A river winding through a lush green landscape with patches of water bodies and a bridge crossing the river.

Find hotels in Niobrara, NE from ￥12,284

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Check prices for these dates

Tonight
Sep 14 - Sep 15
Tomorrow
Sep 15 - Sep 16
This weekend
Sep 18 - Sep 20
Next weekend
Sep 25 - Sep 27

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Our top choices for Niobrara hotels

A spacious kitchen with a large island, modern pendant lights, and a ceiling fan.
A modern kitchen with stainless steel appliances, dark wood cabinets, and a tiled floor.
A modern kitchen with dark cabinets, stainless steel appliances, and a large window.
A spacious room with wooden walls and ceiling, featuring a large chandelier, multiple windows, and a central seating area with tables and chairs.

1. Lewis and Clark Resort

Lewis and Clark Resort
Yankton
United States
Melissa
￥11,622
￥12,284 total
includes taxes & fees
Oct 4 - Oct 5
Lewis and Clark Resort
A hotel entrance with a covered patio, brick facade, and a sign reading "Wagner Lakeside Motel".
Two beverage vending machines, one for Coca-Cola and one for Pepsi, in a hallway.
A reception area with a wooden counter, potted plants, a clock, and a door marked "Employees Only".
A hotel room with a large bed, a bedside table with a lamp, a small nightstand, a bathroom with a bathtub, and a chair.

2. Wagner Lakeside Motel

Wagner Lakeside Motel
Wagner
United States
Marlys
￥15,822
￥16,962 total
includes taxes & fees
Sep 15 - Sep 16
Wagner Lakeside Motel
A grand staircase with wooden railings and a red flag, leading to a room with a patterned ceiling and string lights.
A bed with a metal headboard, two pillows, a bedside table with a lamp, and a window with curtains.
A bedroom with a bed, a bedside table, a lamp, and a mirror.
A bedroom with a bed, bedside table, lamp, and a window with blinds.

3. The Historic Argo Hotel

The Historic Argo Hotel
Crofton
United States
Deborah
￥23,185
￥25,967 total
includes taxes & fees
Oct 15 - Oct 16
The Historic Argo Hotel
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Stay near popular Niobrara attractions

Niobrara State Park

10.0/10 (3 reviews)
Perched at the confluence of the Niobrara and Missouri rivers, this park offers tranquil wilderness exploration. Reserve a cabin or join summer buffalo cookouts with live entertainment under starlit prairie skies.
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Learn more about Niobrara

Paddle down the scenic Niobrara River in a kayak or join a guided tubing adventure past dramatic sandstone cliffs. Visit Smith Falls State Park nearby to see Nebraska's highest waterfall and hike through lush forest trails.

See all hotels in Niobrara
Rolling hills, green fields, scattered trees, and a few buildings in the distance.
Photo by Nebraska Tourism

Top Niobrara Hotel Reviews

Wagner Lakeside Motel

Wagner Lakeside Motel

10/10 Excellent
"Comfortable bed, good a/c, clean bathroom, friendly staff!!"
Victor 3-night trip
Posted 4 days ago
Wagner Lakeside Motel
Modern Lewis and Clark lake home with lake views and 3 min drive to the beach!

Modern Lewis and Clark lake home with lake views and 3 min drive to the beach!

10/10 Excellent
"Everything was great!"
Brenna J. 3-night trip
Posted 6 days ago
Modern Lewis and Clark lake home with lake views and 3 min drive to the beach!
Fully furnished lake house with cozy spaces, full kitchen, and lake views.

Fully furnished lake house with cozy spaces, full kitchen, and lake views.

10/10 Excellent
"Great location to host our company retreat! The house was spacious and offered plenty of room. Appreciated all the outdoor chairs available to use. We enjoyed sitting around the outdoor firepit at night."
Katie K. 3-night trip
Posted 6 days ago
Fully furnished lake house with cozy spaces, full kitchen, and lake views.
The Historic Argo Hotel

The Historic Argo Hotel

10/10 Excellent
"The current owners have only had the property for the past year and are working hard to keep it going. They have added daily lunch and dinner menus and we enjoyed dinner during our stay as well as breakfast. Very personable hosts who are eager to please their guests, They intend to be open daily year round so give The Argo a try!!!"
Deborah 1-night trip
Posted 6 days ago
The Historic Argo Hotel
Newly Remodeled Creekside Bungalow on 3 acres with private Beach/Creek access

Newly Remodeled Creekside Bungalow on 3 acres with private Beach/Creek access

10/10 Excellent
"Thank you for a pleasant short stay. Very nice place and location. Would stay again."
Kimberly 1-night trip
Posted 7 days ago
Newly Remodeled Creekside Bungalow on 3 acres with private Beach/Creek access
Haven by the Lake

Haven by the Lake

10/10 Excellent
"Amazing place to stay at, great access to the water, lots of space, overall great experience!"
Madisyn P. 2-night trip
Posted 13 days ago
Haven by the Lake
Hunters & outdoor lovers charming 4-bedrm house - best Lewis & Clark lake view!

Hunters & outdoor lovers charming 4-bedrm house - best Lewis & Clark lake view!

10/10 Excellent
"This property was amazing! Unbelievable views, well maintained, super clean and the hosts were amazing. Will be staying again!"
Scott A. 3-night trip
Posted 13 days ago
Hunters & outdoor lovers charming 4-bedrm house - best Lewis & Clark lake view!
Spacious Lakeview Cabin Minutes from Private Beach

Spacious Lakeview Cabin Minutes from Private Beach

10/10 Excellent
"Lots of room for sleeping - open spacious living room with a beautiful lake view."
Kaylee O. 3-night trip
Posted 3 weeks ago
Spacious Lakeview Cabin Minutes from Private Beach
Family, friendly country farm home. Enjoying peace and quiet.

Family, friendly country farm home. Enjoying peace and quiet.

10/10 Excellent
"This house had everything we needed for our family’s stay. The kids really enjoyed the garage space. So many things to keep them entertained. House was very clean and AC worked great! So convenient that each family had their own bathroom. Beautiful view from the deck with morning coffee."
Ann B. 2-night trip
Posted 1 month ago
Family, friendly country farm home. Enjoying peace and quiet.

More cheap stays in Niobrara

Lewis and Clark Resort

Lewis and Clark Resort

43496 Shore Drive Yankton SD
￥11,622
￥12,284 total
Oct 4 - Oct 5
includes taxes & fees
Lewis and Clark Resort
Wagner Lakeside Motel

Wagner Lakeside Motel

710 W Hwy 46 Wagner SD
￥15,822
￥16,962 total
Sep 15 - Sep 16
includes taxes & fees
6.6/10 (190 reviews)
Wagner Lakeside Motel
Fort Randall Casino Hotel

Fort Randall Casino Hotel

38538 US Highway 46 Lake Andes SD
Get rates
7.6/10 Good! (10 reviews)
Fort Randall Casino Hotel

Frequently asked questions

Where is the best place to stay in Niobrara?
Lewis and Clark Resort, located 26.9 mi (43.3 km) from the heart of Niobrara, is a top choice for your stay based on our traveler data. Other good options for your trip to the area are Wagner Lakeside Motel and The Historic Argo Hotel. See all available top hotels, or vacation rentals in Niobrara.
What's the top vacation rental in Niobrara?
Newly Remodeled Creekside Bungalow on 3 acres with Private Beach Beside Creek: This vacation home near Niobrara is located in a rural location and offers a barbecue grill, air-conditioning, and free WiFi to help you feel perfectly comfortable in your new surroundings. Kitchen amenities include a fridge, a stovetop, and a microwave. See all vacation rentals in Niobrara.
If I need to cancel my hotel reservation in Niobrara, will I receive a refund?
Yes! The majority of room reservations are fully refundable if you cancel prior to the hotel's cancellation deadline, which in most cases is within 24 or 48 hours of check in. If you have a non-refundable reservation, it might still be possible to cancel it and receive a refund within a 24-hour period of booking. Filter your search by fully refundable to find flexible hotel deals in Niobrara.
Where can I learn more about changing or cancelling my trip to Niobrara?
To access more information about picking new dates or cancelling your trip to Niobrara, click here.
What's the best pet-friendly hotel in Niobrara?
Private updated hunting lodge/farmhouse is a top dog-friendly country house, and offers in-room kitchens for its human guests. See more pet-friendly hotel accommodations in Niobrara.
What are some accommodations with pools in Niobrara?
Lewis and Clark Resort: Offers free self parking, a seasonal outdoor pool, and complimentary wireless internet access. View all hotels with pools in Niobrara.
What is the best hotel near Sioux Falls Regional Airport (FSD)?
AeroStay Hotel is a popular hotel, featuring free breakfast and free WiFi. It's located a short 0.1 mi (0.1 km) from Sioux Falls Regional Airport. Other good options close to the airport are Ramada by Wyndham Sioux Falls Airport Hotel & Suites and AmericInn by Wyndham Sioux Falls North.
How is it to stay in Niobrara?
Travelers to Niobrara will find plenty to explore and enjoy. In Niobrara, there are 6 hotels and other accommodations to choose from. Find out more about Niobrara.
What is there to see in Niobrara?
Natural beauty is on display at Lewis and Clark Lake, Niobrara River, and Missouri River. Additionally, you might want to add Niobrara State Park to your itinerary. Check out what more to see and do in Expedia's Niobrara guide.
What's the weather like in Niobrara?
The hottest months are usually July and August with an average temp of 72°F, while the coldest months are January and February with an average of 27°F. The snowiest months in Niobrara are December, January, March, and February, with each month seeing an average of 7 inches of snowfall.

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