Komodo

2.4 km from Labuan Bajo Port

Salvatore

￥27,668

￥33,479 total

includes taxes & fees

Sep 18 - Sep 19

A modern hotel with a pool area, lounge chairs, and umbrellas.

A spacious lobby with a modern design, featuring a large seating area, a dining space, and a view of the outdoors.

A coastal landscape with a clear beach, boats, and mountainous terrain.

A modern outdoor dining area with a bar and seating arrangements.

4. Crowne Plaza Labuan Bajo by IHG

1.5 km from Labuan Bajo Port

nicole

￥26,490

￥32,053 total

includes taxes & fees

Sep 12 - Sep 13

A coastal landscape with a small island, clear waters, and distant mountains.

A couple seated at a table with a view of boats on a body of water, surrounded by flowers and candles.

A poolside area with lounge chairs and a view of a harbor with boats.

A spacious lobby with wicker furniture, a bar area, and a sign for Meruora Hotel.

5. Meruorah Komodo Labuan Bajo

0.3 km from Labuan Bajo Port

Constance

￥18,495

￥22,838 total

includes taxes & fees

Sep 13 - Sep 14

A poolside area with lounge chairs and a view of the sea and boats.

A modern hotel room with a large bed, a wooden headboard, a seating area with a table and chairs, and a bathroom with a mirror and sink.

A wooden bench with cushions, a hanging light fixture, and a view of a coastal town.

A room with a wooden wardrobe, a desk with a chair, a mirror, and a television.

6. OhJulia Hotel Komodo

0.2 km from Labuan Bajo Port

Kizzy

￥12,605

￥15,451 total

includes taxes & fees

Sep 18 - Sep 19

A coastal landscape with clear turquoise waters, a sandy beach, and boats in the distance.

A sign for a bed and breakfast named "WORLD B&B" with a pathway leading to the building surrounded by tropical plants.

A swimming pool with lounge chairs and umbrellas, surrounded by greenery and a small building.

A wooden deck with a thatched roof, a small outdoor seating area, and a pathway leading to a door.

7. World BnB

2.3 km from Labuan Bajo Port

Lesley

￥4,206

￥5,090 total

includes taxes & fees

Sep 21 - Sep 22

A stone pathway surrounded by lush greenery and various tropical plants.

A restaurant with a staircase leading to a garden, outdoor seating, and a tiled floor.

A hotel room with a bed, a desk, a chair, a window with curtains, and a door.

A wooden bridge with a red floor, supported by bamboo poles, surrounded by lush greenery.

8. Centro Bajo Hotel

1.7 km from Labuan Bajo Port

Graham

￥1,886

￥2,331 total

includes taxes & fees

Sep 1 - Sep 2

A swimming pool with a lighthouse and boats in the background.

A hotel room with a bed, a desk, a TV, a chair, and a window with a view of a building.

A room with a wooden door, a small trash bin, a wooden desk with a chair, a sofa, and a window with curtains.

A modern hotel room with a large bed, two wooden chairs, a TV, and a painting on the wall.

9. Harbour Komodo Hotel

0.3 km from Labuan Bajo Port

Peter

￥7,402

￥8,956 total

includes taxes & fees

Sep 11 - Sep 12

A bedroom with a large bed, a desk, and a view of the outdoors.

A modern kitchen with a wooden countertop, a built-in sink, and a flat-screen TV mounted on the wall.

A bedroom with a large bed, wooden headboard, a nightstand, a dresser, a TV, and a view of the outdoors.

A room with a wooden bench, a refrigerator, a painting on the wall, and a coffee maker.

10. Komodo Suites Downtown

0.3 km from Labuan Bajo Port

Eliel

￥15,549

￥18,861 total

includes taxes & fees

Sep 13 - Sep 14

An outdoor dining area with wooden tables and chairs, overlooking a scenic view of the sea and hills.

A modern hotel room with a large bed, a TV, a sofa, and a view of the city.

A bakery with a display counter, shelves with baked goods, and a wall with inspirational quotes.

A modern living room with a large window, a sofa, two small tables, and a potted plant.

11. ZASGO HOTEL

0.9 km from Labuan Bajo Port

YASUHIDE

￥6,970

￥8,434 total

includes taxes & fees

Sep 14 - Sep 15

A garden pathway leading to a rustic wooden structure with a thatched roof.

A white building with wooden doors and windows, a covered porch, and a dirt path leading to a wooden bench.

A bedroom with a bed, a wooden door, a window, and a small table with a plant.

A bathroom with a toilet, sink, and shower.

12. Palulu Garden Homestay

0.3 km from Labuan Bajo Port

alexandru

￥1,814

￥2,260 total

includes taxes & fees

Sep 8 - Sep 9

A balcony with a view of a marina, boats, and a pier.

A modern lobby with seating, a reception desk, and a wall-mounted sign.

A modern bathroom with a white sink, mirror, and toilet.

A modern hotel room with a neatly made bed, a bedside table, a chair, and a desk with a mirror and toiletries.

13. Flamingo Ceria

0.2 km from Labuan Bajo Port

Reyna

￥5,451

￥6,724 total

includes taxes & fees

Sep 2 - Sep 3

A building with a balcony covered in hanging vines, a staircase, and a view of a body of water.

A reception desk at Komodo Lodge with a wooden backdrop, a TV screen, and a sign indicating the location of the toilet.

A coastal marina with boats, a lighthouse, and a pier.

A hotel room with a large bed, a desk with a chair, a small round table, a wooden bench, a window with curtains, and a door.

14. Komodo Lodge

0.4 km from Labuan Bajo Port

Anna

￥5,609

￥6,787 total

includes taxes & fees

Sep 4 - Sep 5

A two-story building with balconies, large windows, and a flat roof.

A bathroom with a sink, mirror, shower, and a blue door.

A bedroom with a wooden bed, a desk, and a view of a garden.

A hotel room with two beds, a desk, and a view of the outdoors.

15. Hotel Bonne Nuit

1 km from Labuan Bajo Port

Tereza

￥2,821

￥3,770 total

includes taxes & fees

Sep 28 - Sep 29

A circular pool with a tree in the center, surrounded by lush greenery.

A wooden cabin with a pitched roof, a front porch with seating, and a gravel pathway.

A bedroom with a large bed, a TV mounted on the wall, a wooden ceiling, and a view of greenery outside.

A row of bungalow-style cottages with pitched roofs, surrounded by a landscaped garden with pathways and small trees.

16. Tahoma Villas Labuan Bajo by ABM

2.9 km from Labuan Bajo Port

Mayra

￥9,994

￥12,092 total

includes taxes & fees

Sep 5 - Sep 6

A stone archway entrance to a building with a dining area visible inside.

A courtyard with a central fountain, surrounded by tropical plants and a building with a tiled roof.

A person sitting at a desk with a red VAIO laptop and a brochure.

A dining area with tables covered in white tablecloths, wooden chairs, and a tiled floor.

17. Komodo Boutique Hotel

2.8 km from Labuan Bajo Port

Ka Yee Starme

￥2,722

￥3,350 total

includes taxes & fees

Sep 29 - Sep 30

A pool area with multiple water features, surrounded by tropical vegetation and a view of the sea.

A pathway through a lush garden with palm trees and various greenery.

A modern hotel room with a large bed, a desk, and a view of the ocean.

An outdoor dining area with tables and chairs, surrounded by a wooden deck and a rope barrier.

18. Bintang Flores Hotel

1.8 km from Labuan Bajo Port

Heidi

￥11,680

￥12,965 total

includes taxes & fees

Sep 1 - Sep 2

Two wooden cabins with balconies, a swimming pool, and lush greenery.

A neatly made bed with white linens and pillows, a decorative swan pillow, and a woven headboard.

A long wooden table with various dishes and drinks, set in an outdoor area with bamboo plants and a view of the sea.

19. Pavilla Labuan Bajo

1.6 km from Labuan Bajo Port

Samuel

￥2,398

￥2,927 total

includes taxes & fees

Sep 3 - Sep 4

A bedroom with a bed, a wooden bench, a wardrobe, and a refrigerator.

A corridor with doors, windows, and chairs.

A bathroom with a wooden wall, a window with a view of trees, and a basket with toiletries.

A corridor with a high ceiling, chairs, and tables, suggesting a dining or lounge area.

20. Ocha Bajo Homestay

1.4 km from Labuan Bajo Port

"This was an excellent place to stay and amazing value for money - the room was spacious, and clean with a comfortable bed and air conditioning and a private bathroom The hostess, Ocha, couldn’t have been more welcoming and helpful and ready to assist with anything you might need. She provided a good breakfast (included in the price) and recommended a local driver who took me to a nearby cave for swimming on my last day then dropped me at the airport."

Ann

￥4,914

￥6,048 total

includes taxes & fees

Sep 4 - Sep 5

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Compare popular hotels close to Labuan Bajo Port

Property	Star rating	Guest rating
TA’AKTANA, a Luxury Collection Resort & Spa, Labuan Bajo	10.0 Exceptional 34 reviews	View
AYANA Komodo Waecicu Beach	9.6 Exceptional 120 reviews	View
Katamaran Hotel & Resort Komodo	9.4 Exceptional 95 reviews	View
Crowne Plaza Labuan Bajo by IHG	9.4 Exceptional 8 reviews	View
Meruorah Komodo Labuan Bajo	9.0 Wonderful 213 reviews	View

Top Labuan Bajo Port Hotel Reviews

Katamaran Hotel & Resort Komodo

10/10 Excellent

"This four night stay was amazing. The hotel is conveniently located close to the airport and the town with no noise from aircraft. The swimming pool near the main building was too cold as it did not get much sun but the one by the sea was a lovely temperature and the music was a chilled out vibe. Staff were always smiling and helpful, although checking in was far too slow and we had to spend a couple of hours in the restaurant from 3pm to 5pm before we could get into the room. However, this was made up for slightly with us being able to get late check out for one of our rooms so we could enjoy more of our last day. The rooms are spacious with good AC and water pressure in the showers was good too. Breakfast was varied with nice pastries and a crepe/waffle stand but no bacon which let down the english breakfast and the fruit could have been more varied. Coffee was great though. Would recommend this hotel for anyone wanting a relaxing time in Labuan."

AYANA Komodo Waecicu Beach

10/10 Excellent

"The snorkelling, reefs, and pool were amazing. The room was the most beautiful hotel rooms I’ve been in, with large baths and comfy beds."

Crowne Plaza Labuan Bajo by IHG

10/10 Excellent

"Great"

Hotel Bonne Nuit

8/10 Good

"This a conveinent place to stay that is 5 minutes away from the airport and about 25 to 28 minute walking distance from the main town area. It was a clean and friendly but did not have a way to heat things up which was a little disppointing when I asked for that service. Otherwise, decent stay"

Inn Room Hotel Bajo

8/10 Good

"The place was really small, I didn't mind it but just know it's basically the bed and a small desk area. The fragrance in the towels and bed sheets made me sick, really strong but then again I don't use scented laundry detergents at home. The free drink was horrible, really sugary wish I could have substituted it went to waste. I like that the bed was comfortable which is important to me when I'm traveling. The staff was super friendly and helpful. I chose a room with a window it would have been really claustrophobic feeling if I didn't."

Flamingo Ceria

8/10 Good

"Good deal for the price you are paying."

Seaesta Komodo Hotel & Hostel

10/10 Excellent

"It was an amazing over-night stay before our early-start trip to Komodo National Park. The room was fantastic; very clean; staff were extremely helpful and the food in roof-top bar was outstanding! We are 50-60 age group and found this hotel-hostel absolutely brilliant: highly recommend!"

ZASGO HOTEL

10/10 Excellent

"The hotel was a great base while we visited Komodo and nearby islands. It was quiet, well maintained and had a good pool."

LAPRIMA Hotel Flores

10/10 Excellent

"They need to fix of their swimming pool; some tiles were broken. The bridge also needs to be fixed, missing some part of wood."

Other attractions near Labuan Bajo Port

Waecicu Beach

8.2/10 (19 reviews)

Why not spend a carefree afternoon at Waecicu Beach during your travels in Labuan Bajo? Wander the gardens or discover the area's sunsets.

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Plaza Marina Labuan Bajo

You can do some window-shopping at Plaza Marina Labuan Bajo during your visit to Labuan Bajo. Stroll along the beaches or discover the area's sunsets.

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Pede Labuan Beach

8.2/10 (19 reviews)

If a restful vacation is part of your travel plans, Pede Labuan Beach might be the perfect place to seek out during your trip to Labuan Bajo. Wander the gardens or discover the area's sunsets.

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Batu Cermin Cave

8.6/10 (23 reviews)

Explore the great outdoors at Batu Cermin Cave, a lovely green space in Labuan Bajo. Wander the beaches and gardens in the area.

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Sylvia Hill

8.8/10 (3 reviews)

Commune with nature and explore the great outdoors at Sylvia Hill during your travels in Labuan Bajo. Stroll along the beaches or discover the area's sunsets.

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Frequently asked questions

What's the area like around Labuan Bajo Port?

Labuan Bajo Port is located in an area of Labuan Bajo that travelers like for its island views, beaches, and sunsets. If you're looking for a convenient place to stay, check out the 98 hotels and other accommodations you'll find within a mile.

What's the best place to stay near Labuan Bajo Port?

Adjacent to Labuan Bajo Port, Meruorah Komodo Labuan Bajo is one of the top choices for your stay based on our traveler data, and this hotel offers a marina and a full-service spa. Other good options within a short distance include Harbour Komodo Hotel and Seaesta Komodo Hotel & Hostel.

How many hotels will I be able to find near Labuan Bajo Port?

Expedia has 98 hotels and other accommodations within a mile from Labuan Bajo Port.

If I need to cancel the hotel reservation for my stay near Labuan Bajo Port, will I receive a refund?

Yes! The majority of hotel room reservations are fully refundable if you cancel prior to the accommodation's cancellation deadline, which is usually within 24-48 hours of your check-in date. If your reservation is non-refundable, you might be able to cancel it and receive a refund within a 24-hour period of your booking. Put your dates in and click on "Search", then you can filter by "fully refundable" to get the best deals available near Labuan Bajo Port.

Where can I learn more about changing or cancelling my trip in the area near Labuan Bajo Port?

For more details about changing or cancelling your stay near Labuan Bajo Port, go to https://www.expedia.com/service/.

What can I see and do near Labuan Bajo Port?

Lounge by the water at Pede Labuan Beach and Waecicu Beach. Explore nature at Batu Cermin Cave and Sylvia Hill. Rangko Cave is also located 7.3 mi (11.7 km) from Labuan Bajo Port, and Cunca Wulang Waterfall is 8.8 mi (14.2 km) away.

Find hotels near Labuan Bajo Port, Labuan Bajo from ￥2,260

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Treat yourself

Be picky

Check prices for these dates

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Our top choices for Labuan Bajo Port hotels

1. TA’AKTANA, a Luxury Collection Resort & Spa, Labuan Bajo

2. AYANA Komodo Waecicu Beach

3. Katamaran Hotel & Resort Komodo

4. Crowne Plaza Labuan Bajo by IHG

5. Meruorah Komodo Labuan Bajo

6. OhJulia Hotel Komodo

7. World BnB

8. Centro Bajo Hotel

9. Harbour Komodo Hotel

10. Komodo Suites Downtown

11. ZASGO HOTEL

12. Palulu Garden Homestay

13. Flamingo Ceria

14. Komodo Lodge

15. Hotel Bonne Nuit

16. Tahoma Villas Labuan Bajo by ABM

17. Komodo Boutique Hotel

18. Bintang Flores Hotel

19. Pavilla Labuan Bajo

20. Ocha Bajo Homestay

Compare popular hotels close to Labuan Bajo Port

Top Labuan Bajo Port Hotel Reviews

Katamaran Hotel & Resort Komodo

AYANA Komodo Waecicu Beach

Crowne Plaza Labuan Bajo by IHG

Hotel Bonne Nuit

Inn Room Hotel Bajo

Flamingo Ceria

Seaesta Komodo Hotel & Hostel

ZASGO HOTEL

LAPRIMA Hotel Flores

Other attractions near Labuan Bajo Port

Waecicu Beach

Plaza Marina Labuan Bajo

Pede Labuan Beach

Batu Cermin Cave

Sylvia Hill

Frequently asked questions