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Find Boutique Hotels in Fernandina Beach, FL

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Check availability on Fernandina Beach Boutique Hotels

Tonight
Dec 30 - Dec 31
Tomorrow
Dec 31 - Jan 1
This weekend
Jan 2 - Jan 4
Next weekend
Jan 9 - Jan 11

Our top choices for Fernandina Beach boutique hotels

Exterior
Elizabeth Pointe Lodge

Elizabeth Pointe Lodge

Elizabeth Pointe Lodge
3.5 star property
Fernandina Beach
9.0 out of 10, Wonderful, (505)
"Excellent location and staff"
United States
Henry
The price is ￥32,235
￥42,218 total
includes taxes & fees
Jan 1 - Jan 2, 2026
Elizabeth Pointe Lodge
Outdoor pool
Hoyt House Amelia Island

Hoyt House Amelia Island

Hoyt House Amelia Island
3.5 star property
Fernandina Beach Historic District
9.4 out of 10, Exceptional, (572)
"Great place near downtown district."
United States
Sandra
Hoyt House Amelia Island
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
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Top Fernandina Beach Hotel Reviews

Hampton Inn and Suites Amelia Island Historic Harbor Front

Hampton Inn and Suites Amelia Island Historic Harbor Front

10/10 Excellent
"Every "
BRENDA 1-night trip
Posted 4 days ago
Hampton Inn and Suites Amelia Island Historic Harbor Front

Frequently asked questions

What's the best boutique hotel in Fernandina Beach?
Elizabeth Pointe Lodge is a favorite B&B with our travelers looking for a stylish accommodation, and features 25 guestrooms, an ocean-view restaurant, and free parking. If you want to stay at a boutique hotel, you can also take a look at Hoyt House Amelia Island.
What's there to see and do in Fernandina Beach?
Visitors speak positively about this destination's breathtaking beach views, interesting historical sites, and beautiful island views. Activities and attractions to experience around Fernandina Beach include Amelia Island Lighthouse, Fort Clinch State Park, and Fernandina Beach. For even more to see and do, make a stop at American Beach, Omni Amelia Island Resort Golf, and Amelia Island State Park.
What kind of weather should I plan for when I travel to Fernandina Beach?
Understanding the weather in Fernandina Beach is important when you plan your trip. The hottest months are usually July and August with an average temp of 81°F, while the coldest months are January and February with an average of 60°F. Average annual precipitation for Fernandina Beach is 51 inches.
What's the best way to get to my boutique hotel in Fernandina Beach?
You have a few options for transportation to and around Fernandina Beach. The nearest major airport is Jacksonville International Airport (JAX), which is located 18 mi (29 km) from the heart of the city. If you'd like to explore around the area, you may want a rental car for your journey.