Yonaguni Vacations from ¥83,980

Book a Hotel + Flight or Car together to unlock savings

  • Plan, book, travel with confidence

  • Better together

    Save up to ¥109,000 when you book a flight and hotel together*
  • Find the right fit

    With over 300,000 hotels worldwide, it's easy to create a perfect package
  • Rest easy

    Plan, book, and manage your trip all in one place

The Latest Yonaguni Vacation Packages

Price found within the past 48 hours. Click for updated prices.
Sakura Cross Inn & Sauna Ishigaki

Sakura Cross Inn & Sauna Ishigaki

Misakicho
¥83,980
per person
Nov 3 - Nov 6
found 1 day ago
Roundtrip flight included
Tokyo (HND) to Ishigaki (ISG)
8.8/10 Excellent! (3 reviews)
We stayed for 2 nights and it was just perfect. If we travel Ishgaki again, we sure stay here again.

Reviewed on Jun 12, 2026

Jusandi

Jusandi

Save 100% on your flight
¥258,810
per person
Nov 3 - Nov 6
found 1 day ago
Roundtrip flight included
Tokyo (HND) to Ishigaki (ISG)
9.4/10 Exceptional! (16 reviews)
We loved the privacy. That is what you’re paying for here. You are completely away from the world in this little tropical dream. The pool was amazing. We also liked snorkeling at blue cave and didn’t mind that it seems to be used for tour guides. I felt better being in the ocean with a few people around. Then back to the solitude of our house. Of course there are spiders and other critters given that you are somewhere tropical. The house lizards were cute. Make sure to stock up on anything you want before your stay so you don’t have to leave. Oh, also the chef is amazing and will accommodate any dietary restrictions if you notify them with enough time.

Reviewed on Oct 9, 2025

Pine House in ISHIGAKI

Pine House in ISHIGAKI

Maezato
¥84,644
per person
Nov 3 - Nov 6
found 1 day ago
Roundtrip flight included
Tokyo (HND) to Ishigaki (ISG)
7.8/10 Good! (17 reviews)
チェックイン時から不愉快な経験をしました。 ①洗濯機上に使用済みバスタオル3枚 ②屋外の物干し竿に干したままのタオル1枚 ③洗濯機フィルターはゴミ詰まりで砂だらけ。 その不具合を連絡すると、その状況を画像を送れ、と。 事前評価で残置物コメントを拝見しながら、改善されてると思い予約しましたが、誠に残念な体験でした。 【不具合報告】 ・玄関インターフォン、壊れてます。 ・空気清浄機、壊れてます。 建物は奇麗ですが、監理体制が残念でなりません。

Reviewed on May 10, 2026

The BREAKFAST HOTEL MARCHE Ishigakijima

The BREAKFAST HOTEL MARCHE Ishigakijima

Okawa
¥89,588
per person
Oct 4 - Oct 7
found 1 day ago
Roundtrip flight included
Tokyo (HND) to Ishigaki (ISG)
8.6/10 Excellent! (606 reviews)
Positive things are the convenient location, easy checkin process, and the breakfast buffet. There was a noticeable odor both in the room, hallway, and lobby. I'm not sure if this is a cleanliness issue or just due to a lot of restaurants being nearby. Overall think it's worth staying a short while if you want to be in the center of downtown and want a hotel with a nice breakfast.

Reviewed on Aug 28, 2026

730HOTELS

730HOTELS

Okawa
¥119,200
per person
Nov 3 - Nov 6
found 1 day ago
Roundtrip flight included
Tokyo (HND) to Ishigaki (ISG)
4/10 (1 review)
設備の充実さ、清潔さ含めて全体的に満足度は高かったですが、以下の点が残念でした。 ・メインベッドルームのエアコンが電源をいれても運転せず、暑さもあり非常に寝苦しかった。 ・フリーフローの泡盛のうち1本が開封済みで半分以下の残量でした。 ・7名で利用したが、アメニティが6名分しかなく、残念でした。 ・サウナ横の水風呂に設置の冷凍庫内にある保冷剤が冷凍庫内で結露水が凍っている状態で半分以上取り出せなかった。

Reviewed on Dec 22, 2025

Find the Best Yonaguni Vacation Packages

Yonaguni Beach Vacation

Take a break from the stresses of daily life and let yourself relax on your Yonaguni vacation. There's nothing more invigorating than the smell of salty sea air and the sound of waves lapping at the shore. Plan your trip to Yonaguni the quick and easy way by locking in one of our Yonaguni packages. Many travelers opt to stay near Hikawa Beach, a must-see only 2 kilometers from the downtown area.

Yonaguni Hotel Deals

Yonaguni Hotel Mumbu Sonai

Yonaguni Hotel Mumbu Sonai

Yonaguni 355-1 Yonaguni Okinawa
¥8,222
¥9,044 total
Sep 30 - Oct 1
7.4/10 Good! (40 reviews)
"It has all needed amenities with a very cheap price, and offering shuttle from/to airport"

Reviewed on Feb 28, 2026

Yonaguni Hotel Mumbu Sonai
MUMBU STAY Nantahama Beach

MUMBU STAY Nantahama Beach

218 Sonai Yonaguni Okinawa
Fully refundableReserve now, pay when you stay
¥16,842
¥18,535 total
Sep 18 - Sep 19
8.4/10 Very Good! (46 reviews)
"No complaints would use the place again"

Reviewed on Apr 17, 2026

MUMBU STAY Nantahama Beach
Yonaguni Hotel Mumbu Higawahama

Yonaguni Hotel Mumbu Higawahama

3112-1 Yonaguni Okinawa
¥12,541
¥13,809 total
Sep 10 - Sep 11
Yonaguni Hotel Mumbu Higawahama
See all 6 properties in Yonaguni
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Stay near popular Yonaguni attractions

Marker for the Westernmost Point of Japan

Learn about the local history of Yonaguni when you spend time at Marker for the Westernmost Point of Japan. Stroll along the beaches or discover the area's coral reefs.
See properties

Hikawa Beach

Why not spend a carefree afternoon at Hikawa Beach during your travels in Yonaguni? Discover the coral reefs while you're in the area.
See properties

Cape Irizaki

Find out about the history of Yonaguni with a stop at Cape Irizaki. Stroll along the beaches or discover the area's coral reefs.
See properties

Nama hama Beach

Why not spend a carefree afternoon at Nama hama Beach during your travels in Yonaguni? Discover the coral reefs while you're in the area.
See properties

Nanta Beach

Why not spend a lazy afternoon at Nanta Beach during your trip to Yonaguni? Wander the beaches or discover the area's coral reefs.
See properties

Dannu Beach

Why not spend a lazy afternoon at Dannu Beach during your trip to Yonaguni? Wander the beaches or discover the area's coral reefs.
See properties

Dr. Koto Clinic Filming Site

Enjoy an outing to Dr. Koto Clinic Filming Site during your stay in Yonaguni. Stroll along the beaches or discover the area's coral reefs.
See properties

Kataburu Beach

Why not spend a lazy afternoon at Kataburu Beach during your trip to Yonaguni? Wander the beaches or discover the area's coral reefs.
See properties

Frequently asked questions

How much does a Yonaguni vacation package cost?
You'll find cheap prices from ¥83,980 on Expedia for your Yonaguni escape. However, factors like the length of stay, hotel choice and season will influence how much your vacation to Yonaguni costs.
What are the cheapest months to go to Yonaguni?
The off-season is the best time to travel to Yonaguni if you're on a budget. Another tip for finding cheap Yonaguni vacation packages? Try to avoid visiting during public holidays and any major festivals or events.
How many days is enough for Yonaguni?
The ideal length of your Yonaguni vacation depends on what you'd like to do. Usually, a few days to a week will give you enough time to visit all the main sights and discover some hidden spots along the way.
Is it worth booking a vacation package to Yonaguni?
Yonaguni is a good vacation destination with attractions like Dannu Beach among the many things to keep you busy. Whether you're traveling with the family or planning a trip with friends, a Yonaguni vacation promises a good time for everyone.
How to find the best Yonaguni package deals?
Use Expedia's filters to help you find some terrific Yonaguni package deals. When you start your search, just set your maximum budget and then sort the results by "Price: low to high." If you want to save, plan your break for midweek, or browse for Yonaguni package deals in the low season. Switch up your travel dates and you may land even better discounts. As a rule of thumb, it's typically best to lock in your vacation package as early as possible.
Is it cheaper to book a Yonaguni vacation as a package?
Expedia vacation packages are designed to give you more bang for your buck. Bundle your flight, car rental and hotel into one great-value price and you could save hundreds of dollars. You'll typically land a better deal than booking each component separately. And you'll still enjoy the flexibility to create a customized Yonaguni vacation by choosing your favorite accommodation type, airline and car class.
When to book a vacation package to Yonaguni?
If you've got your Yonaguni travel dates finalized, book as early as you can to bag some unbeatable deals. With Expedia, you can generally reserve some flights up to one year in advance. Prefer spur-of-the-moment trips? Our last-minute deals are great for impromptu escapes.
How to plan a trip to Yonaguni?
  1. Choose when to go: Check your diary and get your bags packed. Your preferred time of year and the available activities will also help you decide when to vacation in Yonaguni.
  2. Plan your budget wisely: As well as the price of your accommodations, you'll need to consider other expenses too. These include flights, transportation and food. Also, put aside a little extra for unexpected expenses that may crop up during your trip to Yonaguni.
  3. Decide how long to go away for: Now that you're more familiar with Yonaguni, you can work out the perfect length of your vacation. Put together a draft itinerary and give yourself enough time to cover everything you want to do.
  4. Bundle your bookings: With your travel dates in order, you can combine your hotels, flights, car rental and more into a personalized Yonaguni vacation package.

Explore a world of travel with Expedia

* Savings based on package bookings compared to the price of the same components booked separately. Savings not available on all packages.